KEGG   Monodelphis domestica (gray short-tailed opossum): 100014572
Entry
100014572         CDS       T01031                                 
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor beta receptor associated protein 1
  KO
K20177  vacuolar protein sorting-associated protein 3
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    100014572 (TGFBRAP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdo04131]
    100014572 (TGFBRAP1)
Membrane trafficking [BR:mdo04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    100014572 (TGFBRAP1)
SSDB
Motif
Pfam: Vps39_1 CNH zf-Vps39_C Clathrin TPR_Vps41
Other DBs
NCBI-GeneID: 100014572
NCBI-ProteinID: XP_001364055
Ensembl: ENSMODG00000002497
UniProt: F7B9S5
LinkDB
Position
7:complement(69617238..69683704)
AA seq 860 aa
MMNIKAFRLVSAIERELLMGDKDHINIECIECCGKNLYVGTNDCFIYHFLLEEKMSPTGK
VAFSATKQRHKYLAFKKPVNELKAASALNRLLVLCDNTIALVNMMNLEPIPSGARIKGAV
TFALNENPVSVDPFCVEVCIISVKRRTIQMYLVYEDRVQIVKEVSTSEQPFAVAVDGHFL
CLALTTQYIILNYNTGASQDLFPYCSEERQPIVKRIGRKEFLLAGPGGLGMFATVDGISQ
RAPVHWSENVIGAAICFPYVIALDDEFITVHSMLDQQRKQTLPFKEGHILQDFEGRVIVA
TSKGVYILVPLPLERQIQDLLASQRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ
FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTTSSFTRSHPPLHEYADLNQLTQGDQEK
MTKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHESLLDLLVTENFCLLTDSV
AWLEKHKKYFALGLLYHYNGQDAAAVQLWVNIVNGEIHDSTRSDLYEYIVDFLTYCLDQE
LVWKYAEWVLQKSEEVGVQIFTKRPLEEQQKNNFNPDDIINCLKKYPKSIIKYLEHLVVD
RKVQKEEYHTHLAILYLEKVLQQKPSANGNCAEVTETQAKLRSLLQKSDLYRVHCLIDKI
QGTSLHMESAILHGKLEEHDKALHILVHELKDFSAARDYCLWSSQGRDAPYRRRLFHMLL
SIYLEPGPSACDLALAAVDLLNLHAAEFDAARVLELVPDGWSVQLLAPFLTRALRESLHT
RRMTQAALGLASSENLLYKHDKIKLKGSPVRLSDKKLCQMCESPFCEPAFVRYPNGGVVH
THCAASRHTNPSSSSPGSRT
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgatgaacatcaaggctttcagactggtctccgccatcgagcgggagctcctgatgggt
gacaaagatcacatcaatattgaatgcattgagtgctgtggaaagaacctttatgttggt
accaatgattgtttcatttaccacttcctattagaggaaaagatgtcaccaactggaaag
gtcgctttctctgcgacaaagcagagacacaaatatctggctttcaagaaaccagtgaat
gaattgaaagcagcatcagctctcaataggctcttggtgctttgtgacaataccattgca
ttggttaacatgatgaacctcgaacctatcccttcaggtgctcgaataaaaggggcagtg
acttttgctttaaatgagaatcctgtgagtgtggaccccttttgtgtggaggtttgcatc
atttcagtcaaacgtaggaccattcagatgtatttggtctatgaagaccgagtccaaata
gtaaaagaagtgtcaacctcagagcaaccgtttgctgtggctgtggatggccacttttta
tgcctggcacttactactcagtacatcatattgaattataacacaggagcctcccaggat
ttgttcccatattgcagtgaagaaagacagccaattgtgaagaggatagggagaaaagaa
tttctgctggctgggcctggaggactgggcatgtttgcaacagttgatggaatatcccag
cgtgcccctgtgcattggtcagagaatgtgattggtgcagccatttgctttccatatgta
atagctctagatgatgaattcattacagtgcatagcatgctggatcaacagcgaaaacag
acactgccttttaaggaaggccacattttacaggactttgaaggtagagtgattgtagcc
accagtaaaggagtatatatcttggttccattaccccttgaaagacaaattcaggatctc
cttgcaagtcaaagagtggaagaagctttagttttagcaaaaggagcacgaaggaacatt
ccaaaagaaaaatttcaggtaatgtacagaagaatcctgcagcaggcaggttttatacag
tttgcacagcttcagttcctagaagctaaagaactcttcagaagcggccagcttgatgtc
cgggagctgatatctctgtatcccttcctgttgcctactacttcttcattcacacggtct
cacccccctctgcacgagtatgcagacctgaatcagctgacccaaggggaccaggagaag
atgaccaagtgcaaaagattccttatgagctacttaaatgaggtccgtagcacagaagtg
gcaaatggttataaagaagatattgatactgcgttgctcaaattgtatgcagaagcagat
catgaaagcttgctggaccttctagtcacagagaacttctgccttttaacagacagtgtg
gcgtggctcgagaaacacaaaaagtattttgcacttggactcctttatcattataatggt
caagatgcagccgcagtgcagttatgggtgaacattgtgaatggagaaattcatgactct
actcggtcagacctttatgaatatattgttgatttcctaacctactgcttagaccaagaa
ctagtatggaaatatgctgagtgggtattgcagaaaagtgaagaggttggagttcagatt
tttaccaagagacctttggaagagcagcaaaaaaataactttaacccagatgatatcatt
aactgccttaaaaaatatcctaagtctattattaagtacctggaacatctagtcgtggac
cggaaggtgcaaaaggaagagtatcacacccacttagccatcctctatctagagaaagtg
cttcagcagaagcccagtgcaaatggtaactgtgctgaagtgactgaaactcaggcaaag
ctacggagtctccttcaaaaatcggatctctacagagtccactgtctgatagataaaatc
caggggactagcctccatatggagagcgccatattgcacgggaagctggaggagcacgac
aaggccctgcacatcctggtgcatgagctgaaggacttctccgcagcccgggactactgc
ctgtggagctcacaggggagggatgctccgtaccgccggcgcctctttcacatgctgctc
tccatctacctagagccaggcccttctgcctgtgacctggcgctggccgctgtggacctc
ctgaacctccacgcggccgagtttgacgcggctcgggtactggagctggtgccagacggc
tggtccgttcagctgctggcccccttcctcaccagggcgctgagggaaagcctccacacc
aggaggatgacgcaggccgcactaggcttggccagctccgagaacttactctacaagcat
gacaagataaaattaaaaggaagcccagtgcggctatcggacaagaagctttgccagatg
tgcgagagtcccttttgtgagcctgcgttcgtcaggtatccgaatggcggtgtggtccac
actcattgtgctgcaagcagacacacgaaccctagctcatctagccccggcagtcggact
tga

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