Monodelphis domestica (gray short-tailed opossum): 100016125
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Entry
100016125 CDS
T01031
Name
(RefSeq) protocadherin beta-2-like
KO
K16494
protocadherin beta
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mdo04515
]
100016125
Cell adhesion molecules [BR:
mdo04515
]
Cadherins
Protocadherins
100016125
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
He_PIG
MAP17
Syndecan
CPT_N
Motif
Other DBs
NCBI-GeneID:
100016125
NCBI-ProteinID:
XP_001370051
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Position
Un
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AA seq
796 aa
AA seq
DB search
METGENTIRKQRQVLLFFVFLCMPKAGSEPRRFSVAEEMESGSFVGNVIKALGLEMGELS
NRGARVVFEGVRQYLQFNRKTWDLLVKEKLDREELCGPTVSCVLPFQILLENPLQIFLAE
LLVEDINDHSPIFLDNEMLLKIPESSLPGKIIRLDGAQDLDVGINSLQNYTVSPNPHFQV
QIRARSEGRKYPELVLNKALDREELPEIRLTLTALDGGSPPRSGTAQIRVLIVDVNDNAP
EFGRQNYEVRIPENSPPGSLVVEVHAADLDTGNYGEIFYTFSDASEDIRKTFKIDGSSGE
ISLIKTVDFEATQFYEIDIEATDGGGLSGKCTVVIHVIDLNDNLPKLTISSITNPIPENS
PETVVAVFRVSDLDSGENGRMVCSIQDDLPFSLKPSVENYYTLVTEGALDRERRAEYNIT
ITVMDLGSPRLKTEHNITIWISDINDNPPVFTLTAYKLYLQENNSPALHIGSVSARDRDS
GINAKVTYSLLPPENGDLPLFSYISINSDNGHLYALRSLDYEAIQAFQFTVTATDGGSPS
LSSQALVQVVVQDMNDNSPFVLYPLQNGTAPCNDLVPRTAEPGYLVTKVVAVDRDWGQNS
WLSYQLLKATDPGLFTVWAHNGEVRTARPISDRDAIKQRLLVLVKDNGQPPLSTAATLNV
LLVYGFSEPYMQFPDAPKEQVQTGSLTTYLVISLASVSFLFLVSVIMFIAIRLWKRNRDA
SDGSQFEPNGPFPGYLLDANGTGTLSQSYQYEMCLTSGSWTNEFKFLKPIIPRNPAQEGR
SDLEENPSFRNSCNFS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaggcgagaacacaattcggaaacaaaggcaagttctccttttctttgttttc
ctgtgcatgcctaaggcgggttcggaacccagaaggttttctgtagcagaggaaatggaa
agtggctcttttgtaggcaatgtgattaaggctctgggactagaaatgggggagctatct
aataggggcgcccgggtcgttttcgaaggagtcagacagtatttgcagttcaatcgtaaa
acctgggatctacttgtaaaagagaaactggaccgggaggaattgtgtgggcctaccgtt
tcctgcgtattgcctttccagatcttattagaaaacccattgcaaatttttctggctgag
ctgctagtagaagacataaatgaccattcgcctatattcctggacaatgagatgctcctg
aaaatccccgagagtagtcttccgggaaagataatccgtttagacggtgcacaggattta
gatgttgggatcaacagtctccaaaactacactgttagcccgaatccccatttccaagtt
caaatacgggcacgcagtgagggcaggaagtacccagaattggtgttgaacaaagctctt
gatcgagaggaattgccggagatccgattaactctcacagctttggatggcgggtctccg
cccaggtctgggactgcccaaattcgagttctcatagtggatgtcaatgataatgcgcct
gagtttgggcgacagaattatgaggtgaggattcccgaaaatagccccccaggctccctg
gttgtagaggtgcatgctgcagatttggatacaggaaattacggggaaatattttacaca
ttttctgatgcctccgaagacattcgcaaaacttttaagatagatggatcttcaggtgaa
atttcactaataaaaacagtggattttgaagcaactcagttttatgaaattgatattgaa
gccacagatggtggaggtctttctggaaaatgtacagtcgtaatccatgtgatagatctg
aatgacaatctgcctaaactgactatatcctcgattaccaatcccatcccagagaattca
cctgagactgtagtagctgttttcagagtttcagatttggattcgggggaaaatggaagg
atggtttgttccatccaagatgatcttcctttttccctgaaaccttctgttgagaattat
tacacgctggtaacagaaggagcactagacagagagaggagagctgagtacaatatcact
attactgtcatggatttggggtccccaaggctcaaaactgaacacaatatcaccatatgg
atctctgacatcaatgataaccctccagtgtttactctgacagcctacaaactgtacctc
caggagaacaacagtcctgccctccacattggcagtgtcagtgccagggatagggactca
ggaatcaatgccaaagtcacttactccctgctgcccccagagaatggagacctgcctctc
ttctcctacatctccatcaactcagacaatggccatctctatgctctgaggtccctggat
tatgaagccatccaagctttccagttcacggtgacagcaactgatggtggttccccatct
ctgagcagccaggctttggttcaagttgtggtacaggatatgaatgacaactctcccttt
gtgctgtaccccttgcagaatggcacagctccctgcaatgacctggtgcccaggactgca
gagccaggttacctggtcactaaggttgtggctgtggatagagactggggacagaattcc
tggctttcctaccagctgctcaaggccacagatccaggactcttcactgtgtgggcccac
aatggagaagttcgaacagcaagacccatcagtgacagagatgccatcaagcagaggctc
ctggttctggtgaaggacaatgggcagcctcctctgtccacagcagccacactgaatgtt
ctcctagtatatggcttctctgaaccctacatgcaattcccagatgcacccaaggagcaa
gttcagactggttccctcaccacttatctagtcatttccctggcctctgtctcctttctc
ttcttggtctctgttattatgttcattgctattcgcttgtggaagaggaatagggatgcc
agtgatggtagtcaatttgaaccaaatggtcctttcccaggctacttattggatgccaat
gggacagggaccttgtcccagagttaccagtatgagatgtgtctgaccagtggttcatgg
acaaatgaattcaaattcttaaagcccattatccccaggaaccctgctcaagagggtagg
agtgatttggaggaaaacccatcctttaggaatagctgtaacttcagttag
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