Monodelphis domestica (gray short-tailed opossum): 100015330
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Entry
100015330 CDS
T01031
Symbol
SLC6A4
Name
(RefSeq) solute carrier family 6 member 4
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04082
Neuroactive ligand signaling
mdo04721
Synaptic vesicle cycle
mdo04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100015330 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
100015330 (SLC6A4)
04721 Synaptic vesicle cycle
100015330 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdo02000
]
100015330 (SLC6A4)
Transporters [BR:
mdo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100015330 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
100015330
NCBI-ProteinID:
XP_001369431
Ensembl:
ENSMODG00000009884
UniProt:
F6VD16
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Position
2:complement(514915601..514983952)
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AA seq
629 aa
AA seq
DB search
METTPLNSKKGQSACKDGEDCQGNGILQKGLSATGDKTEMGQISNGYSAVQSPGTEEDTR
NSIPADPALGTEDHQGERETWTKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPY
TIMAIFGGIPLFYMELALGQYHRNGCISIWKKICPIFKGIGFAICIIAFYIASYYNTIMA
WALYYLISSFTGHLPWTSCKNPWNTDNCTNYFSEGNITWTSNSISPAEEFYTRHVLQIHR
SAGLEDLGGISWQLTLCIMLIFTVVYFSIWKGVKTSGKVVWVTATFPYIILTILLIRGAT
LPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLPAFASYNKFNNNCYQDA
LVTSIVNCMTSFMSGFVIFTVLGYMAEMRNEAVSEVAKDTGPSLLFITYAEAIANMPAAT
FFAIIFFLMILTLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLAVIVACFFGSLPTL
TFGGAYVVKLLEEYATGPAVLTVVLLEAIAVSWFYGINQFCSNVKEMLGFSPGWYWRICW
VVISPIFLLFIIGSFLSSPPELRLFDYDYPRWTVLLGYCIGTSSFICIPAYITYRLIITP
GTFKERILKSITPETPTEIPFGDLRLHAV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaccccactgaattctaagaaaggccagtcagcctgcaaggatggagaagat
tgccagggaaatggcattctacagaaaggactctctgccactggggacaagacggagatg
ggacagatctcgaatgggtactcagctgttcagagcccaggcactgaagaggatacccga
aactccatcccggcagaccctgctctagggactgaagatcaccaaggggaacgagagacc
tggaccaagaagatggacttcctcctctctgtcattggctatgctgtggacctcggcaat
gtgtggcgcttcccgtatatttgctaccagaatggaggaggggctttccttatcccctat
accatcatggccatttttggtgggattcctctcttctacatggagctagctctgggccaa
tatcatcgaaatggctgtatttcaatatggaagaaaatttgccccattttcaaaggaatt
ggctttgccatttgcattattgccttctacattgcctcctactataacaccatcatggct
tgggctctctactacctcatctcttccttcacgggtcacctgccctggaccagctgcaag
aacccctggaacacagacaattgtaccaactacttttcagaaggcaacatcacttggacc
tccaactccatatcacctgctgaagaattttatacgcgccatgtcttacagatccatcgc
tctgcaggcctagaggacttgggaggcattagctggcaactgaccctctgcataatgttg
atcttcactgttgtctactttagcatctggaaaggcgtcaaaacatcgggcaaggtggtg
tgggtgacggccactttcccttacattatcttaaccatcctgcttataaggggggccacg
ctcccaggagcctggaggggtgtccttttctacctgaaacccaactggcagaagcttctt
gaaactggggtctgggtagacgccgctgctcagattttcttctctctgggtcctggcttt
ggggtcttaccagcctttgctagctacaacaagttcaataacaactgttaccaagatgcc
ctcgtgactagcatcgtaaactgcatgacgagcttcatgtctggattcgtgatcttcact
gtgctcggttatatggctgagatgaggaatgaggctgtgtcagaagtggctaaagataca
ggacccagccttcttttcatcacctatgcagaggccatcgccaacatgccagcagccaca
ttctttgctatcattttcttcttgatgatactgactctgggcttagacagcacgtttgca
ggactggaaggtgtgatcacggccgtgctggatgagttcccccacatctgggccaaacgc
cgggagtggttcgtgcttgccgtgatcgtggcctgcttcttcggctctctgcccactttg
acttttggaggggcctatgttgtgaagttgctggaggaatatgccacaggaccagcagtt
ctcacggtggtcttgttagaagcaattgctgtgtcttggttctatggcatcaaccagttc
tgcagcaacgtgaaagaaatgcttggtttcagcccgggttggtattggaggatctgctgg
gtagtgatcagcccaatatttctgctgttcatcatcggcagttttctgagcagcccccca
gagttgcgactcttcgattatgattaccctcgttggaccgtcctcctgggctactgcatc
gggacttcttccttcatctgcatccctgcctacattacttatcggttgatcatcactcca
gggacatttaaggagcgaattcttaaaagcatcactccggaaacgcctacagagattccc
tttggggacctccgcttgcatgctgtgtag
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