Monodelphis domestica (gray short-tailed opossum): 100014311
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Entry
100014311 CDS
T01031
Symbol
CHD9
Name
(RefSeq) chromodomain helicase DNA binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdo03036
]
100014311 (CHD9)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100014311 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
100014311
NCBI-ProteinID:
XP_016277410
LinkDB
All DBs
Position
1:443054430..443354491
Genome browser
AA seq
2897 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEDLSDDAFVQPGPVSLVDELNLGVEFEPLHIDSLNHVQDTQ
TPQKMTDFEQLNQFEPLKLHQVNQSFNSPVENVLSPHSQFSCSPVHPPNQSNGLFPDVAD
GSPMWGHQTSVSSQNGSPFHQQGHSQSMQQNKSFVAHPDFALFQVNEQQQQCTSLQSQQN
RNTNNPGQENLSQAKNFMEVNLSGPHRVHVTHPSQIPSASTSQQSLSIQQFSPPSNASVH
FCGNHQDGNFNGQSPNMTPCSVNNSQQFSSHYSFSSNHISPNSLLQSSTVLASSHSAHTL
SDFTGSNAFISQTGTKQESTQHILNSNSSLNSNNFEMLRSAHPQGNFNSSKLSPVHMNFP
DPVGSASHMGHFNDHVETNGFSSLEDNLLQVESQTEEFTGLDPDDLLQEGLLPQFDDSAF
EQDSSSHVLEHDLDPQLTPQLLTQPPDVARTQCQSQGHSWHLSVSNHQHSHDKEHLSLQR
QPPSSKKTDGSGMYAKLQNTQVRAMSEKKQKRKVESESKQEKANRIISEAIAKAKERGER
NIPRVMSPENFPSVSAEGKEEKKGRRMKSKPKDKESKKTKTCSSTKLKEKTKIGKLIITL
GKKQKRKNVSSDEMSDAEQISQRPFKDEDSQKRRSNRQVKRKKYAEDTEGKQSEEEAKVS
VKIKKSSASLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISPGMMIDAEEFFVKYK
NYSYLHCEWATEQQLLKDKRIQQKIXRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEV
SFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRHLDRPP
PNTWKKIEHSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYE
ILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSLVSRQMIQQYEMYFRDSQGR
IIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHK
VLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRR
LKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELR
KCCNHPYLIKGAEEKILGEFKESHNPAAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKV
LIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAG
GLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRAS
LKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQ
ILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDALSGRN
SLVIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRRPCDRSSGYGRTECFRVEKN
LLVYGWGRWREILAHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLITPTE
DGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIK
HHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGVEASDIDVWVPEPDHSEVPAEWWDLDADK
SLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAP
AMFKDDLEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQA
QQIQPAFSVQANVMQTPYEEAALNPKIAAKIERQQRWTRREEADFYRVVSTFGVVFDPDR
GQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPSIFIQPITEERA
SRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSR
TDYHILRDPELSFMAAQRNYSQNKMTHSRTSTPLIQQYQMALSASPLASQSRLLDAKGNT
LDDTKVKNESLKEEPQSSGEESVSSEEIRTGIKSEPLSPKNGVLPQTTGDPKSAGKVETD
RRMVAARTEPLTPNPASKKQRVSKRGSESSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHS
RSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSEDSDSEEEAQKREGTTHMKSYDEESVA
SLSTIQDETQDSFQMNNGTPNSAYILQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRGYEGNAVASFYTTKLLDSPGAAADTGEPCVLTPPSAGAREERDQSTQMSKVKKHVR
EKEFTVKINDEGGLKLTFQKQGLSQKRPLENEDGLLGQQQYLARLRELQNASETSLVNFP
KSMPVSGTSSQPAMGANGVILENQPIVKKRRGRRKNVEDVDILLLNRNKPPNHVTVGIAT
SQITPGINPALSYAQSQGILDVENPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVE
DLGAFIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLK
DLCRFLKENSEYGVAPEWGDVVKQSGFLPESMYDRILTGPVVREEVSRRGRRPKSEIAKA
TAAAAAATAANVSGNPLLGNGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPASLSGG
EVNKNMAAMFPMLLSGMTGLPNLLGMGGLLTKPAESVAEEKKANDSKEPDGRKERTESQN
SDNVGENSVSSSPSTSSSAALNTAAAANPLALNPLLLSNILYPGMLLTPGLNLHIPALSQ
SNIFDVQNNKNNDLDSAKPVEEKEEDSRVRDQEEKGETEPSSLNENSTDEGSEKADASSG
SESTSSSSEESDSSNED
NT seq
8694 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccaatgatggacttctttgacgatgccaatctttttggtgagaccttagaa
gatttgtcagatgatgcctttgtacaaccaggacctgtttcacttgttgatgaattgaac
ttgggtgtagaatttgaacctttgcacatagattcattgaaccatgtccaggatactcaa
acaccacagaagatgactgattttgagcagttaaatcagttcgagccactgaaacttcac
caagttaatcaatcattcaatagcccagttgaaaatgtgttatcaccacattctcagttt
agttgttccccagtccaccccccaaatcagtctaatggcttgtttccagatgttgctgat
ggcagtccaatgtggggtcatcagactagtgtttcaagtcaaaatgggtctccttttcac
caacaaggacattcgcaatctatgcagcaaaataaaagctttgtagcacaccctgacttt
gccttatttcaggtcaatgaacaacagcaacagtgcacatcactacagtcacaacaaaac
agaaatactaataacccagggcaagaaaatctaagccaagccaaaaactttatggaagtt
aatctttctggtccacatagagttcatgttacccacccatctcagattcccagtgcatca
acttcacaacagtctctctccatacaacagttttctccaccatcaaatgcttcagtgcac
ttctgtggcaatcaccaagatgggaattttaatggacagtctccaaatatgactccttgt
tctgtcaataattcacaacagttttcttcacattattccttctccagtaatcacatatct
ccaaacagtcttcttcagtcttctacagttcttgcatctagtcattcagctcatacttta
tctgattttactggaagcaatgcctttatatctcagacggggaccaagcaggaatctacc
cagcatattttaaactcaaattcatctttgaattcaaataattttgaaatgttgcgttca
gcacatcctcagggtaacttcaacagctcaaaattatctcctgttcacatgaatttccca
gatcctgttggttctgcttctcacatgggacatttcaatgatcatgtagaaacaaatggt
ttttcatctctagaagataatttacttcaagtagaatctcaaactgaggaattcacagga
cttgatccagatgatcttcttcaagagggtctccttccccaatttgatgactcagcattt
gagcaagatagttcaagtcatgttttagaacatgaccttgatccacaacttactccccaa
cttttaacacaacctccagatgtggctcgaactcagtgtcaaagtcagggacactcatgg
catttgtcagtttctaatcatcaacactcgcatgacaaagaacatttatctttgcaacgc
cagcctccttcctccaaaaagactgatggttctggtatgtatgcaaagttacagaatacc
caggtgagagccatgtctgagaagaagcagaaaagaaaggtggaatcagaaagcaagcaa
gaaaaggctaatcgtattatatcagaggcaatagcgaaagcaaaggaacgaggagaacga
aacattcctcgagtaatgagccctgaaaactttcccagtgtttcagctgaaggaaaagaa
gaaaagaaaggtagaagaatgaagtctaagccaaaagacaaggaaagcaagaaaacaaaa
acttgttcttcaaccaagttaaaagagaagacaaaaattgggaagctcattattactttg
ggtaagaagcaaaaaagaaagaatgtgtcttcagatgaaatgtctgatgctgagcagatt
tcacagcgtccattcaaagatgaagattctcaaaagagaagatcgaatcgccaagttaaa
aggaagaagtatgcggaagatacagaaggaaaacagtcggaagaagaagcaaaagtttct
gtgaaaatcaaaaaaagttcagcttctttacctgctgaacaacctttgcagttatttgtg
gagaatccaagtgaagaagatgctgcaattgtggacaaaatactgtcttcaaggattgta
aagaaggaaatatcacctggaatgatgattgatgcagaagaattttttgtgaaatacaag
aattactcctatcttcactgtgagtgggccacagaacaacaacttctaaaagataaaaga
atacagcaaaaaatctaaagattcaaattgagacaagcacaacgagcacatttttttgca
gatatggaagaagaaccttttaatcctgactatgttgaagtagatagagtgttagaagtt
tcattttgtgaagataaggacactggtgagcctgtaatttactacttagtaaaatggtgt
tcattgccatatgaagatagtacatgggaactgaaagaggatgtagatcaagcaaaaata
gaagaatttgaacaattgcaagcctcaaggcctgattctaggcacttggatcgtcctcct
cctaacacttggaaaaaaatagagcattccagagaatataaaaatggcaaccaactcagg
gaatatcaattagaaggactcaactggctcttgtttaattggtacaatagacgaaactgc
attttagctgatgaaatgggccttggcaaaacaattcaatcaataacatttctctacgaa
atacttctgaccggtatacgaggcccttttctgatcattgcaccactttcaactattaca
aactgggagagagaatttcgcacatggactgatcttaatgttgtggtatatcatgggagc
ctggttagcaggcagatgatacagcaatatgagatgtacttcagggactcacaggggcgt
attattagaggagcatacaggttccaggccataatcaccacttttgaaatgattctggga
ggctgtggagagctcaatgcaattgaatggcgatgtgtgattattgatgaagcgcatagg
ttaaagaataaaaattgcaaactcctagaaggtctgaaactcatgaatctggagcacaag
gtgcttttgactggtacaccacttcagaatacagttgaagaactattcagtcttcttcat
ttccttgaacccttacgatttccctctgaatctacattcatgcaagaatttggggatctt
aaaacagaagaacaggtacaaaaacttcaagccattttaaaaccaatgatgctgagaaga
ttaaaagaagatgtagaaaagaagttggctcctaaagaagaaaccataattgaagtagaa
cttactaatattcagaagaaatattatcgggctatcttggaaaagaattttgcattttta
tccaaaggagcaggacaagctaatgtacctaatttagttaacactatgatggaactcaga
aaatgctgtaaccacccttatcttatcaaaggtgctgaagagaagattcttggggaattt
aaagagtcacataatccagctgctcctgactttcatcttcaagcaatgatccagtctgct
ggcaaattggttctcattgataagcttcttccaaaaatgaaagcaggtgggcataaagtg
cttatcttctctcagatggtgcgctgccttgacattttggaagattatctcatacataag
aggtatttgtatgagcgaattgatggaagagttagaggaaatcttcgacaagctgccata
gatcggtttagtaagcctgattcagacagatttgtattccttttatgcacacgtgctggt
ggtctgggcattaatttaactgcagccgatacatgcatcatttttgattctgactggaat
cctcaaaatgacctccaggcccaagctcgatgtcacaggattggtcaaaacaaagcagtc
aaagtctacagattaataactcgtaactcttatgaaagagagatgttcgaccgggcaagc
ctaaaattgggtctagataaggctgtgttacagagcatgagtggaagagaaaatagtgtt
ggtggtattcagcaattgtccaaaaaggaaatagaagatctacttcgaaggggtgcatat
ggtgccattatggatgaagaagatgaaggttctaaattctgtgaagaggacattgatcaa
attttacagcgtcgtacaaaaacaatcacaattgaatctgaaggaagaggctcaacattt
gccaaggcaagttttgtggcttctgggaaccggactgatatttccttagatgatcccaac
ttttggcagaaatgggcaaagaaagcagaaattgatatagatgctctcagtggcagaaac
agcttagttattgacactccaaggatcagaaaacaaacaagaccttttagtgccacaaaa
gatgaattggctgaattgtctgaagttgaaagtgaaggagatgataagcccaaactccgt
agaccatgtgaccgttccagtggctatggaagaacagaatgctttcgagtggagaaaaac
ctgctcgtttatgggtggggtcgatggagagagattctagctcatggtcgatttaaaaga
caactaaacgaacatgatgtggaaatcatttgccgagcccttttagcatattgccttgtt
cactaccgaggagatgagaagattaagggtttcatatgggatctcattacccctacggaa
gatgggcaaacaagagaattgcaaaatcatctaggtctgtcagctcctgtccccaggggc
cgaaaagggaagaaagtgaaaactcaagcaagcacgtttgatatccataaagcagaatgg
cttcgaaaatataatcctgagcatctgctacaagatgaaggctataaaaaacacataaaa
catcattgtaataaggttttacttcgagtgaggatgctgtattatttaaaacaagaagtt
attggtaatgagttccagaaagtatttgatggagttgaagcaagtgacattgatgtttgg
gtccctgagccagaccattctgaagtccctgctgagtggtgggatcttgatgctgataaa
tctctccttattggtgtttttaaacatggttatgaaaagtacaacacaattagagcagac
ccagctctgtgtttcttggaacgagtaggaaaacctgatgaaaaagcagttgctgctgaa
cagagagcaaatgattacatggatggggatgtggaagacccagaatataaaccagctcca
gctatgtttaaagatgacttagaggatgatgtttcatcaccaggtgatcttgtaatagca
gatggagatggccaaatgatggaaggagacaagatttattggcctactcagtctgcttta
accacacgcttgcgccgcctcataactgcatatcagcggaccagtaaaaatagacaagcc
caacaaatccagccagcattctcagtacaggccaatgtgatgcagactccttatgaagaa
gctgctcttaaccctaaaatagctgccaaaattgagagacagcagagatggacgagaaga
gaggaagctgacttttatagagttgtgtctacttttggagtggtatttgatcctgacaga
ggacagtttgactggacaaaatttagagccatggctagactgcacaagaaaacagatgat
agtttggagaagtatttatatgcttttatgtccatgtgcaggagagtttgccgccttcct
tccaaagaagaattggtggacccaagtatttttatccaacccatcacagaggagcgtgct
tctaggactttgtatcgaattgagcttctaaggaaagtacgagaacaggctctccgacat
ccacaactgtttgaacgtttaaagctttgtcagccaaatccagatttgcccgtctggtgg
gagtgtggcactcatgacagagatttgcttattggagcagccaagcatggggttagcagg
acagactatcacattcttcgtgatcctgaactctcatttatggcagctcagaggaactat
agtcaaaataaaatgactcattcaagaacttctactccacttattcagcagtatcagatg
gcactgtctgcttcccctcttgcttctcaatcaaggttactggatgctaaagggaatacc
cttgatgatacaaaagttaaaaatgaaagccttaaagaagagcctcagtcttctggagag
gaatctgtgtcttccgaggaaattagaacaggaataaaatctgaacctttaagcccaaag
aatggtgttttgccacagactactggagacccaaagtctgctggaaaggttgaaacagat
aggcgcatggttgcagccaggacagaacccctaactccaaacccagcttccaagaaacag
agagtcagtaaaaggggatctgagtctagctctgattcggactcagattctgacagatct
tcttgttcttctagatcatcatcttcttcctcctcttcttcctcctcttgttcccactct
cgatctggatctagctcttcatcatcttcatcttgttcttcagcatcttcttcatcctct
tcttcttcttcttcttcctcctcttcttcttcctcatcagaagacagtgatagtgaagaa
gaagcacagaagcgagaaggcaccactcatatgaaatcatatgatgaggaaagtgttgca
tcactaagcactatacaagatgagactcaggatagttttcagatgaacaacggaacacca
aattctgcttacatcttacaaggtggatacatgctggctgcttcttattggccaaaggat
cgggtgatgattaatcggttagacagtatttgtcaaacagtcctgaaaggaaagtggcca
tcagcccggaggggttacgagggaaatgcagttgcatctttctacacaaccaagcttctg
gatagcccaggtgctgctgcagacactggcgagccctgcgtgctgactcctccaagtgca
ggggcaagagaagagcgtgaccagtccacacagatgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaagttgacctttcaaaag
caaggactttctcagaaaaggccacttgaaaatgaagatggtttactaggacagcagcag
tacctggcacggcttcgggaacttcaaaatgcttcagagaccagccttgtcaattttcca
aagtccatgccagtatcgggtacttctagtcagccagctatgggtgccaatggagtgata
ttagaaaaccagcccatagtcaaaaaaaggagaggaagaaggaagaatgtggaagatgtt
gacattctcctattaaatagaaataaaccacctaatcatgttactgtaggcattgccacc
tcacaaattactccaggaataaatccagcactgtcttatgcccaatctcaagggatactt
gatgtagaaaatccagttccagtaattaatctgaaagatggaacaagacttgcaggagat
gatgcacccaaaaggaaggatttagaaaaatggcttaaggagcatccaggttatgtggaa
gatttaggagcctttattcctcgaatgcagcttcatgatgggagacctaagcaaaaaaga
catcgctgcagaaaccccaacaaactagatgttaatagtctcactggagaagaacgtgtt
cagttgattaacagaagaaatgccagaaaggtaggaggtgcatttgctcctcctttgaaa
gatttatgtagattcctgaaagaaaattctgaatatggggtcgctcctgaatggggagat
gttgttaaacagtctggatttcttcctgaaagtatgtatgaccgtattcttactggtcct
gttgttcgagaagaagtaagcagacgggggagacggcctaaaagtgagattgccaaggca
acagcagcagcggcagctgcaacagcagcaaatgtgtctggcaatcctttgctaggcaat
ggattgctcccaggtgtggatctgaccactcttcaggccttacaacaaaacctacaaaac
cttcagtcactacaagtaactgcagggttgatggggatgcctgccagcctatctggtgga
gaagtaaataaaaacatggctgctatgtttccaatgcttttgtcagggatgacaggatta
ccaaatttactaggcatgggaggactcctgacaaaacctgcagaatctgtggcagaagaa
aaaaaggcaaacgactccaaggagccagatggaagaaaagaaaggacagaaagccaaaac
tctgacaatgtcggagaaaactctgtatcgagttctccttcaacttcctcttctgctgca
ttaaatactgctgcagctgccaatcccttagctcttaacccattactattgtccaatata
ctttatccagggatgcttctcactccaggccttaatcttcatatcccagctttgtcccag
tccaatatttttgatgtacagaacaacaaaaacaatgacctagactcagccaagcctgta
gaggaaaaggaggaagattccagggttagagatcaggaagaaaaaggggaaactgaacca
agttctctcaatgaaaacagcacagatgagggttcagaaaaagcagatgcttcatcggga
tctgagagtacatcatcatcatctgaggagtcagattctagtaatgaagactga
DBGET
integrated database retrieval system
