Monodelphis domestica (gray short-tailed opossum): 100016049
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Entry
100016049 CDS
T01031
Symbol
RC3H1
Name
(RefSeq) ring finger and CCCH-type domains 1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100016049 (RC3H1)
04121 Ubiquitin system [BR:
mdo04121
]
100016049 (RC3H1)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100016049 (RC3H1)
Ubiquitin system [BR:
mdo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100016049 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
PaaA_PaaC
Baculo_IE-1
Vesi_VP2
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
100016049
NCBI-ProteinID:
XP_007480883
Ensembl:
ENSMODG00000004289
UniProt:
F6SY20
LinkDB
All DBs
Position
2:complement(66391821..66448693)
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AA seq
1134 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQDELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILSEE
GAVDLPSRKPTALPNGIVSAGNTVTQLIPRGTDSSYDSGLKPGKIDHLSSSAPGSPPDLL
EPGPKNISALPVTPHPVPPRGPTDLPSMPVTKPLPMVPRGSQLYSAQQADVFYQDPRGAA
PPFEPAPYPPGMYYTPTPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPIYPPHYDGRRVYPTQSYPREEIFQESPVPIEIPPAAVSPYVPEARERYQQIEGYYP
VGPHPSQIRPPYIRESYSRLPPPPLVHPSLDELHRRRKEIMAQLEERKVISPLPFAPSPT
LPHSFHTEEYLDDDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDAVAAGSVEMT
NVDSKSVRDQRLELQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTMYQGSGPMQALAA
QGASTKSISISDYSPYGAHGGWGGSPYSPHQTMPSQGHFTERERLSMSEVASHGKPLPSA
EREQLRLELQQLNHQINQHTQLRGLEAVSNRLLLQRETNTLAGQPPPQPPPPPPKWPGMV
SSEQLSLELHQVEREIGKRTRELSMENQSSLDMKNKLGPSKQAENGQPEPQNKVPAEDLA
LTFSSEVPNGSTLSQENISLLSNKTSSLTLAEDPEGGGDNNDSQRTGVTPSSAP
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccgcaatggacggatttcctctcctgcccaatttgcactcagaca
ttcgacgaaacgatccgaaagcctatcagcctaggctgtggccacactgtctgcaagatg
tgcctgaacaagcttcaccgcaaggcgtgcccctttgaccagaccactattaacaccgac
atcgagctcctgcctgtgaactcagccttgctgcaattagtgggtgctcaggttcctgag
caacagcccattactttatgtagtggggtagaagatacaaaacattatgaggaagcaaag
aaatgtgtagaagaattagcattgtatctgaaaccactcagcagtgctagaggagtaggt
ctgaacagcaccactcagagtgttctgagtcgcccaatgcagaggaaattggtgacatta
gtccactgccagttagtggaagaagaaggtcggattcgtgccatgagggcagctcgatct
ttaggtgaaaggactgtcacagaactaatcctccagcaccagaatcctcaacagctttcc
tcaaatctttgggcagcagtcagggccaggggttgccagttccttggaccagcaatgcag
gaggaagccctaaagctggtcttactggccttagaagatggatctgctttgtctcggaaa
gtcttggttctatttgtggtgcaaagattggagccacgatttcctcaggcctcaaaaacc
agcattggacatgttgttcagctattgtacagagcctcctgtttcaaggtgacaaaacgt
gatgaagattcctccttaatgcaattgaaggaggaatttaggacatatgaagctcttcgt
cgggaacatgactcccagatcgtgcagattgccatggaggcaggcttgcgcattgcccca
gaccaatggtcttcccttctttatggagaccaatcgcataaatctcatatgcagtccatt
attgacaagttgcagaccccagcctcatttgcacagagcgttcaggaactaacaattgct
cttcagaggactggtgaccctgcaaatctgaaccgcctgcgaccccatctggagctgtta
gcaaatattgaccctagtccagatgcccctcccccaacctgggaacaactagaaaatggg
ttggtcgctgtgcgaacagtggtgcatggactagttgattatattcagaatcacagcaag
aaaggaacagatcagcagcagcctcctcagcacagcaagtataaaacttacatgtgccga
gacatgaaacagagaggagggtgcccccggggggccagctgcacatttgcacactctcag
gatgaattggaaaaatttcgtaaaatgaacaaacgtctggttcccagaagacccctgagt
gcctccttaggccagctcaatgaggtgggcctaccttcagcagctatcctttcagaagaa
ggggcagtggacctgcccagcagaaaacctactgccctgccgaatgggattgtgtcagca
gggaacacagtgacacagctgatcccccgagggacggactccagctacgactctggtctg
aagccagggaagattgatcacctgagcagcagtgctcctggatcccctcctgacctactg
gaacctggacccaagaacatttctgccttacctgtgactcctcaccctgtacctcccagg
ggaccaacagacctgccttccatgcctgttaccaaacctcttcctatggtaccacgaggc
tcccagctatactcagcacaacaagcagatgtgttttatcaggatcctcgaggggctgct
ccaccttttgagccagcaccttatccaccagggatgtactatactccaaccccgcagtgt
gtctcccgctttgtccgacctccaccatctgctcctgaacctggtcctccatacttggat
cattacccaccctacctccaggatcgtgtagtaaattcccagtacgggactcagccacaa
cagtatccacccatatatccaccacattatgatggccgtcgtgtctaccccacacagtca
tatcctcgagaagagattttccaggaaagcccagtacccattgagattccacctgcagct
gtttcaccttatgtaccagaggccagagagagataccagcaaatagagggttactatcca
gtgggtccacatccaagtcagataagacctccatatatcagagagtcttacagcagacta
ccacctcctcctctggtccaccctagtctagatgagttgcatcgacggcgaaaagagatc
atggcccagttagaagagagaaaagtcatctccccacttccttttgcaccttcaccaacc
ttgcctcactcattccatacagaggaatatttggatgatgacctgaaagttgctgggaaa
tacaaagggaatgattacagccagtactcaccttggtcatgtgacaccattggctcctac
attgggaccaaagatgcaaaacccaaagatgctgtggcagcaggcagtgtggagatgacg
aatgtggacagtaaaagtgtgagggaccagcggctagagcttcaacgaagggcagcagaa
accagtgatgatgacctcatcccatttggtgaccggcccacagtttcacggtttggcgcc
atatctcgaacttccaagactatgtatcagggttctggtccaatgcaggctctggcagct
cagggagcttccaccaaatcaataagcatttctgattacagtccatatggagctcatggt
ggctggggtggttctccatattcccctcatcaaactatgccttctcagggacacttcact
gaaagggagagattgtccatgtcggaagtggccagtcatgggaagcccttaccctctgct
gagagagaacaactgagactagagctgcagcagttaaaccaccagattaaccagcacacc
cagcttcgaggacttgaggctgttagtaacaggctgctgttgcagagggagacgaacact
ctggcaggccagccccctcctcagcccccaccaccaccccccaagtggcctggaatggtc
tcaagtgagcagttgagcttggaactacaccaggtggagcgggaaattgggaagagaact
cgggaactgagcatggagaatcaatcttctctggacatgaaaaacaaattgggtcccagt
aagcaagcagaaaatggacaaccagaaccacaaaacaaggttccagctgaggaccttgca
ttgacattcagtagtgaagtgccgaatggatcaaccttatcacaggagaacatcagcctc
ctgtcaaacaagacctcctctttgaccctggctgaggatcctgaaggaggaggagataac
aatgactctcagaggacaggagtcacgcccagctctgccccctaa
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integrated database retrieval system
