Monodelphis domestica (gray short-tailed opossum): 100014173
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Entry
100014173 CDS
T01031
Symbol
UTP20
Name
(RefSeq) UTP20, small subunit processome component
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdo03009
]
100014173 (UTP20)
Ribosome biogenesis [BR:
mdo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100014173 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
100014173
NCBI-ProteinID:
XP_007503368
Ensembl:
ENSMODG00000003141
LinkDB
All DBs
Position
8:80903021..81004248
Genome browser
AA seq
2797 aa
AA seq
DB search
MKPKPFAHKTENTYRFLTFAERLGNVNIDIIHRIDRTGSYDEEVETYFYEGLQKWRELNL
TEHFGKFYKEVVGKCQSFNQLVYHQKEIVQSLKTHLQIRHSLAYQPLLDLVVQLARDLQT
DFYPNFKDFFLAITAILETQDTELLEWAFTSLSYLYKYLWRLMVKDMPDIYSLYSTLLAH
HKPHIRNFAAESFTFLMRKVSDQDSLFNLMFLDLGNHPTKVEGVGQLLFEMCKGVRNMFH
SCASKAIKVILRKLGPVTETKTQLPWDLVAGALRQMIKSSAAYVYKDHFGVLWECLQESL
LELQEKMAKPRGSGRSDQMERLLQIYLILVRHASGSKVAQPEGVCTIILQTFSIPGLSTS
CRKTLLEVISALTLGENVSLPETLVRKTVEKTFESGFERHLIFDFSKVMFAMKQFELLFL
PTFLEYVENCFLTDDAAAKDEALAILAKLILNKAPPPTIGSMAIEKYPLTFKARPAGPRT
RQKKTRTIGESEQLPVLGHILSLLQLPVNRGISASLSCPWAALIVLPHLRPMEKENLVPL
VTKFIDSFFAAVDEGSVGKGDFFILCQAVNTLLSLEESSKILQLVPVERVKKMLEMFPVE
PSILLLADLYYQRLSLSGCKEPLSEETLMTLFVSLQANISTGVSKIRLLTLRILNHFEMQ
LPATMEDDGLGEHQSIFATLLQAELVPATVNDYREKLLHLRKLRHDLVQASIPKGPLHEV
PLRYLLSMLYINFSALWDPVIELIASHANEMDNKEFWKVYYEHLERAATRAEKELQNDSR
DKHFRDKGVEKTETGDVGALYHEQLEQRTDCRERLDHTNFRFLLWKALAKFPERVEPRSR
ELSPLFLRFINNEYYPADHQIAPTQDLLKKGGAASEEEREEGSPAEGPEGAGEEEELADD
TVVLGFRKKKTRRAAAKQLIAHLQVFSKFLNPRSLYLESQLYDLYLQLLLHPEQDVQKIA
LECIMTYKHPHILPYKENLQRLLEDKSFKEEIVHFSISEENTIVKTAHRADLFSVLLRIL
YGRMKNKTGSKTQGKSASGTRMSIVLRFLAGSSPEEVHMFLDLLFEPVKHFRNGSCHSAV
LQAVQDLDLSRVIPLGRQHGVFNSLELVLKNIGHLISPYLPEILQILLCMTATVSHILHQ
REKVQLRVINPLKNLRRLGLKLVDEFFSEQESYDFSTEEINAVFQGAVWPQITRLASESQ
YSPTLLLKLIHTWSKNPRYFPLLAKQKPGDPEYDILKNVFAVLSAKIISETTTSVVMDIA
DNLLNIPDFEPTDTVSNLPVTGCVYTEITENIDESISLGGRLMLPQVPAILQYLSRTMVN
VEKVKKKKYRAQLSKELGILSRISKFMKDKEQSSLLITLLLPFLHRSNIAEDTEIDILVT
VQNLLANCQDPASFLKPLSRLFSVIQSKMSRQMLCSVFQTLSDYESGLEYITEVVKLNAF
DQRHLDDINFDVRLSAFQKITSHIKEMETVDITYLIPVMHNCFYTLQLKDMALSDSASLC
LVSIIHRLAAPDVTEAQYREVIQRTLLENLRRGLKSPTESIQQEYTTLLSSLIQTFPNHP
EFKDLVQLSDFNDPEMDFFENMKHIQIHRRARALKKLGKRLMEGRIVLSSKSLQNYIMPY
ATTPIFDEKMLKHENITTASMELIGAICRHLSWAGYMYYLKYFIHVLHTGQINQKLGVSL
LVTVLEAFHFDHETLEKQMEKIKNEENTDVMEVDVSLEHEAMELDQANEEEKEEEEKKKS
LSDASEGLALEASATEPEDVVQAFSGLPQNKEELENLIKQIHKTITSSILPKLHKCLSAT
TKREEEHKLIKSKVVNDEEIVRIPLAFAMVKLMQSLPQGVMEANLPSILLKVCTLLRNRA
QEIRDVARNTLTKIIETLGVHYLQYILKELQTTLVRGYQVHVLTFTIYILLKGLANSLKV
GELDPCLDIMIGVFNHELFGSVAEEKEVKGIISKVMEARRSKSYDSYEILGKFVGKDQVT
KLILPLKEILQNTTSLKLARKVHEALRRIVAGLIANEEMTAEAILLLSYGLVSENLPLLT
EKEKSQAEPPPDPRLPPKSCLLLPPTPGRGGQKAAVSRRTNMHIFVECGLRLLHMSLKRS
KVNSSDDHVLEMLDPFMSLLIDCLKSRDAKVITGALQSLIWVLKFPLPSIGKNSEKLTKQ
LFLLLKDYARLGAAKGQNFHLVVNCFKCVTILVKKVKCYKITEKQLQVLLAYAEEDIYDS
SRQATAFGLLKAILSRKLMVPEIDDVMKKVSQFAITGQSEPVRVQCRQVYLKYILDYPIG
SKLKSNLEFMLAQLNYDYEAGRESALEMIAHLFQTFPQGLLHENCGLFFVPLCLMMINDN
STKCKKMASMAIKLLLSKVSLENKDLMYVLVVKWFGSQKSLQKRLAAQTCGLFVETEGAA
FERRFGTVLPIIERELEPSQLRDLIEETDEKASDRLLFGFLTLITKLIKESNFLQLTKHP
ESLNNIWSHIQSHLSHPHSWVWLTSAQIFGLLFASCKPEELIKRWAAQKSKKKQSGPVAV
TFLTKELDQKMKRLALAFCYQLQSKFLDQSLGEQIVKNLLFVAKVIYLLALHKEEKEVPS
EESMETPAPETSQTTGPEDDAGHAREASDDENEAAEEKVGAEEDQGRPANLFWLIHKLSI
MAKREAAYSPKNPLKRTCVFKFLGALAIDLGPDKVRPFLPMILAPLFRELNSTYSEQDPS
LKNLSQEILELLKKMVGLEAFSLAFASVQKRAREKRALRIKRKALQFVTNPDIAAKKKMK
KHKNKSEAKKRKIEFLRPGYKAKRQRSHGLRDLAMVE
NT seq
8394 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaaccatttgctcacaagacggagaatacgtaccggttccttacctttgct
gaacgtcttgggaatgtcaatattgatatcatccatcggattgataggactgggagttat
gatgaggaagtagaaacctacttttatgaaggactacagaaatggagagaattgaacctc
acagagcattttgggaaattttacaaagaagttgttggcaaatgtcagtcattcaatcag
ttggtttaccatcagaaagagattgtccagagcttaaagacccacctgcagatcaggcac
agcctggcctatcagcccctcttggacctagtggttcagttggctcgggatttgcagact
gacttctatccaaattttaaagattttttcctggccatcacagcgatcctagagacccag
gacacagagttattagagtgggcttttacctccctctcttacctttataaatacctatgg
agacttatggtcaaggacatgccagatatatacagtttatacagcaccctgctggctcac
cacaaaccacatataaggaattttgcagcagaaagctttacatttttgatgagaaaggtt
tctgatcaagacagcctctttaatttaatgtttcttgatcttggcaaccatcccacaaaa
gtagaaggcgttggacagttactttttgaaatgtgcaaaggagttagaaatatgttccac
tcttgtgcatccaaggcaatcaaagtaattctaagaaagcttggcccagtaactgagacc
aaaacccagttgccatgggacctggtggcaggtgctctcaggcagatgataaagtcttct
gctgcctatgtctacaaggaccattttggagtgttgtgggaatgtttgcaggaatcgctg
ctggagctccaggagaaaatggccaagcctcgtggctctggccgttcggaccaaatggag
aggctgctgcagatctacctcatcctggtgagacatgccagtggctctaaggtcgctcag
cctgaaggagtgtgtacgataatactgcaaacattctccattcctggtctctccacatct
tgccggaagaccctacttgaggtgatttctgctttgaccctgggtgaaaacgtttccttg
ccagagacccttgtccgaaaaacagttgaaaagacttttgaaagtggttttgaaagacat
ttgatttttgatttctccaaagtgatgtttgctatgaaacagtttgaactgcttttcctg
ccgaccttcttggagtatgttgagaactgcttcttgactgatgatgctgcagccaaagat
gaggccttggccatcctggcaaagctcattctaaacaaagctccaccacccaccattggt
tccatggccattgagaagtaccccctgactttcaaggcaaggcctgcaggaccccggacg
agacagaagaaaaccagaacaattggagagtcagaacagctgccagttctgggtcatatt
ttgtccctcctccagttaccagtgaacagaggcataagtgcttctctttcttgtccttgg
gcggccctcatagtgctgcctcatcttcgcccaatggagaaagagaaccttgtgcctctg
gtcacaaaattcatagactccttctttgcagctgttgatgaaggaagtgttggtaaagga
gacttctttatcctgtgccaggcagtaaatactctgctaagtttagaagagtcttccaaa
attctccagttggttcctgtggaacgagtgaagaaaatgttggagatgttcccagtggag
ccttccatcttgctgctggccgatctctattatcagcgattatctttgtctggttgtaaa
gagcctctctctgaagagactttaatgaccttatttgtcagtctgcaagcaaatatctca
accggtgtatccaagattcgacttttgaccctaagaatcctaaaccactttgaaatgcag
cttcctgcaacaatggaggatgatgggctaggggaacaccagtctatttttgccacattg
ctacaagccgaacttgttccagcaactgtgaatgattatagggagaaacttctgcatttg
agaaagctaagacacgacctggttcaggcatccatccctaaaggacctttacacgaggtc
ccacttcgttatttactgagcatgctgtatattaatttcagtgctctctgggatcctgtc
attgagctcatagcttctcatgccaatgaaatggataacaaagagttctggaaagtctac
tatgaacatttagagagagctgctacacgtgctgagaaagaattacagaatgattccaga
gataaacattttcgagataaaggtgttgagaagactgagacaggagatgtgggtgccctt
tatcatgaacagctggagcaaagaactgattgcagggagaggctggaccacaccaacttt
cgctttttgctctggaaggccctggcaaaattcccggagagagttgagccccggtcccga
gaactctccccacttttcctgaggtttatcaacaatgagtattatccagctgatcatcag
atcgcccctacccaggatctcctaaagaaaggcggtgcagcttctgaggaagaaagagag
gaggggagccctgcggagggccccgaaggggctggggaagaggaggagctggctgatgac
actgtggtgctcgggttccgaaagaagaagactaggagggctgcagccaagcaattaatt
gctcacctgcaggttttctcgaagtttttaaatccacgatccttatatctggaatcccag
ttatatgacctgtatctgcagttattattgcatcctgaacaagatgtgcaaaaaatagcc
ctggagtgcatcatgacctataagcacccccacatacttccctacaaggagaatttgcaa
aggttattggaagacaagagctttaaagaagaaattgtccattttagcatttcagaggag
aatacaattgtgaaaacagctcacagagctgatcttttttcagttcttctaagaattctt
tatggacgaatgaaaaacaagactgggagtaaaactcagggcaagtcagcctctggcaca
cgcatgtcgattgtcttgcggtttctcgcggggtcatcacctgaggaggtccacatgttc
ttagacctgctatttgagcctgtgaagcacttcagaaatggctcttgccactctgcagtt
ttgcaagcagtacaagacttggatttgtccagagttattcccttgggtcgtcagcatggt
gtcttcaatagtctggagctggtgttaaagaatattggtcacctgatcagcccctactta
cctgagattctgcagatcctgctctgtatgacagcgactgtgtcccacatccttcatcag
agagagaaggtacagctgagggtcatcaatcccctaaaaaatctgaggcgccttgggctc
aagctggtagatgagtttttttctgagcaggaatcatacgacttcagcacagaagaaatc
aatgctgttttccaaggtgctgtttggcctcagatcaccagacttgcatctgagagccag
tattcaccaactcttctactgaaacttattcatacttggagcaaaaatcccaggtacttc
cctttgctggctaaacagaaacctggggatccagagtatgacattctcaaaaatgtattt
gctgttctctcagccaagatcatttctgaaactacaaccagtgttgtaatggacatagct
gacaacctcctcaacataccagattttgaacccacagacacagtgtcgaacctgcctgtg
actggatgtgtttataccgagataacagaaaatatagacgagtccatcagtctgggtgga
aggctgatgctgcctcaggtgcctgccatccttcagtatctcagcagaaccatggtcaat
gtcgagaaggtgaaaaagaagaagtaccgggctcagctgagcaaggaactcggcatcctc
tctaggatcagcaagtttatgaaagacaaagagcagagctccctcctcatcactctgctc
cttcctttcctgcaccgaagcaacattgctgaggacactgagattgacatcctcgtgact
gtgcaaaatttgttagcgaattgtcaggacccggcgagtttcctgaaacctctttcaaga
cttttttctgtcattcagagcaaaatgtcccgacagatgctctgttcagttttccagaca
ctttctgattatgagagtggattggaatacattacagaagtagtcaagttgaatgccttc
gatcagagacacctggatgacatcaactttgatgttcgcttgtcagctttccaaaaaatc
acttctcacatcaaggagatggaaactgtagatatcacctacttaattcctgtaatgcac
aattgtttctacacgttacagctcaaagacatggccttgagtgacagtgccagtctgtgc
ttggtgagcatcatccatcggcttgcggctccagatgtcactgaggcccagtaccgagaa
gtcattcagcgtaccctcttggagaatttgaggagaggcctgaagagtccgactgagagt
atccagcaggaatatacaacattactttcctctttaattcaaacttttcccaaccaccca
gaatttaaagacttagttcaacttagtgacttcaatgaccctgaaatggacttttttgag
aacatgaagcacattcagatccacagaagggccagagccctgaagaaattaggcaagcgt
ctgatggagggcagaattgttctgtcttccaagtctctccagaattacatcatgccctat
gccacaacaccaatttttgatgagaagatgcttaagcatgaaaacataacaacggcttcc
atggagcttattggagctatttgcagacatctttcctgggcaggatatatgtattacttg
aaatatttcattcatgttttgcacactggacagattaatcagaagttgggtgtcagcttg
ttagtcacagtattagaagctttccactttgaccatgaaactcttgagaaacaaatggaa
aaaattaagaatgaagaaaatacagatgtaatggaggttgatgtgtccttggaacatgaa
gccatggaattggaccaagccaatgaagaggaaaaggaggaggaagagaagaagaagagt
ttgtctgatgccagtgaggggttggccctggaggcttctgccacggagcctgaggatgtt
gtccaggccttttctggcctccctcagaataaagaagagctagagaatttgatcaagcag
attcacaaaaccataaccagcagcattctccccaagctccacaaatgcctttctgccacg
actaaaagggaggaagaacacaagctcatcaagtccaaggttgtcaatgatgaagagatc
gttcgaattccattggcttttgccatggtcaaactcatgcagtctctgcctcaaggagta
atggaagccaatctgccaagtattttgctgaaagtgtgtactctcctgaggaacagagcc
caggaaatccgtgatgttgcacgcaataccctcacaaaaataatagagaccttgggtgtg
cattatctacaatacattttaaaagaattacagaccacccttgttcgaggatatcaggtt
cacgtgctcacatttacaatatacatcttgctgaaaggtcttgccaatagcctaaaagtt
ggagagctggatccttgcctggacatcatgattggggtctttaaccatgagctgtttggc
agcgtcgccgaggagaaggaggtaaaggggatcatctccaaggtcatggaggctcgacga
agcaaaagctatgattcctatgaaattcttggcaaatttgttgggaaagatcaagttacc
aagctcatccttcccctaaaagagattttacagaacaccacaagtcttaaactggcccgg
aaagtacacgaggccttacgccgcattgtagcaggcctgatcgcaaatgaggaaatgact
gctgaggctatcctgctgctcagctatgggctggtcagtgagaacctccctctgttaaca
gaaaaggaaaagagtcaagctgagccccctcctgatccccgcctgccccctaagagctgc
ctcctgctgccacctacccctggccgaggagggcagaaagctgctgtgagccgaaggacc
aacatgcacatatttgttgaatgtggactccggctgttacacatgagcctcaagaggtca
aaggtcaactcctctgacgatcatgtgctggagatgttggatcctttcatgtcattgctc
atcgattgcctcaagtccagagatgccaaggtcatcacaggtgctttacagtctctaatc
tgggtgttgaagttccccctgccttccatagggaagaactcggagaaacttactaagcag
ctcttccttctgctgaaagactatgccagacttggggctgccaaaggccagaacttccac
ttggttgtaaactgtttcaagtgtgtgaccatccttgtgaagaaggtcaaatgctacaag
atcacagagaaacaactccaagtcctgctggcctatgctgaggaggatatttatgactca
tcacgacaggcaacagcatttggtcttctaaaggctatcttatcaagaaaattgatggtc
ccagaaattgatgatgtcatgaagaaagtatcccaatttgccattactggacaaagcgaa
ccagtccgagtccagtgtagacaggtttatctgaagtacattcttgactacccaattggt
tctaaactgaaatccaacttggagttcatgttggctcagctgaactatgactatgaggca
ggaagagaatcggctttggaaatgatcgctcacctcttccaaaccttccctcagggattg
cttcatgagaactgtggtctgttctttgttcccctctgcctcatgatgatcaatgacaac
tccaccaagtgcaaaaagatggcctccatggccatcaagttactgctcagcaaggtcagc
ttggagaataaagacctgatgtacgtgcttgtggtcaagtggtttgggagtcagaagagt
ttgcagaagcgcttggctgcccagacctgtggcttgtttgtagagactgaaggggcagct
tttgagaggagatttggaacagtccttcccataattgagagagagcttgagccttcccag
ctccgagatctaatcgaagaaactgatgaaaaagcatctgaccgacttctctttggtttt
cttacgctgataactaaactaatcaaggaatctaactttcttcaactcaccaaacatcct
gagagtctgaacaatatctggagtcacatccagtcccatctctcacacccccacagctgg
gtgtggcttacttcagcccagatttttggattattatttgcctcttgcaaaccagaagaa
ctgattaagagatgggctgcccagaagtctaagaagaaacagtcaggcccagtagctgtt
accttcctgaccaaagaattagaccaaaagatgaaaagactggctttagctttttgctat
cagttgcagtcaaagtttttggatcagtctctgggagaacagattgttaagaatctgttg
tttgttgccaaagtcatctatcttctggcactccacaaagaggagaaggaagttccctct
gaggagagcatggagacccctgccccggaaacctcccagaccacggggcctgaggatgat
gcggggcatgcccgggaagcctctgatgatgaaaatgaggcagcagaagagaaggtggga
gcagaggaagaccaaggaagacccgccaacctgttctggctcatccacaagttgtccatc
atggcaaaacgggaagccgcatattcgcccaaaaatcccttaaagagaacctgcgtgttt
aagttcctcggggctctggccatcgatctgggccccgacaaggtccggcctttcctgcct
atgatcctcgccccgttgtttcgggaactgaacagcacctactcagagcaagacccttcg
ctgaaaaacctgtcccaggaaatcctggaactgctcaagaagatggtcggcttggaggcc
ttctcattggcttttgcctcagtgcagaagcgggccagggagaagagggcgctgcggatc
aagcggaaagccttgcagtttgtgactaatccggacattgctgccaagaagaagatgaag
aagcacaagaacaagagtgaggccaagaagaggaaaatcgagttcctgcggccaggctac
aaggccaagaggcagaggagccatggcctccgcgacctggccatggtggagtga
DBGET
integrated database retrieval system
