Monodelphis domestica (gray short-tailed opossum): 100016189
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Entry
100016189 CDS
T01031
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdo04040
]
100016189
Ion channels [BR:
mdo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100016189
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Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Motif
Other DBs
NCBI-GeneID:
100016189
NCBI-ProteinID:
XP_016288732
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Position
4:348443648..348496725
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AA seq
1228 aa
AA seq
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MHLREGTCGCPLSLTVPCLHMAPVKISHVVSFSSQDSRYPVENLLDLNEPIRPWLSSPRD
HSGQLRVELQLERAVPISYIDVGNCGCAFLQVDVGRSSWTPGRPFLTLLPMATLMSPADS
KMGKNRSGVRMFKDGDFLASTASESWDRLRVTCNQPFNRQQPFGLAFLRVRSQLEPREEP
ESSQVPDQSQVEPSGRESQACPWLDSPAIRRTFFPDPQPSMEQVTELRGRLQQLQPGALG
RSAHMVLSAASRALPSTSKSRGCRQREASPNPTASSDVPEAKDQGSWEQNSKNESSRTKR
QKLQNTRRRSPASLRPRQHRKVKPARQPPQPQTSSDHGQESGQCPICAGSFSFEVLPLHA
AACGETPPPQQASPSSSSSSSLQPLPLTPKPQPNWNEIVNRKLRFPAPLLGAIQEGRLGL
VQQLLEAAGTEASGGGGGGGPQRQLEEAEDRSWREALNLAIRLGHEAITDVLLAQVKFDF
RQIHEALLVAVDTNQPTVVRRLLARLDREKGRKVDTKSFSLAFFDSSIDGSRFAPGVTPL
TLACQKDLYEIAQLLMSQGHAIARPHPISCACLECGNARRYDLLKFSLSRINTYRGIASR
AHLSLASEDAMLAAFQLSRELRRLARKEPEFKFVAHPICQQVLSSIWCGNLAGWRGSTTA
WKLFVSFIIFLTMPFLCLGYWLAPKSKLGRLLKIPVLKFLIHSASYLWFHIFLLGESLVM
ETQLVTFKGRSQSVWENSLHMIWVAGFLWFECKEVWIEGLRSYFLDWWNFLDVVILSLYL
AAFALRVLLAVLARLHCQDAPDGAACRYFTTAERKEWRTEDPQFVAEVLFAITSMLSFTR
LAYILPAHESLGTLQISIGKMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETERLGNFN
ETFQFLFWTMFGMEEHSVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQK
IEDDADVEWKFARSKLYLSFFREGLTLPVPFNILPSPKSFFYLLRRIFRFFCCCCCKTKG
PAYPPIPTFANSGIGAGTGDGESGSYRVRVIKALVQRYIETARREFEESRRKDLGNRLTE
LTKTVSRLQGEVAGVRKTLAEGGPSRLPDGASILSRYITRVRNSFQNLGPTIPETPELRG
REEETGFIVPEVIGTQIPEETGTQESRAPEAGTQDPDDLGRNEIQAFGGSYKISSAQVVI
HRGFGERGDVPPEEGPVAGHDPPAPGAK
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgagagaagggacttgtggttgccctctttctctgactgttccatgcctccac
atggctcctgtgaagatcagccatgtggtatcattctcctctcaggactctaggtacccc
gtggaaaacctcctggacctaaatgaaccaataaggccttggctcagctcccctcgagac
cacagtgggcagctcagggtggaactgcaactagaacgtgctgtgcccatcagttacatt
gacgtggggaactgcggttgcgccttcttgcaagtggatgtaggacgctcctcctggacc
ccaggcaggccttttctgaccttgcttcccatggccacattgatgtcaccggctgactcc
aagatggggaagaaccgatcaggggttcgcatgtttaaagatggggattttctggcctcc
acagcaagcgagagctgggataggcttcgagtgacttgcaaccagcccttcaaccgtcag
cagccctttggcctcgcgttccttcgtgtacgttctcagctggagccaagagaggagcct
gagagttctcaagtccctgaccaaagccaggtggagccctctggccgagaatctcaagcc
tgcccttggcttgacagccctgccatcaggaggacattcttcccagatccacagccgagc
atggagcaggtgactgagctcaggggccgcctacagcaattacagcctggggctttagga
cgatcagctcacatggtgctttctgctgccagccgggcccttccatctacctcaaagagc
cgtggatgccgccaaagagaagcatcccccaaccctacagccagctcagatgtccctgag
gccaaggatcaggggtcatgggagcagaactcaaagaatgaatcaagtaggacaaagaga
cagaaactacaaaacacaagaagaaggtctccagcctccttgcgtccacggcaacacagg
aaggtgaagccagcacgacagcccccccagccacagaccagtagtgaccatggtcaggag
agtggccagtgccccatctgtgcagggtccttcagctttgaagtccttcccctccatgct
gccgcctgtggagagacccccccacctcaacaagcctcaccctcctcctcttcttcctcc
tcattacaacctctccctctcacccccaagccccagcccaactggaacgagattgtgaac
aggaaactccgctttcctgccccgctgcttggtgctattcaggagggtcgactgggcctg
gtccagcagctgctggaagctgcagggactgaggcaagtgggggtgggggaggtgggggg
ccgcaacgccagctggaggaggcagaggatcgctcttggagagaagccttgaacctggcc
atccggctgggccacgaagccatcactgatgtcctgttggcccaggtcaagtttgatttc
cggcagatccatgaggctcttctggtggcagtggacacaaaccagcccacagtagtgcgc
cgccttctggccaggctggatcgtgagaaaggccgcaaggtggacactaagtccttctct
ctggccttctttgactcgtccattgatgggtcccgttttgcccctggggttacaccgctc
acactggcctgtcagaaggacttgtatgaaattgcccaactgctcatgagtcagggccat
gccatcgcccgtccccatcccatctcctgtgcttgtttggagtgtggcaatgcccgccgc
tatgacctgctcaagttctccctctctcggattaacacctatcggggcattgccagccgt
gcccacctctccctggccagcgaagatgccatgctggctgccttccagctcagccgagag
ctcaggcgtctggcccgcaaggagcccgagttcaagtttgtagctcaccccatctgccag
caggtcctctcctccatctggtgtggaaacctggcaggctggaggggcagcaccacagcc
tggaagctgtttgtctccttcatcattttcctcaccatgcccttcctctgcctgggctac
tggctagcacccaagtcaaagctgggtcgtctgctgaagatcccagtgctcaaatttcta
atacactcggcctcctacttatggttccacatcttcctgctgggagagtcactggtcatg
gagactcagctagtcaccttcaagggtcgcagtcagagtgtctgggaaaactcactgcac
atgatctgggttgcaggcttcctgtggttcgaatgtaaggaggtgtggattgaggggctg
cgaagctacttcctggactggtggaacttcctggacgtggtcatcctgtccctgtacctg
gctgcctttgccctccgagtgctcctcgccgtgttagccaggctgcactgccaggatgcc
ccagatggtgctgcctgtcgctacttcaccacagctgaacgcaaggagtggcgcaccgaa
gacccccagtttgtggctgaagtcctgtttgccatcaccagtatgctgagcttcacccgc
ttggcctacatcctacctgctcacgagtccctgggtaccctgcagatctctattggcaag
atgattgatgatatgatccggttcatgttcatccttatgatcatcctaacagcctttctt
tgtggcctcaacaacatctatgtgccctaccaggagaccgagaggctgggcaacttcaat
gaaacattccagtttctcttctggacaatgtttggtatggaggagcacagtgtggtggac
atgccgcagttcctagtgcctgagtttgtgggacgtgctctctatggtatcttcaccatt
gtcatggtcatcgtgctactcaacatgctcattgccatgatcaccaactccttccagaag
atcgaggatgacgctgatgtggaatggaagtttgcccgctccaagctctacctatccttc
tttcgagagggcctgacactgcctgttcccttcaatatcttaccttcacccaagtccttc
ttctatctgctcaggagaatcttccgatttttttgttgctgctgctgcaagaccaagggg
cctgcctatcctcccatccccacttttgcaaactctgggattggggctgggactggggac
ggtgagagtggctcctatcgggtccgagtcatcaaggccttggtgcaacgctacattgag
actgcaaggcgcgagttcgaagagagccgtcggaaagaccttggcaaccgactcacagag
ctgaccaagaccgtgtccagactgcagggtgaggtggctggtgtacggaagacactggct
gagggcggaccttcccggctccccgatggtgccagcatcctgagccgctacataacccgt
gtccgaaatagcttccaaaatctcggacccaccatccccgaaacccctgaattgagagga
agagaggaagaaacaggatttatagtgcctgaggtaatagggacacagatacccgaggaa
acggggacccaggagtccagagccccggaagcaggaacccaagatcctgacgatcttggc
aggaatgagatccaggcatttgggggttcatacaaaatttcttctgcccaggtggtgatt
cacagggggtttggggaaaggggagatgtgcctccagaggaaggaccggtggctgggcat
gatcccccagccccaggagctaaataa
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