Monodelphis domestica (gray short-tailed opossum): 100015996
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Entry
100015996 CDS
T01031
Symbol
USHBP1
Name
(RefSeq) USH1 protein network component harmonin binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mdo03037
]
100015996 (USHBP1)
Cilium and associated proteins [BR:
mdo03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100015996 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
KapB
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
100015996
NCBI-ProteinID:
XP_016287853
Ensembl:
ENSMODG00000015061
UniProt:
F7FHN6
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All DBs
Position
3:complement(481062832..481098808)
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AA seq
700 aa
AA seq
DB search
MMSSRATRPRSRRGRAPPPGELDPVVESTEEAEAVGSSVESEQAPRLPLKESPAEPLATS
AERNHQGHCQQLDRDRDAQTEASEPSSSLTPGKLPMMPASSPSQHHQPSGEDAPEGHGPN
LYLALQQAVESLEKVAASCRQQASSLPASTTLVPEEQGKAEEDSLRPLQRLEELVRSWSP
VGQEEGMAEQERIHYKREALSLTEQNASLRSSLKSKEEELAQDQASLQAFQDEKEMLQRQ
VWELHESLLRLDLPPALPLSQDSSMSRSSSPGAEEELWGTQQLQSISSPVISAPLSPELQ
DLEAQMEQHRRTIQRLKCFNQMLLGTLQAYKGHSEGLSMRLGQREAETTALHLALQYSEQ
CVEAYGVLLALRTVDTRTVPGLQAREGKAESAMAEAQRLLSEEDPAEAGILACVYASPEG
SSVDAPTELEVAALLQSYIGRLRAHQALVKVSPEPDSRPGLGSNVPREEAIFQAVLGAQP
NLELPRLEKTQIQQELATMREALVDLTLKLQLVKKEKRALELRDAAHRAQGTLYLLLLEQ
LQWQLGQGRPQDPLSSGESDSDSDSSCGAWIPGDGDQPAWPGGPRDSEDMLQELTNSLTR
IQELQGQLMELQSSLEQMAQDERLQRTQCLELTNDFCKAHSALVLAFRGAQRKQEQHQQT
LDQQIALMAARQEEELESLAQAAQVLEDSGVLMPWGETSL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcagccgagccacccgaccccgaagccggagggggagggcgccacccccaggg
gagctggaccctgtggtggagagcactgaagaggctgaggcagtgggaagcagtgttgag
tcagagcaggcacccaggctgcctctgaaagaatcaccagcagagcctctggccaccagt
gctgaacggaaccatcaaggccactgccaacagctggatagagacagggatgcacagaca
gaagcctcagagcccagcagtagtctgactcctggaaagctgcccatgatgcctgcctca
tccccttctcagcaccaccagccctcgggggaagatgccccagaaggtcatggccccaac
ctgtacctggccttgcagcaagcagttgagtccttagagaaggtggcagcttcctgtcgc
caacaggcctccagcctcccagcctcgactacactagtcccagaggagcagggcaaggct
gaggaggatagcctccgtcctctgcaaagactggaggagttggtcaggagctggagccct
gttggccaagaggaagggatggccgagcaggagaggatccactacaaacgggaggccctg
agtctgactgagcagaatgccagccttcggagttctctgaaaagcaaggaagaggagcta
gcccaggatcaggcctccctacaggcctttcaagatgaaaaggagatgctacagagacag
gtttgggagttgcatgagtctctgctgagactggatttgcctccagcactcccccttagc
caggatagctccatgagcagatccagcagcccaggagcagaggaagagctctggggaacc
cagcaactacaaagtatttccagtccagtaatctctgcacccctctcgccagagctacag
gacctggaggcccaaatggaacaacaccggaggactatccagaggctaaaatgcttcaac
cagatgctgctgggaaccctgcaagcctacaagggccactcagaggggctgagcatgcgg
ctgggacagagggaagctgagactactgccctgcacctcgctctacaatacagtgagcag
tgtgtggaggcctatggggtgctgttggctttacggacagtcgacaccaggaccgtccca
ggcctgcaggccagagaaggcaaagcagagtccgccatggcagaggcacagagacttttg
tcagaggaagatcctgcagaggctggcatcttggcttgtgtctatgcaagccccgagggc
agcagtgtagatgcacccacagagctggaggtggcagcactcctacagagttacattggg
aggctccgggctcaccaagccctggtgaaggtgtcccctgagccagactccagaccaggc
cttgggtctaatgtgcctcgggaagaagccatcttccaggcagtgctgggggctcagccc
aacctggagctgccaaggctggaaaagacccagattcagcaagagttggccactatgagg
gaagccctggtggacttgacactgaagctgcagctggtgaagaaggagaagcgggcactg
gagctaagagatgcagcccaccgggcacagggaactctctaccttctgctcctagagcag
ctgcagtggcagctgggccagggcaggccccaagatcccctcagctcaggggaaagtgac
agtgacagtgatagcagctgtggagcatggattcctggagatggggaccagccagcctgg
ccggggggaccccgagactcagaggatatgctgcaagaactcactaattccttgactcgg
atccaggagctgcaaggacagctaatggagctacagtcttcactggaacagatggcccag
gatgagcgactccagcgaacccagtgcttggaacttactaatgatttctgcaaggcccac
agtgccctggtgctggccttcaggggggcccagcggaagcaggagcagcatcagcagacc
ctggaccagcagatagcactgatggcagcccgtcaggaggaggagctagagtccctggcc
caagctgcccaagttctggaggactctggagtcctcatgccctggggagaaacttctctc
tag
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