Monodelphis domestica (gray short-tailed opossum): 100014846
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Entry
100014846 CDS
T01031
Symbol
PSMD1
Name
(RefSeq) proteasome 26S subunit, non-ATPase 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03050
Proteasome
mdo05010
Alzheimer disease
mdo05012
Parkinson disease
mdo05014
Amyotrophic lateral sclerosis
mdo05016
Huntington disease
mdo05017
Spinocerebellar ataxia
mdo05020
Prion disease
mdo05022
Pathways of neurodegeneration - multiple diseases
mdo05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100014846 (PSMD1)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100014846 (PSMD1)
09164 Neurodegenerative disease
05010 Alzheimer disease
100014846 (PSMD1)
05012 Parkinson disease
100014846 (PSMD1)
05014 Amyotrophic lateral sclerosis
100014846 (PSMD1)
05016 Huntington disease
100014846 (PSMD1)
05017 Spinocerebellar ataxia
100014846 (PSMD1)
05020 Prion disease
100014846 (PSMD1)
05022 Pathways of neurodegeneration - multiple diseases
100014846 (PSMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mdo03051
]
100014846 (PSMD1)
Proteasome [BR:
mdo03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
100014846 (PSMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
PC_rep
RPN2_C
HEAT_2
HEAT
HEAT_EZ
PA26
Motif
Other DBs
NCBI-GeneID:
100014846
NCBI-ProteinID:
XP_016284815
Ensembl:
ENSMODG00000010703
LinkDB
All DBs
Position
2:521584655..521680127
Genome browser
AA seq
962 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKEFALQKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENAELPE
GEKKPVDERLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESSDVPGMLAYS
LKLCMSLMQNKQFRNRVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED
NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGPEKESDSMETE
EKAGHTFGGKSPEVNPEPKDQISKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV
RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEAL
QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLG
LGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQ
HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNRAIR
RLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICC
AGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDK
HDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLS
LAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAK
KKEKEKEKKEEEKMEVDETEKKDEKEKKKEPEPSFQLLDNPARVMPAQLKVLSMTETCRY
QPFKPVSYPKPPLSPLGGIIIMKDTSEGSWKSWVEPVAAHGPKIXEEEQEPEPPEPFEYI
DD
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcggctgctggaattatttctcttctggatgaagaagaaccacagcttaag
gagtttgcactacagaaattgaatgcagtggtcaatgacttctgggcagaaatttctgag
tctgtagacaaaatagaagtcctgtatgaagatgaaggctttcgcagtcgccagtttgcc
gccctggtggcatccaaagtattctatcacctgggggctttcgaggagtctctgaactac
gctctgggagcaggtgacctcttcaatgtcaacgacaactcggaatatgtggagaccatt
atagccaaatgcatcgaccattacaccaagcagtgtgtggagaacgctgagctgcctgag
ggggaaaagaaacctgtggacgagaggctggaagggatcgtgaacaagatgtttcagaga
tgtctggacgatcacaagtacaaacaggccatcggcattgctctggagacccgcaggctg
gacgtctttgagaagaccatattggagtcgagcgacgtccccggcatgctggcttacagc
ctcaagctgtgcatgtctctgatgcagaataaacagttccgtaacagagtgctgagagtt
ctggttaaaatttacatgaacctggagaagccggacttcatcaacgtttgccagtgcttg
attttcttagatgaccctcaggctgtgagtgacatcttggagaagctggttaaagaggac
aatctcctcatggcctatcagatctgttttgacctgtacgagagcgccagccagcagttc
ctgtcttcagtgattcagaacctccgtactgttggcacccccattgcttctgtgcccggc
tcaaccaacacggggaccgttcccgggcccgagaaggaaagtgacagtatggaaacagaa
gaaaaggcaggccacacatttggtgggaagtccccagaagtgaacccagagcccaaggac
cagatctcaaaaatgattaaaattttaagtggcgaaatggcaattgagttacatctgcag
tttttaatacgaaataataacacagacctcatgattctaaaaaacacaaaggacgcggtg
cggaactctgtctgtcacacagccacagtcatagccaactcattcatgcactgcgggacg
accagcgaccagttccttagagataatttggaatggctggccagagccacgaactgggca
aagttcactgccacagccagtctgggagtgattcacaagggtcatgagaaggaagcgcta
cagttaatggcaacctacctccccaaggacacctctcccggctcggcctaccaggagggt
ggcggtctctatgcgttgggtctcattcatgccaatcacggcggtgacatcatcgattac
ctgcttaaccagctcaagaacgccagcaatgacattgtccggcacggcggcagcttgggc
cttgggttggctgcaatgggcacggcccgacaggatgtctatgatctgctgaaaacaaac
ctgtaccaggatgatgctgtgacaggagaagcagctggccttgccctgggcctggtcatg
ctgggttctaaaaatgcccaggccatcgaggacatggttggttatgcccaggagacccag
catgagaagatattacggggccttgctgttggcattgctctggtaatgtacgggaggatg
gaggaagctgacgccctcattgaatctctgtgccgcgataaggacccgatcctccgtcga
tccggaatgtacactgtcgccatggcttactgtggttcagggaacaaccgggccattcgg
cgcctgctgcacgtggcagtcagtgatgtcaatgatgatgtcagaagggctgcggtagaa
tcccttgggttcattctattcaggacgcccgaacagtgcccaagtgtggtttccttgtta
tcggagagttataatcctcatgttcgttatggagctgctatggcactaggcatctgctgt
gccgggacaggaaacaaggaagccatcaacttgctggaacccatgaccaatgaccctgtg
aattacgtgcggcaaggcgcgctcatcgcatcagctctcatcatgattcagcagacggaa
atcacttgtccaaaggtcaaccagttcagacagctgtattccaaagtcatcaatgataag
catgatgatgtcatggcaaagtttggtgctatcctggcccagggcatcttggatgcaggt
ggccacaacgtcaccatctccttgcagtctcggactgggcatacccacatgccttccgtg
gtgggtgtcctggtcttcacccaattctggttttggttcccattgtctcacttcctttcc
ctggcttatactcctacgtgtgtcatcggccttaacaaggatctcaagatgcccaaagtc
cagtacaagtccaactgcaagccgtccacttttgcgtatcctgcaccactcgaggtgccg
aaggagaaggagaaggaaaaggtttctactgctgtgctctcaatcaccgccaaggccaaa
aagaaggaaaaagagaaagaaaagaaagaggaagagaaaatggaagtggatgaaacagag
aagaaggatgagaaagaaaagaaaaaggagccggagccgagcttccagctgttggataat
ccagcccgagttatgcctgcccagctgaaggtcctctccatgactgagacctgtcgatac
cagccttttaaacctgtaagttacccaaagcctcccctctctccattggggggcatcatc
atcatgaaggacaccagtgagggatcttggaagagttgggtggaacctgtggctgctcac
ggccccaagatcngagaggaggagcaggagccggagcccccggagccctttgagtacatc
gatgactga
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