Monodelphis domestica (gray short-tailed opossum): 100014523
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Entry
100014523 CDS
T01031
Symbol
SOX2
Name
(RefSeq) SRY-box 2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04390
Hippo signaling pathway
mdo04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
100014523 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100014523 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100014523 (SOX2)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100014523 (SOX2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100014523
NCBI-ProteinID:
XP_001368820
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All DBs
Position
7:204853872..204856186
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AA seq
348 aa
AA seq
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MYNMLETDLKPPGPQQTSGGGGGGGGGGGGGGPNSTSAGGTNQKNSPDRVKRPMNAFMVW
SRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYR
PRRKTKTLLKKDKYTLPGGLLAPGGNSMGGGVGVGAGGLGGGVNQRMDSYAHMNGWSNGG
YSMMQEQLGYSQHPGLNAHNAAAAAAAAAAAAQMQPMHRYDVSALQYNSMTSSQTYMNGS
PTYSSMAYSQQAAPGGGAGGGGGGAMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGD
LRDMISMYLPSAEVPEPAAPSRLHMSQHYQGAPVPSTAINGTLPLSHM
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgctggagaccgacctcaagcctcccggcccgcagcaaacttcggggggc
ggcggcggcggcggtggcggtggtggcggcggcggccccaactccacttcggcgggcggc
acgaaccagaagaacagcccggaccgcgtgaagcggcccatgaacgccttcatggtgtgg
tcccgcgggcagaggcgcaagatggcccaggagaaccccaagatgcacaactcggagatc
agcaagcgactgggcgccgagtggaagctgctgtccgaggccgagaagcgtcccttcatc
gacgaggccaagcggctgcgcgccctgcacatgaaagagcacccggactataagtaccgg
ccgcgccggaaaaccaagacgctgctgaagaaggacaaatacacgctgcccggcggcctg
ctggcacccggcggcaacagcatgggcggcggcgtcggcgtcggggcaggcggcctgggc
ggtggcgtcaaccagcgcatggacagctacgctcacatgaacggctggagcaacggcggc
tacagcatgatgcaggagcagttgggttactcgcagcacccgggcctcaacgcgcacaat
gcggccgcagccgcggccgcggcggcggcggccgcccaaatgcagcccatgcaccgctac
gacgtgagcgccctgcagtacaactccatgacgagctcgcagacttacatgaacggctcg
cccacctacagcagcatggcgtactcgcagcaggccgcccccggcggcggcgctggcgga
ggcggcggtggcgccatggctctgggttccatgggctccgtggtcaagtcggaggctagc
tccagcccccctgtggtcacctcttcgtcgcactccagggcgccctgccaggccggggac
ctgcgggacatgatcagcatgtacctgcccagtgccgaggtgcccgagcccgcggcgccc
agcagactgcacatgtcccagcactaccagggcgcgccggtgccgagcacggccatcaac
ggcacgctgcccctgtcgcacatgtga
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