Monodelphis domestica (gray short-tailed opossum): 100014459
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Entry
100014459 CDS
T01031
Symbol
NIPBL
Name
(RefSeq) NIPBL, cohesin loading factor
KO
K06672
cohesin loading factor subunit SCC2
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100014459 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdo03036
]
100014459 (NIPBL)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
100014459 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
100014459
NCBI-ProteinID:
XP_007487503
Ensembl:
ENSMODG00000020351
UniProt:
F7FKB7
LinkDB
All DBs
Position
3:complement(238968035..239235980)
Genome browser
AA seq
2911 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHTLNQVSTDHIELKDNLGSDDPEGDIPVLLQSVLARNPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRYMAQPNSPVPSPYAP
QSPAGYMPYSHPPSYTPHPQMQQASVSSPIVPSGLRNMHDNKVSGQLSGNSANHHADNPR
HGSSDDYLHMVHRLSSDDGDSSTMRNAASFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQSEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQEDMLSGIENSNVSESDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSVTAKQPQTSVVQSQQQAPQQGTLYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNNGSRPAL
MVSIDLHQAGRVESQASVTQDSDTIKKPEESKQCNDGAISVHQEDIGVLKQKLENHPETP
RKKSDTESVKTDMKQNENKLMESKPNENRLLETKLNESRPAAETKQNESRPAAEPKQIES
RSTVETKQTESKSMPEVKQTEGKSLVDVKHNESKPAAEAKSNENRATVVEAKQNENKSTE
AKQTESRPVTEVKQTESKVAAEAKQNENKATETKQNESRTTETKQNESKTESKQNENKTT
DAKPNENKQNNGKQETSKVRPETPKQKGEGRPETPKQKGEGRPETPKQKGEGRPETPKQK
GDGRPETPKQKGDGRPETPRHRHDRRDSGKSSTEKKPETRHKQDVKSDSPRVKSERSETS
KQRPDGRSVSESLRRDHDNKQKSEDKTESERHRGDQSRIRRPDTLRSSNRNEHDSKHGIK
SDGSKTDKLERKHRHESGESRERLSSGEQKSRPDSPRIKESRGDTSKTRSDKSGFKSPNS
KDDRRTDGNKSKVDSNKTHPDNKADFPSYLLGGRSGALKNFVIPKIKRDKDGNVTQETRK
MELKGDQKDKIEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDREDRSRSSLKTSKNKP
SKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDND
SEDAFESSRKRHKKDKDDDKAWEYEERDRRSSGDHRRSGHSHEGRRSSGGGRYRNRSPSD
SDMEDYSPPPSLSEVARKMKKREKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENL
EDMDFTAFGDDEEIPQELLLGKHQLSELGSESAKIKAMGIMDKLATDKTVKVLNILEKNI
QDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVI
ERVIQYTKFHLQNTLYPQYDPVYRVDPHGGGVLTSKAKRAKCSTHKQRVIVMLYNKVCDI
VSSLAELLEIQLLTDTTILQISSMGITPFFVENVSELQLCAIKLVTAVFSRDEKHRQVIL
EEIFTSLARLPTSKRSLRNFRLNSSDMDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNS
EEESNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFVQDLLSTV
NKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGS
IARILKQVTGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFRDTTLETEKAMK
SQKDEDSSEGTHHAKEVETTGQIMHRAESRKKFLRSIIKTTPSQFSTLKMNSDTVDYEDA
CLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQ
RGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILR
DICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNI
TDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLADSD
NKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILEL
VVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRY
YGALSKLKSQHQEDPNSTILTANKPALLRSLFTVGALCRHFDFDQEDFKGSSKVNIKDKV
LELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNSILADKNSSVNLKIQV
LKNLQTYLQEEDTRMQQADKDWKKVAKQEDLKEMGDVSSGMSSSIMQLYLKQVLEAFFHT
QSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQLVEIDKKYAGFI
HMKAVAGMKMSYQVQQAINTSPKDAVRGFRQDESSSALCSHLYSMIRGNRQHRRAFLIAL
LNLFDDTAKTEVNMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMV
KDKRKEKKPSPNRESASGSDSEGEVSKPRKSRKRVDSDSDSDDEDDINAVMKCLPDNSSP
LIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGIHFHPKQ
TLDFLRSDMANSKITEDVKRSIVKQYLDFKLLMEHLDPDEEEEEGEVSASTNARNKAITS
LLGGGSPKNNAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAI
CCPKYKDRPQIARVVQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIY
KKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8736 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcggggattgctagtctcaca
gacctcttgaatcagttgcctcttccatctcctttacctgctacaactacaaagagcctt
ttgtttaatggacgaatagcagaagaggtaaactgccttttggcctgtagggatgaaaat
ttggtttcacagcttgttcacaccctcaaccaggtgtcaacagatcatatagagttgaaa
gataatcttggtagtgatgatccagaaggagacataccggtcttactgcagtctgtcctg
gcaaggaatcctaatgttttcagggagaaaagcatgcagaacagatacgtacaaagtgga
atgatgatgtcccagtataaactttctcaaaattccatgcacagtagtcctgcatcttcc
aattatcaacaaaccactatctcacatagcccttccagccgatttgtgcccccacagaca
agctctgggaacagatatatggcacaaccaaacagcccagtgcctagtccatatgcccca
cagagccctgcaggatacatgccatactcacatcctccaagttacacaccacatccacag
atgcagcaagcatcagtatcaagtcccattgtcccaagtgggctgagaaacatgcatgat
aataaagtttctggtcagttgtctggcaattcagctaatcatcatgctgataatcctaga
catggctcaagtgacgactacctacacatggtgcacaggctaagtagtgatgacggggat
tcttcaacaatgaggaatgcggcatcttttcctttgagatctccacagccagtgtgctcc
ccagctggaagtgatggaactcctaaaggatcaagaccaccattaatcttacagtctcag
cctccaccctattcatcacctagagatgttcctcctgacatattattagattcaccagaa
agaaaacagaagaaacaaaagaaaatgaagttagggaaagatgaaaaagatcagagtgaa
aaagctgcaatgtatgatatcattagttctccatccaaggactctactaaacttacatta
agactttctcgtgtaagatcttcagatatggaccagcaggaagatatgctttctggaata
gaaaatagtaatgtgtcagagagtgatattccttttaatgtccagtacccaggacaaact
tcaaaaacacccattacgccgcaggatgtaaaccgcccactaaatgctgctcagtgtttg
ccgcagcatgaacagacagcattccttcaggcacaacaagtgcctgttttacaacagaac
acttcagttactgcaaaacaacctcagacttctgtggtacagtctcagcaacaggcacca
caacaaggaacgctatatgatgaagtagaattggatgcattggctgaaatcgagaggata
gaacgggaatcagctattgaaagggaacgtttttcaaaagaagttcaagataaagataag
cctttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctactggaggt
aatagaccagcttctcaggagacaggttctacaggaaataatgggtcaaggccagcttta
atggttagcattgatcttcatcaggcaggacgagtagagtctcaggcatctgtaactcag
gattcagacaccattaaaaagcctgaagaaagcaaacagtgtaacgatggggctatttct
gttcatcaagaagatattggagttcttaaacaaaaacttgaaaaccatcctgagacccct
aggaaaaagtctgatactgagagtgtaaagactgacatgaaacaaaatgagaacaaattg
atggaatctaaaccaaatgaaaacagattgttggagacaaaactgaatgagagcagacca
gcagcagaaactaaacagaatgagagcagaccagcagcagaacctaaacagattgagagc
agatcaacagtagaaactaagcaaactgagagcaaatcaatgccagaagttaaacagact
gagggcaaatcattggtggacgttaagcataatgagagtaaaccagcagcagaagctaag
tccaatgagaacagagccacagtagtggaagcaaaacagaatgaaaataaatcaacagaa
gcaaaacagactgaaagtagaccagtgacagaagttaaacagactgagagcaaagtagca
gcagaagctaaacaaaatgagaataaagcaactgaaaccaagcagaatgaaagcagaacg
acagaaactaaacaaaatgagagcaaaactgaatcaaaacaaaatgagaacaaaacaaca
gacgcaaaaccaaatgaaaataaacaaaataatggtaagcaggaaacatccaaggtgaga
cctgaaactcccaagcagaagggtgagggcagacctgaaactcccaagcagaagggagag
ggcagacctgaaactcccaagcagaagggtgagggccgccctgaaactcctaaacagaag
ggtgatggccgccctgaaactcccaaacagaagggtgatggccgccctgaaactccaaga
caccggcatgataggagagattctggaaagtcatctacagaaaagaaacctgaaacaaga
cataaacaggatgttaaatctgattctcctcgagtgaaatctgaaagatctgaaacttca
aagcaaagaccagatggacgatctgtttctgagtcattaaggcgcgaccatgataataaa
cagaaatcagaggataagactgaatcagagagacatcgaggagatcagtccagaattcga
agaccagatacattaagatcctccaatagaaatgagcatgattctaaacatggcattaaa
tctgatggttcaaaaacagataaactagaaagaaaacacagacatgaatcaggggagtcc
agggaaagactgtcttctggggaacagaaatcaagacctgatagtcctcgtattaaagag
agtagaggcgatactagcaaaacaagatctgataaatctggttttaaatcaccaaatagt
aaagatgatcggaggacagatggtaataaaagcaaagtagacagtaataaaacacaccct
gacaataaagcagattttcccagttatttgttggggggcagatctggtgcattgaaaaat
tttgtcattccgaaaatcaagagagataaagatggcaatgttactcaggaaacaaggaaa
atggaacttaagggggatcagaaagataaaattgaaaaaatgggactagttgaagatcta
aataaaggagctaagcctgtagttgtcctgcagaagctatctttggatgatgttcagaaa
ttaattaaggatagagaggacagatcaagaagttctcttaaaactagcaagaataagcca
tccaaatcaaataaaggtagtatagatcagtcagtgttaaaagaattaccccctgaactc
ctggcagaaattgaatctaccatgccactttgtgaacgtgtgaaaatgaacaagcgcaaa
cgtagcacagttaatgaaaagccaaaatatgctgaaatcagttcggatgaagacaatgac
agtgaagatgcttttgaatcttctcggaaacgacataagaaggacaaagatgatgataaa
gcttgggaatatgaagagcgtgacagacgaagctctggggatcataggagaagtggccat
tctcatgaaggcaggaggagttccggtggtggccgttatcgaaaccgcagcccatcggat
tcagacatggaagattattctcctcctcccagcctcagtgaggttgctcgaaagatgaag
aaaagagaaaagcaaaagaaacggaaagcttatgaaccaaaactaacaccggaagaaatg
atggattcttctacttttaagaggtttactgcttcaatagagaatattttagaaaatctc
gaagacatggattttacagcatttggtgatgatgaagaaattcctcaggaactgctatta
ggaaaacatcagcttagtgaattgggcagtgaatctgctaaaattaaagcaatgggaata
atggataagctcgcaactgataaaacagtaaaagttctaaatattttggagaaaaatatt
caggatggatctaagctttctacattgttaaatcataataatgacactgaagaagaggaa
cgtctgtggagagacctaattatggagagagttacaaaatcagcagatgcttgtcttaca
gctattaacattatgacatcacctaacatgccaaaagctgtatatattgaggatgtaata
gaaagagttatacaatacactaaatttcatttacaaaatactctttatcctcagtatgat
cctgtctacagagtggatcctcatgggggaggagtattgacctcaaaggcaaaacgtgcc
aagtgttccactcataagcagagggtaatcgtaatgctttataacaaagtttgtgatatc
gttagcagcttagcagaacttttggaaatacagctcctaactgatacaacaattcttcag
atatcatcaatgggaataacaccattttttgtagaaaatgtcagtgaactccagttatgt
gccatcaaattagtaactgcagtattctcaagggatgaaaaacataggcaggtgattttg
gaagaaattttcacttcacttgcaagattgccaaccagcaagaggagtctaaggaacttc
aggttgaatagtagtgatatggatggggagcctatgtatattcagatggtgactgcacta
gttttgcaacttattcaatgtgtagtacatctaccatcagcagagaaagattctaattca
gaagaggaatcaaacaaaaaagtggatcaggatgtcgtcattactaattcttatgagaca
gctatgagaactgctcagaatttcctctctattttcctaaaaaaatgtgggagtaagcaa
ggagaagaagattacagaccactctttgaaaattttgttcaagatctactttccacagtc
aataagccagaatggccagctgctgaattattacttagcttgttagggagactcttggtt
catcagttcagcaataagtcaacagagatggctttaagagtggcatctcttgattatctt
ggaacagtagctgcacgattgaggaaagatgctgttacaagcaaaatggatcaaggatct
atcgcccgaattttaaaacaggttacaggaggggaagatgaaattcaacagttgcaaaag
gcattgctagattacctggatgaaaacactgaaactgatccttcattggtgttttctcgt
aagttctatatagctcagtggtttcgagacacaactttggaaacagaaaaagctatgaaa
tcacagaaagatgaggattcatcagaagggacacaccatgcaaaggaggttgaaacaact
ggtcaaatcatgcatcgagcagaaagtcggaaaaaatttcttcgaagcattattaaaact
acaccttcacagttcagtacattaaagatgaattctgatactgtggactatgaagatgct
tgcttgattgtaagatacttggcctctatgaggccgtttgcccagagcttcgatatttat
ttgacacagattctgcgagtacttggtgaaaatgcaatagctgttcgaacaaaagccatg
aagtgtttatcagaggttgttgctgtagatcccagcattttagcaaggttggatatgcaa
cgaggtgtccatggaaggttaatggataattccactagtgtccgtgaggcagcagttgaa
ttgttaggtcgatttgtcctctgtcgacctcagcttgctgaacagtattacgacatgctg
attgaacgaatattggatactggtatcagtgtcaggaaaagggtaataaagattctgaga
gatatatgtattgaacaacctacatttcccaaaatcacagagatgtgcgtgaaaatgatc
cgcagagtaaatgatgaagagggcattaagaaattagtaaatgaaacattccagaaactc
tggtttactccaactcctcatcatgacaaggaagcaatgaccagaaaaattttaaacatc
actgatgtggttgcagcttgtagagatactggatatgactggtttgaacagcttcttcaa
aatcttttaaaatcagaagaagatgcttcttataaacctgtgaagaaagcttgtactcag
cttgttgataacttagttgagcatatccttaaatatgaggaatctctagctgattctgac
aataagggagtgaattctggtcgattggtagcttgcataaccactttgttcttattcagc
aaaatcagaccccagctaatggtcaaacatgccatgaccatgcaaccataccttaccact
aaatgtagcacacaaaatgatttcatggtcatttgcaatgttgcaaaaattttagaatta
gtagtaccattgatggagcacccaagtgaaaccttccttgccaccattgaggaagatcta
atgaaacttatcatcaaatatggcatgacagtagtgcaacattgtgtgagctgtcttggg
gctgttgtaaataaagtcacacaaaattataaatttgtgtgggcttgtttcaatagatac
tatggtgcactttcaaaattaaaaagtcagcaccaagaagacccaaacagtacaatactt
acagcaaataaaccagcactgcttagatctcttttcactgtcggagcactatgtcggcat
tttgattttgatcaagaagactttaaaggcagcagtaaggttaacataaaggataaagta
cttgaactcctgatgtattttacaaaacattcagatgaggaagtacaaaccaaagccatt
attggtctaggatttgcatttattcagcatccaagtctaatgtttgagcaagaggtaaag
aatttatataacagcattctagctgataaaaacagctcagtaaatttaaaaatccaagtg
ttaaaaaatctccagacctacctacaagaagaagatacacgtatgcaacaggcagataaa
gactggaagaaagtagcaaaacaggaagatctgaaagaaatgggtgatgtgtcctcaggg
atgagtagctccattatgcagctttacctcaaacaagttcttgaggctttctttcacact
cagtcaagtgtgcgccactttgccctaaatgtcattgcattgactctcaaccaggggctc
attcatcctgttcagtgtgtgccatatttaattgctatgggcacagaccctgaacctgct
atgcggaataaagccgaccagcagcttgtggaaatagacaaaaaatatgctggattcatt
cacatgaaagctgtggctggtatgaagatgtcttaccaagttcagcaagccatcaacaca
tccccaaaagatgccgtgaggggcttcagacaagatgaatcctccagtgctttatgttca
catctttactccatgatccgtggaaatcgccaacacagacgagcctttctaattgcttta
ctcaatctctttgatgacacagcaaaaacagaagtgaatatgctcttgtatatagcagac
aatctagcctgtttcccttaccaaacacaggaagaaccattgtttataatgcatcatata
gatattacactctcagtttctggcagtaaccttctgcagtcatttaaggagtctatggtg
aaggacaagcggaaagagaagaaaccctcaccaaatcgggaaagtgcatctggaagtgat
agtgaaggagaggtttccaagcctcgaaagtcacgtaaacgagttgactctgattcagat
tcagatgatgaagatgacataaatgctgtgatgaaatgtttaccagataattcaagtcct
ttaattgagtttgcaaatgtgtcccagggtattttattacttctgatgttaaaacaacat
ttaaagaacctatgtggattctctgatagtaaaatccagaagtattctccatctgaatct
gcaaaagtatatgataaagcgataaaccggaaaacaggaatccattttcatcctaaacaa
accttagacttcctgcggagtgatatggctaattccaaaattacagaagatgtgaaaagg
agtatagttaaacaatatctagatttcaagctcctcatggaacatctggatcctgatgaa
gaagaagaagaaggggaggtgtcagctagcacaaatgctcggaacaaagcaattacctca
ctgcttggaggaggcagccctaaaaataatgcagctgagacagaagatgatgaaagtgat
ggggaggatagaggaggaggcacttcagggtcattgagaaggtcaaaacgaaattcagac
tctacagagttggcagcacagatgaatgaaagtgttgatgtcatggatgtcatcgctatt
tgctgtccaaagtacaaagatcgaccacaaattgcaagagtagtacagaaaaccagcaat
ggcttcagtgttcagtggatggcaggctcctacagtggctcctggactgaggctaagcgc
cgtgatggtcgcaaactggtgccttgggtagacactattaaagagtcagacattatttac
aaaaaaattgctctaacgagtgctaataagctgactaataaagttgttcagactttacga
tcgctgtatgccgccaaggatgggacttccagctaa
DBGET
integrated database retrieval system
