Monodelphis domestica (gray short-tailed opossum): 100015669
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Entry
100015669 CDS
T01031
Symbol
VPS35
Name
(RefSeq) VPS35, retromer complex component
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100015669 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100015669 (VPS35)
Membrane trafficking [BR:
mdo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
100015669 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
FerA
Imm5
ADIP
Motif
Other DBs
NCBI-GeneID:
100015669
NCBI-ProteinID:
XP_007474878
Ensembl:
ENSMODG00000012784
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All DBs
Position
1:complement(434911797..434947604)
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AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDAIMNLVSTLIQDQPDQPVEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQFLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcaccacaggatgagcaggaaaagctcctagatgaagcaatt
caggctgtgaaggttcagtcatttcagatgaaacgatgcctggacaaaaacaagcttatg
gatgctctgaaacatgcttctaacatgcttggtgaacttcgaacatctatgttgtcacca
aagagctactatgaactttatatggctatttctgatgaactacactacttggaggtctac
ttgacagatgaatttgccaaaggaaggaaagtagcagatctctatgaacttgtacagtat
gctggaaatattatcccaagactctatttacttattacagtgggagttgtttatgtcaag
tcatttcctcagtccagaaaagacattttaaaagatttggtagagatgtgccgtggtgta
cagcatcccttaagaggtttatttcttcgaaattaccttcttcagtgtaccagaaacatt
ttgccagatgaaggagagccaacagatgaagaaacaactggagacatcagtgactctatg
gattttgtacttctaaactttgcggaaatgaacaagctctgggtgcgaatgcaacatcaa
ggacacagccgggatagagagaaacgagaacgggaaagacaggaacttagaattctagtg
ggaacaaatttggtccgcctcagtcagttggaaggtgtaaatgtggaacgatataaacag
attgttttgactggtatcttggaacaagttgtgaattgcagggatgcactggctcaagaa
tatctcatggagtgtatcattcaggtctttcctgatgaatttcatctacagactctgaac
ccttttcttcgagcttgtgctgaattacaccaaaatgtaaatgtgaaaaacataatcatt
gctttaattgatagattagccttatttgctcaccgtgaagatggacctggaatcccagca
gatattaaactttttgacatattttcacagcaagtagctactgtaatacagtccaggcaa
gacatgccttcagaagatgtggtgtctttacaagtgtctctcattaaccttgccatgaag
tgctatccagatcgtgtggattatgttgataaagtgttagaaacaacggtggaaatattt
aataagctaaatctagaacatattgctaccagcagtgcagtttcaaaggagctcacaagg
ctgttgaagatacctgttgacacttataacaacattttaacagttttgaagttaaaacat
tttcatcccctctttgaatattttgactacgaatccagaaagagtatgagttgttatgtg
cttagtaatgtcctggattataacaccgaaattgtctcacaagaccaggtggatgcaatc
atgaatctagtatcaacattgattcaagaccaaccagatcaacctgtggaagacccagac
cctgaagattttgctgatgagcagagccttgtgggaagattcattcatcttcttcggtca
gatgatcctgatcagcagttcttgattttaaacacagcccggaaacattttggagcaggt
gggaaccaacgcattcgctttacactccctcccttggtatttgcagcatatcaactggct
tttcgctacaaagaaaattccaaagtggatgataaatgggagaagaagtgtcagaagatt
ttttcatttgcacatcagacaatcagtgctttaattaaagcagaattggcagagctgcct
ttacgccttttccttcaaggagctctagctgctggggaaattggttttgaaaaccatgaa
acagtggcatatgaatttatgtcccaggcattttctctgtatgaagatgaaatcagtgat
tctaaagcccagctggcagccattaccttaatcattgggacgtttgagaggatgaagtgc
ttcagtgaagagaaccatgagcccttaaggactcagtgcgccttggcagcttccaaattg
ctcaagaagccagaccaaggccgggctgttagcacatgtgcccatctcttctggtctggc
agaaacacagacaagaatggggaggagcttcatggaggcaagagagtaatggaatgccta
aagaaggctctgaagatagcgaatcagtgcatggatccctcactacaagttcagcttttt
atagaaattctgaacagatatatctatttttatgaaaaggaaaatgatgcggtgacaatt
caggttttgaatcaacttatccagaagataagagaagaccttccaaatcttgagtccagt
gaagaaacagaacagattaacaaacattttcacaataccctggaacatttgcgcttgagg
agggaatcaccagagtctgaggggccaatttatgaaggtcttgtcctttaa
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integrated database retrieval system
