Monodelphis domestica (gray short-tailed opossum): 100014337
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Entry
100014337 CDS
T01031
Symbol
BARD1
Name
(RefSeq) BRCA1 associated RING domain 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100014337 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100014337 (BARD1)
04121 Ubiquitin system [BR:
mdo04121
]
100014337 (BARD1)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100014337 (BARD1)
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100014337 (BARD1)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100014337 (BARD1)
Ubiquitin system [BR:
mdo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100014337 (BARD1)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100014337 (BARD1)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100014337 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
RTT107_BRCT_5
ANK_LRRK2
Ank_KRIT1
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100014337
NCBI-ProteinID:
XP_007501849
Ensembl:
ENSMODG00000015631
UniProt:
F7FET6
LinkDB
All DBs
Position
7:178778611..178919495
Genome browser
AA seq
799 aa
AA seq
DB search
MQRDQPLKVRSGNEQWPESSMQPAGGGGVGAGAWNHSREALELLETQLRCSRCLNILREP
VCLGGCEHIFCSVCVGDCIGTECPVCHTPAWIQDVKINRQLDNMIQLCSRLRNLLHNTTG
TDEEESTPRTRASLDEDENNKKFIKMWFSPRSKKVRYVLNKTLVQTQPQPVENEQDYQAF
EFSSSSLEKDSPQRPKKVTRKTRKKQKKRSLVEINKKWDLEEEKQKEIHQPDESFNEKPK
EKSVSFCNQPSVLGTPENPPVLNGDLLDHGSVTEAVPTAVVTESSPLPVTQADSVEMDRD
SEVASSHPESFCEDNFTSETSLPLRNGGAWERQQPNSFVVPVSKRPRRRRSQQRVRRASL
SSDVPLESLTPREESAPSPTSKSLADEPFLRVRNSDVLNDSINFSPHKSSGTSSSSLLNS
PCQPWIVSSPSVVKMSPTSPMTVKRNHRGETLLHIASIKGDIPSVERLLQNGSDPNVKDH
AGWTPLHEACNHGHQKVVELLLEHKALVNTTGYQNDSPLHDAVRNGHVSIAKLLLSHGAS
RSAVNIFGLRPVDYAETEAMKSVLLLPEESEIYEIGQCSKSLNTSYRRDDPLVLLSSGLT
SDQQKLLSKLSAVLKAKKCTEFNSMVTHIIVPGDTAQRTMKCILGIISGCWILKFDWVKA
CLESRMCEPEEKYEILGGPQRSRLNREQLLPKLFDGCYFYFEGIFKHHSKDELVKLAKES
GGQILNRKPKPDSDVTQTINTVSYHARPDSDQRFCTQYIIYDAFSNYHPERVRQGKVWMA
PSNWFIDCLMAFQVLPVTK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgaccagcctctgaaggtccgctctgggaacgagcagtggcctgaatccagc
atgcagccagccggaggagggggcgtcggggccggagcctggaaccacagccgcgaggcg
ctggagctactggagacgcagctgcgctgctcgcgctgcctcaatatcctgagggaaccg
gtgtgcttaggaggatgtgaacatatcttctgcagtgtgtgcgtgggcgactgcatcggt
acggagtgtccagtgtgtcacacacctgcctggatacaggatgtgaagataaacagacag
ttagacaacatgatccagttatgcagcaggcttcgaaatctgttacacaacaccactggt
acagatgaggaagaaagcacccctaggacaagagcatcactggatgaagatgaaaacaac
aagaaattcataaaaatgtggtttagccctcgtagcaagaaagtcagatatgtcctaaat
aaaactttagtgcagacccagcctcagccagttgagaatgaacaggattatcaagccttt
gaatttagttcctcatctcttgaaaaagactctccccagaggcctaaaaaagttacccga
aaaactagaaaaaagcagaaaaaaagaagtttagttgaaattaataaaaaatgggatttg
gaagaagaaaagcaaaaagaaatccaccaacctgatgagagtttcaatgagaaacctaaa
gaaaagtcagtatcattctgtaaccaaccctctgttctgggaaccccagagaacccacca
gtactaaatggtgatctcttagatcatggctctgttacagaggccgttcctactgcagtg
gtgactgagagctccccattgccggtcacacaagcagattctgtagaaatggatagagat
agcgaggtagcatcctcccacccagaatctttttgtgaggataacttcacttcagagact
tccttgccattgaggaatgggggagcatgggagaggcagcagcccaactcctttgttgtg
cctgtttctaaaaggcctagaagaagaagaagccagcagagagtcagaagagcatctctg
agctcagatgtccccctggagtcattaacccctcgtgaagaaagtgccccatctcccacg
tccaaaagcctagctgatgagccattcctgagggtgaggaacagtgatgtactgaatgac
tcaatcaacttctccccccacaaatcttctggtacttcatcatcatccctgttgaatagc
ccttgtcagccgtggatagtgtccagcccttctgtggtgaagatgtctcccaccagccct
atgaccgtcaagagaaaccatagaggggagactctactccatattgcttctattaagggt
gacataccatctgttgaacgccttctccaaaatggaagtgacccaaatgttaaagaccat
gctggatggactccattgcatgaagcctgtaatcatggacatcagaaggttgtggaactg
ctcttggagcacaaggctttggtaaacaccactggctaccagaatgactcaccactccat
gatgcagtcaggaatgggcacgtgagcattgccaagctgttgctctctcatggagcctcc
cggagtgctgtaaacatatttggtctccggcctgtggattatgcagaaactgaagctatg
aaatcggtattgttgctgccagaagagagtgaaatatatgaaattggccaatgctcaaaa
tcattgaatactagttatcgaagagatgaccccctggttctcctcagcagcggcctcacc
tcagatcagcaaaagttactaagtaagctttcagcagttcttaaggctaagaagtgtact
gagtttaacagcatggtcactcatatcattgttcctggtgatacagcccaaagaaccatg
aaatgtattcttggtatcatcagtggatgctggattctaaaatttgattgggtaaaggcc
tgtctagaaagcagaatgtgtgaaccggaggaaaaatatgaaatacttggtggtccacag
agaagcaggctcaacagagaacagctgctgccaaagttgtttgatggctgttacttctat
tttgagggaattttcaaacatcattcaaaggatgagcttgtaaaactggccaaagaatct
ggagggcagatcctcaatcgaaagccaaaaccagacagtgatgtgacccagacgatcaat
acggtatcataccatgccagacctgactctgatcagcggttctgcacacagtatatcatc
tatgatgctttctctaattatcacccagagagggttcgtcagggcaaagtttggatggcc
ccttccaactggtttatagactgcttgatggcattccaggtgcttcctgttaccaagtga
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