KEGG T01031: 100016249

Monodelphis domestica (gray short-tailed opossum): 100016249

Entry

100016249         CDS       T01031

Symbol

POLR2C

Name

(RefSeq) RNA polymerase II subunit C

K03011

DNA-directed RNA polymerase II subunit RPB3

Organism

mdo Monodelphis domestica (gray short-tailed opossum)

Pathway

mdo03020

RNA polymerase

mdo03420

Nucleotide excision repair

mdo05016

Huntington disease

Brite

KEGG Orthology (KO) [BR:mdo00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100016249 (POLR2C)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100016249 (POLR2C)
09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100016249 (POLR2C)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdo03021]
    100016249 (POLR2C)
   03400 DNA repair and recombination proteins [BR:mdo03400]
    100016249 (POLR2C)
Transcription machinery [BR:mdo03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     100016249 (POLR2C)
DNA repair and recombination proteins [BR:mdo03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100016249 (POLR2C)

SSDB

Motif

Pfam:

RNA_pol_A_bac RNA_pol_L

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

1:448741118..448747631

AA seq 275 aa
MPYANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLH
DEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDL
ISNTPRVIPVTSRSRDNDPSDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPKPEEWPKSEYSEIDEDEAQAPYDPNGKPERFYYNVESCGSLR
PETIVLSALSGLKKKLSDLQTQLTHEIQSDVLTIN

NT seq 828 nt +upstreamnt +downstreamnt
atgccttacgccaaccagcctacggtgcgaatcaccgagctcacggacgagaacgtcaag
tttattatcgagaatacggacctggcagtggccaattccatccgtagagtcttcatcgcc
gaggtgcccatcatagccatagactgggtccagattgatgccaactcttcagttcttcat
gatgagttcattgcccaccgacttggattaatccctcttacaagtgatgacattgtagat
aagctgcaatactccagggactgtacgtgtgaagagttttgccctgagtgctcagtagag
tttacgcttgatgtccgttgcaatgaagaccagacccgccatgtcacatctcgggatctc
atttctaatacccctcgagtcattccggtgacatcccggagtagagacaatgaccccagt
gactatgtggaacaggatgacatcctcattgtcaaactccggaaaggccaggaactgaga
ttacgagcctatgctaaaaagggctttggcaaggagcatgctaaatggaaccctacagct
ggagtagcctttgagtatgacccagataatgctctgaggcatacagtctacccaaagcca
gaagaatggccaaagagtgagtactctgagattgacgaagatgaagcccaagctccctat
gaccccaatggcaaaccagagaggttctactacaatgtggaatcctgtggctctcttcgc
cctgaaaccatcgtcctttctgctttgtctggtttgaagaagaagttgagtgaccttcag
acccagctaacccacgagatccagagtgatgtcctgactataaactag

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