Monodelphis domestica (gray short-tailed opossum): 100016253
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Entry
100016253 CDS
T01031
Symbol
GTF2B
Name
(RefSeq) general transcription factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03022
Basal transcription factors
mdo05017
Spinocerebellar ataxia
mdo05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100016253 (GTF2B)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100016253 (GTF2B)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100016253 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100016253 (GTF2B)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
100016253 (GTF2B)
Prokaryotic type
Archaeal type
TFB
100016253 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
Sigma70_r4
RB_B
KIF9
Motif
Other DBs
NCBI-GeneID:
100016253
NCBI-ProteinID:
XP_001364333
Ensembl:
ENSMODG00000012414
UniProt:
F6PMC9
LinkDB
All DBs
Position
2:15835270..15883213
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AA seq
316 aa
AA seq
DB search
MASTSRLDVLPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDSQNPLLSDGDLTTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PADFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccagccgactggatgtccttccaagagttacatgtccaaaccacccagat
gctattttggtggaggactacagagctggagacatgatctgtcctgaatgtgggctggtt
gttggtgatcgtgtaatagatgtgggatctgagtggagaaccttcagcaatgacaaagca
accaaagacccatctcgagttggagactcccagaatcccctcttgagtgatggagacttg
actacgatgattggcaaaggcacaggagcagccagctttgatgaatttggaaattcaaag
tatcaaaatcgcagaactatgagcagttctgatcgtgcaatgatgaatgctttcaaagaa
attactaccatggcagacagaatcaacctccctcgaaatatagttgatcgaacaaataat
ttattcaagcaagtgtatgaacagaagagcctgaaggggagagctaatgatgccatagct
tctgcttgtctctatatcgcctgtagacaagaaggcgttcctagaacatttaaagaaata
tgtgctgtatcacggatttccaagaaagaaataggccgatgttttaagctcattttgaaa
gcactagaaaccagtgtggatttgatcacaacaggggatttcatgtcgagattttgctcc
aaccttggtcttcctaagcaagtacagatggcagccacacacattgcccgcaaggctgtg
gagctggacctggtgcctgggaggagccccatttctgtggctgctgcagccatctacatg
gcctcccaagcctctgcggaaaaaaggacccagaaagaaattggagacatagcgggagtc
gccgacgttactatccggcagtcttatagactcatctatcctcgagccccagatctgttc
cctgcagacttcaaatttgacacccctgtggacaaactcccccagctgtaa
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