Monodelphis domestica (gray short-tailed opossum): 100014550
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Entry
100014550 CDS
T01031
Symbol
COLGALT1
Name
(RefSeq) collagen beta(1-O)galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo00310
Lysine degradation
mdo00514
Other types of O-glycan biosynthesis
mdo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100014550 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100014550 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mdo01003
]
100014550 (COLGALT1)
Enzymes [BR:
mdo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
100014550 (COLGALT1)
Glycosyltransferases [BR:
mdo01003
]
O-Glycan biosynthesis
O-linked Gal type
100014550 (COLGALT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
100014550
NCBI-ProteinID:
XP_001368839
Ensembl:
ENSMODG00000004372
UniProt:
F6W8D5
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Position
3:431868268..431900853
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AA seq
623 aa
AA seq
DB search
MGTAWGRSSSPGIPRLLGLALCAAAALLLRGPGRAAAYFPEERWSPESSLQAPRVLIALI
ARNAAHALPSTLGALERLRHPRDRTALWVATDHNVDNTSAVLREWLVGVKSLYHYVEWRP
MEEPRSYPDEEGPKHWSNSRYEHVMKLRQAALKSARDMWADYILFLDADNLLINPDTLSL
LIAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRRRDRRGCFAVPMVHSTFL
IDLRKEASRELAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMFVCNKEVYGFLPVPLRAHS
SLRDEAESFMHAQLEVMVKYPPVDPSHFTSVQAKVPDKMGFDEVFMINLKRRLDRRERML
RTLHEQEIECKIVDAIDGRAMNTSQVEALGIRMLPGYQDPYHGRPLTKGELGCFLSHHQI
WKEVVERGLEKSLVFEDDLRFEIFFKRRLMNLMYDIEEEGLEWDLIYVGRKRMQVEHPEK
AVPHVRNLVEADYSYWTLAYVLSLQGAQKLLAAQPLSKMLPVDEFLPVMFDKHPVSDYKE
HFEKRDLLAFSVEPLLVYPTHYTGDDGYISDTETSVVWNNEKVKTDWDRAKSQKMKEQQE
LSKEAKNSDVLQSPLDSTARDEL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgggcacagcctggggccgcagttctagccccgggatcccgcgcctgctgggcctggcg
ctgtgcgcggccgcagcgctgctcctgcggggcccgggccgcgcagccgcctacttcccg
gaggagcgttggagccccgagtcttcattgcaggcgccgcgggtcctcatcgcgctcatc
gcccggaatgcggcccacgcgctgccctctactctgggcgctctggagaggctgcggcac
ccgcgggaccggaccgctctgtgggtggctacggaccataatgtggacaacacttcggct
gtgctgcgggagtggctggtgggcgtaaagagcctgtaccactacgtggagtggcggccc
atggaagagcccaggtcctaccctgatgaggagggccccaaacactggtccaactctcgc
tatgagcatgtgatgaagctcagacaggcagccctgaaatcagcccgggatatgtgggca
gactacatcctgtttctggatgcagataatctcctgataaacccagacactctgtccctg
ctgatcgcagagaacaagacagtcgtggctcccatgctggactccagagctgcctattcc
aatttctggtgtgggatgacttctcagggctattacaaacgaacccctgcgtacataccc
atcaggaggcgggatcgccggggctgctttgctgttcccatggtacattccacctttctg
atagacctacggaaagaggcctctcgggagctcgccttctatcccccacaccctgattat
acctggtccttcgatgacatcattgtctttgctttctcctgtaagcaagcagaggtacag
atgtttgtctgcaacaaggaggtctatggcttcctcccagtgccgctgagggcccacagc
agccttcgagatgaggctgagagcttcatgcatgcccagctcgaggtcatggtaaagtac
cccccagtggacccatcacattttacctctgtccaggccaaggtacctgataagatgggc
tttgatgaggtcttcatgattaatctcaagcggcgactggacagacgtgagcgtatgcta
aggactctccatgagcaggagattgaatgcaaaattgtggatgcaatagatggaagagcc
atgaacacgagccaagtggaagccctggggattcggatgctgccaggttatcaggacccc
taccacggccgcccactcaccaagggagaactgggctgcttcctcagtcaccatcagatc
tggaaggaggttgtggagcgaggcctggagaaatctcttgtgtttgaggacgacctccgc
tttgagattttcttcaaaaggcgcctgatgaatctgatgtatgacatcgaggaagaaggt
ctggagtgggacttgatctatgtgggcaggaagcggatgcaagtggagcaccctgagaag
gcggtaccgcatgttcggaacttggtagaggctgactattcctactggaccctggcctat
gtcctctccctccagggagcgcagaagctgctggctgcccagcctctctccaagatgctg
cctgtggacgagttcctgccggtgatgtttgacaaacaccccgtctctgactacaaagaa
cactttgagaagcgagacctgctggccttctcagtggagcccctcctcgtgtatcccacc
cattacacgggagacgacggctacatcagtgacacggagacctctgtggtgtggaataat
gaaaaggtgaagacagactgggatcgagcgaagtcccagaagatgaaggagcagcaggaa
ctgagcaaggaggccaagaactcagatgttttacagtcccctcttgacagcacagcccga
gatgagctgtga
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