KEGG   Monodelphis domestica (gray short-tailed opossum): 100016157
Entry
100016157         CDS       T01031                                 
Symbol
DDB2
Name
(RefSeq) damage specific DNA binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03420  Nucleotide excision repair
mdo04115  p53 signaling pathway
mdo04120  Ubiquitin mediated proteolysis
mdo05161  Hepatitis B
mdo05169  Epstein-Barr virus infection
mdo05200  Pathways in cancer
mdo05202  Transcriptional misregulation in cancer
mdo05210  Colorectal cancer
mdo05212  Pancreatic cancer
mdo05213  Endometrial cancer
mdo05214  Glioma
mdo05216  Thyroid cancer
mdo05217  Basal cell carcinoma
mdo05218  Melanoma
mdo05220  Chronic myeloid leukemia
mdo05222  Small cell lung cancer
mdo05223  Non-small cell lung cancer
mdo05224  Breast cancer
mdo05225  Hepatocellular carcinoma
mdo05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100016157 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100016157 (DDB2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100016157 (DDB2)
   05202 Transcriptional misregulation in cancer
    100016157 (DDB2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    100016157 (DDB2)
   05212 Pancreatic cancer
    100016157 (DDB2)
   05225 Hepatocellular carcinoma
    100016157 (DDB2)
   05226 Gastric cancer
    100016157 (DDB2)
   05214 Glioma
    100016157 (DDB2)
   05216 Thyroid cancer
    100016157 (DDB2)
   05220 Chronic myeloid leukemia
    100016157 (DDB2)
   05217 Basal cell carcinoma
    100016157 (DDB2)
   05218 Melanoma
    100016157 (DDB2)
   05213 Endometrial cancer
    100016157 (DDB2)
   05224 Breast cancer
    100016157 (DDB2)
   05222 Small cell lung cancer
    100016157 (DDB2)
   05223 Non-small cell lung cancer
    100016157 (DDB2)
  09172 Infectious disease: viral
   05161 Hepatitis B
    100016157 (DDB2)
   05169 Epstein-Barr virus infection
    100016157 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdo04121]
    100016157 (DDB2)
   03400 DNA repair and recombination proteins [BR:mdo03400]
    100016157 (DDB2)
Ubiquitin system [BR:mdo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100016157 (DDB2)
DNA repair and recombination proteins [BR:mdo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100016157 (DDB2)
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR75_1st WDR55 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_EML ANAPC4_WD40 EIF3I Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_Vps41 Ge1_WD40 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 100016157
NCBI-ProteinID: XP_007497471
Ensembl: ENSMODG00000019904
UniProt: F6VQA5
LinkDB
Position
5:284172965..284186957
AA seq 480 aa
MAPKRLAGRGKRSFLPPEPPPAKRRCVWTPGRGCRPPARGLGQRDGASGWNQTGLTGQRE
YPHSIIWALCQRKLGRAPRASFQQCLQQTFLHSLDSYRLFRTASPFDRRTTCLEWHPAHP
STLAVGSKGGDIILWDYEVLNKTYFIKGIGAGGSITGMKFNPLNTNQLFISSVEGTTTLK
DFLGNTIRVFTRTNTWDNWYTSVDVSAKSRVVVTGDSVGNVILLNMDGKEVWNLRLHKKK
VTHVALNPHCDWLLATASVDQTVKIWDLRQVRGKSCFVHWMPHERAVNAAYFSPDGARLL
TTDQHSEIRVYSASHWTSPQLLIPHPHRHFQHLTPIKATWHPCYDLIVVGRYPDPNFAGF
TPHEPRTVDLFDGNSGKMVCQLHDPDCSGIISLNKFNPMGDTLASTMGYNILIWSPEEAV
RRKQEGLIKAMSEQGLGRDCLAHRCSRRSRPGPTSSRKQQKCLCLQGDARSKCKRKDPGL
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggctcctaagcgactggcgggccgcggcaagaggagcttcctgcctccggagccgccc
ccggccaagaggcggtgtgtgtggactcctggccgcggatgccggccgccagcccggggc
ttgggccaaagggatggtgcttcaggctggaatcagactgggttgactggtcagagggaa
taccctcatagcatcatctgggctctatgccaacgtaagctgggcagagctcctcgggca
tcgttccagcagtgtcttcagcagacctttttgcactctctggactcttaccgacttttc
cgaacagctagtccctttgatcggagaacaacgtgcctggagtggcatccagctcacccc
agcactctggctgtgggttccaagggtggagacatcatcctctgggactacgaagtgctg
aacaaaacctatttcattaaagggataggagcaggagggagcatcactgggatgaagttt
aaccctctcaataccaaccagctgttcatttcttcagtggaggggaccaccaccctgaag
gactttctgggcaacacaattcgagttttcaccagaacaaacacttgggacaattggtac
accagtgtggatgtgtctgccaaaagccgtgtggtggtcacaggagacagtgtgggcaat
gtgattttgctgaacatggatggcaaagaggtctggaatcttagacttcacaaaaagaag
gtgacccatgtagctctgaatcctcactgtgactggttgctggccacagcctcagtggac
caaacggtgaaaatttgggacctgcgccaggtcagagggaaatcttgcttcgttcactgg
atgcctcatgagcgtgctgtcaatgcagcttatttcagtccagacggggccagactcttg
accacagaccagcacagcgagatccgggtgtactcggcctcccattggacaagtcctcag
cttctcattccgcaccctcatcgccacttccagcacctcacgcccatcaaggcaacatgg
catccttgttatgacctcattgtggtggggcggtacccagaccccaattttgcaggtttc
actcctcatgagcctcggacggttgacttatttgatgggaactcagggaagatggtgtgt
cagcttcatgatccagactgctctggcatcatttcgctaaacaagtttaatcccatgggg
gacactttggcctctacaatgggttacaacattcttatctggagcccagaggaggctgtg
agaaggaagcaggagggactgatcaaggccatgagtgaacaaggactagggagggactgt
ttagcccaccggtgctcccgtcgaagcaggcctggcccaacctctagtagaaagcagcag
aaatgtctgtgcctacaaggggatgcaagaagcaaatgcaaaagaaaggatccagggctc
taa

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