Monodelphis domestica (gray short-tailed opossum): 100015136
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Entry
100015136 CDS
T01031
Symbol
RC3H2
Name
(RefSeq) ring finger and CCCH-type domains 2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100015136 (RC3H2)
04121 Ubiquitin system [BR:
mdo04121
]
100015136 (RC3H2)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100015136 (RC3H2)
Ubiquitin system [BR:
mdo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100015136 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
100015136
NCBI-ProteinID:
XP_001365118
LinkDB
All DBs
Position
1:complement(416736163..416800897)
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AA seq
1194 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHDTPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKITATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKLVPSTNGISNAENSVSQLIPRGADTTLRALENVKKVGKVGSSGQNISGASAE
SVTENKIGSPPKTPVSNVAATSAGPPTVGTELNSVPPKSSSFVTRVPVYPQPSESIQYFP
DPRTQISFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRVNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYSSSLDGYYPMACQPPSEPRTTVPLPREPCGHLKTSYEDQLRRKP
EQWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRTEFSENVNDVRGTKFEEDHLSHY
SPWSCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPF
SDGPIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSYGS
DSTSSAHYIERDRFIVTDLSSHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWN
SLDEASHLTLNLLSKEMELRNGESDYTEDTTDTKPDRDIELELSALDTDEPDGQGEHIEE
ILDIQLAITSQNDQLLNGTTMENGHPLKQHPKEPVEPKRQSLGEDHVILEEQKAVLPVTS
CFSQPIPAPISNASCLPVTTSVSVSNLILKTAHIMSEDKNDFLKPVANGKMVNS
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggctgctcagtggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaagcccatcagtttaggttgttcacacaccgtctgcaagacc
tgcttaaataaacttcaccgaaaagcatgcccttttgaccagactgccattaacacagat
attgatgtacttcctgtaaactttgcacttctccagttagttggagcccaggtaccagat
catcaaacagtgaaattaagtaatctgggagagaacaagcactatgaggttgcaaagaaa
tgtgttgaggatttagcactctacttaaaaccattaagtggagggaagggtgtggctagt
ttgaatcagagtgcactgagccgtccaatgcaaaggaaactggtgactcttgtaaattgt
caacttgtagaagaagaaggtcgtgtaagagccatgagagcagcacgatcacttggagaa
agaactgtaactgaactgattttacaacatcagaaccctcagcaattgtctgccaatcta
tgggctgctgttagagctcgaggatgccagttcttaggaccagctatgcaagaagaagcc
ttaaagttggtgttgttggccctggaagatggttctgctctctcaaggaaagttttggta
ctttttgttgtccaaagattggaaccaagatttcctcaggcatcaaaaacaagtattgga
catgttgtgcagctactgtatcgtgcttcttgttttaaggtcacgaaaagggatgaagat
tcttctctgatgcagttaaaggaagaatttagaagttatgaggctttacggagggagcat
gatgcccagatagttcatattgctatggaagcagggcttcgtatatcacctgaacagtgg
tcttcacttctttatggtgatttggcacataaatcacatatgcagtccatcattgataag
cttcagtctccagaatcctttgcaaagagtgtccaggagttgacaattgttttgcagcgt
acgggtgatccagcaaatctaaaccgtttgaggcctcatttggagcttcttgcaaatata
gatcctaatccagatgctgtctctccaacttgggagcagctagaaaatgcaatggttgct
gtcaagacagtggtacatggacttgtggactttattcagaactacagtcgtaaaggccat
gacacaccacagcctcagccaaatagcaaatataaaactagtatgtgccgagatctgcga
cagcagggagggtgtccaagaggaacaaattgtacatttgctcattctcaggaagagctt
gaaaagtaccgtttaaggaacaaaaagatcacagcaactgtacgaacatttcctctccta
aataaagttggtgtaaataacactgtcacaaccacagctggaaatgtcatttctgtcata
ggaagtactgaaacaactgggaaacttgttccaagtaccaatgggatttcaaatgcagaa
aacagtgtttcccagttaattccacgtggtgctgacaccacattaagagctctggagaat
gtgaagaaagtagggaaggttggatccagtggtcagaatatctctggggcatctgcagaa
tctgtaactgaaaataaaattggttctccacccaagactcctgtaagtaatgtagcagct
acctcagctggaccccctactgttggaacagagctgaattctgtgcctccgaaatccagc
tcatttgtaactagagtacctgtctatcctcagccttctgaaagcattcagtattttcca
gatccaaggactcagatatcctttgaagttccacagtacccacagacaggatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgttttgtgaggtccaat
aatgttccagaatcttccctcccacctgcttccgtgccatatgctgatcattacagcaca
tttccccctcgagatcgagtgaattcttctccttaccagcctcctcctccgcagccgtat
ggaccagttcccccagtaccttctggaatgtatgctcctgtgtatgatagtcggcgcatc
tggcgtccaccaatgtaccaacgggatgacattattaggagcaattctttacctccaatg
gatgtaatgcattcgtctgtctatcagacgtctttgcgagaaagatatagtagttcccta
gatgggtattatccaatggcttgtcagccacctagtgagccaaggacaactgtaccttta
ccaagggaaccttgtggtcatttgaagaccagttatgaggatcagttaagacgaaaacca
gaacagtgggcgcaatatcatacccagaaagcaccccttgtttcttcaactcttcctgtg
gcaacacagtcaccgacaccgccttctcctctgttcagtgtagactttcgaactgagttc
tccgagaatgtaaatgatgtacgtggtacaaaatttgaggaggatcatctttcccattat
tcaccctggtcctgtggcaccataggttcttgtataaatgccattgattcagaacccaag
gatgtcattgctaattcaaatgctgtgttaatggatctggacagtggagatgttaagaga
agagtacatttatttgaaactcagagaagggcaaaagaagaagatcctataattcctttt
agtgatggacccattatctcaaaatggggtgcaatttccagatcttcccggacaggctat
cataccacagatcctattcaggccactgcttcccaaggaagtgctactaaacccatcagc
gtatcagattatgtcccctatgtcaatgctgttgattcaaggtggagttcatatggctct
gattctacttcttcagcacactatatagaaagggatagatttattgttactgatttatcc
agtcatagaaagcattccagtactggagatcttctaagcattgaacttcagcaggcaaag
agcaactcattattgcttcagagagaggccaatgcattagccatgcaacagaaatggaat
tccctagatgaagccagtcaccttaccttaaatcttctaagcaaggaaatggaattgaga
aatggagagagtgattatacagaagatacaacagatactaagcctgatagagatattgaa
ttagagctttcagcacttgacactgatgaacctgatggacaaggtgaacatatagaagag
attttggatatacaacttgctattacatctcaaaatgatcagcttctgaatggaactaca
atggaaaatggccacccactaaagcaacacccaaaggaaccagtggagcccaagagacaa
agtttaggtgaagaccatgtgattctagaggaacaaaaagcagtcctgccggtaacttct
tgctttagccagccaatcccagcacccattagcaatgcaagttgcctgccagtcaccaca
tctgtcagtgtcagcaatctcatcttgaaaacggctcatattatgtctgaggataaaaat
gactttttaaagcctgttgcaaatgggaagatggttaacagctga
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