Monodelphis domestica (gray short-tailed opossum): 100016293
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Entry
100016293 CDS
T01031
Symbol
CDH20
Name
(RefSeq) cadherin 20
KO
K06807
cadherin 20, type 2
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mdo04515
]
100016293 (CDH20)
Cell adhesion molecules [BR:
mdo04515
]
Cadherins
Major cadherins
100016293 (CDH20)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
TAS2R
Wzy_C
Motif
Other DBs
NCBI-GeneID:
100016293
NCBI-ProteinID:
XP_001364985
Ensembl:
ENSMODG00000004905
UniProt:
F7C1R7
LinkDB
All DBs
Position
3:140546700..140833892
Genome browser
AA seq
819 aa
AA seq
DB search
MWTSGRMSKAKSWLGLGMSLYFCGLMDLTTTVLSVTPMPLKELEEHLSDKPHLPHRMKRS
WVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQ
RLDREERAQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYVATVPEMSPV
GTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSKTGVIRTALMNMDREAKEYYEV
IIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMSVLESAPVSSTVGRVFAKD
LDEGINAEMKYTIVDGDGLDTFDINTDPSFQVGIITVRKPLSFESKKSYTLKVEGSNPHL
EVRFLNLGPFQDTTTVHISVEDVDEPPIFDPGFYFVEVPEDVEIGTTIQIISAKDPDVTN
NSIRYSIDRSSDPGRFFYVDITTGALMTARPLDREEISWHNITVLAMEMNNPSQIGSVSV
TVKVLDVNDNAPEFPRFYEAFVCENAKAGQLIQTVSAIDQDDPQDGQHFYYSLAPEAANN
PNFTLRDNQDNTARILTRRSGFRQQEQNVFYLPILIADNGRPMLSSTGTLTVQVCSCDDE
GDVMSCSAEAYMLPVSLSRGALIAILACIFVLLVLVLLILSMRRHRKQPYIIDDEENIHE
NIVRYDDEGGGEEDTEAFDIAAMWNPREAQTGAVAKTRQDMLPEIESLSRYVPQTCTMDS
NVHSYVLAKLYEADMDLWAPPFDSLQTYMFEGDGSVAESLSSLQSVTSDSDQSYDFLTDW
GPRFRKLAEIYGFCWLTKPQKSTHTKENKKLRSQYFCVK
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtggacctctggtagaatgagcaaagcaaagagttggcttggacttggcatgtccttg
tatttttgtgggttaatggaccttacaaccacggtgctgtctgtcactcccatgcccctc
aaagaactggaagaacatctgtcggacaagccacatttgccccatcgaatgaaaagaagt
tgggtttggaatcaattctttgttctggaagaatacactggaactgatcctttgtatgtt
ggcaagcttcattcagatatggacaggggtgacggttctatcaaatacattctgtcagga
gaaggagctgggattgtgttcacaattgatgataccactggagacatccatgcaattcag
agactggatcgagaagaaagggcccagtacacattaagggcacaagccctggacaggcgg
acaggcaggcctatggagcctgaatcagagttcattattaaaatccaagacatcaatgat
aatgagcccaaatttctggatggaccttacgtagctactgtgccagaaatgtcccctgtg
ggaacctcagttatccaggtgacagcaactgatgctgatgatccaacgtatggaaacagt
gctagggtggtatacagcattcttcagggccaaccatatttttctgtggactctaaaaca
ggtgtaattaggacagcacttatgaacatggacagagaagcgaaagaatactatgaagtg
attatacaagccaaggatatgggaggacagcttggaggattagctggaacaaccacagtc
aacattactctctctgatgtcaatgataatccaccccgttttccacagaagcactaccag
atgagtgtgttggaatcagctccagttagttctacagtgggacgtgtatttgccaaagat
ctggatgaaggaatcaatgcagaaatgaagtacaccatagtagatggagatggcctagac
acctttgacatcaatacagatccaagtttccaagttggcatcataacagttaggaagcca
ctgagttttgaaagcaagaaaagctacactttaaaagtagaggggtccaatccccacctg
gaagttcgttttctgaacctgggccctttccaagatacaaccacagtacacatcagcgtg
gaagacgtagatgaaccacccatatttgatcctggcttttattttgtggaggtgcctgaa
gatgtggagattggaaccaccatacagatcatttctgccaaggacccagatgtgaccaac
aactcaatcaggtattcaattgacagaagcagtgaccctgggagattcttttatgttgac
atcacaacaggagctcttatgactgcaagaccccttgaccgagaagagatttcatggcat
aatatcactgtcctggctatggaaatgaacaacccctcacaaattggaagtgtttccgtc
acagtgaaggtcttggatgtgaatgacaatgctcctgagtttccccgattctatgaagcc
tttgtatgtgaaaatgccaaagcggggcagctgattcagaccgtgagcgcaatagaccag
gatgacccacaagatggtcagcacttctactacagcttggctcctgaggcagctaacaac
cccaacttcactctaagggacaatcaagacaatactgcccggatccttaccaggagatct
ggctttagacaacaggagcagaatgtcttttaccttccaatcctgattgcagacaatgga
aggcccatgctgagtagcacaggcacactgacagtccaggtgtgtagctgtgatgatgag
ggtgatgtgatgtcctgcagtgctgaagcctacatgctcccagtcagcctgagcaggggg
gccctcatcgccatccttgcctgcatttttgttctcctggtgctggtgctgcttatctta
tccatgaggcgacacaggaaacagccctacatcattgatgatgaggagaacatacatgag
aacattgtccgctatgatgatgaaggaggcggggaggaggacacagaggcctttgacata
gcagccatgtggaatccacgggaggcacagacaggagcagtggcaaagacaagacaggac
atgctgcctgagattgaaagcttgtctcgatatgttcctcagacatgcaccatggacagc
aacgtccacagctatgtgctagccaagctctatgaagctgacatggatctgtgggcccct
ccttttgactccctccagacgtacatgtttgagggggatggctctgtggcggagtccttg
agctcattacagtcagtcacttcggactcagaccagagctatgatttcctgacagactgg
ggaccacgtttccgaaagctggcagaaatttatggattttgctggctcaccaaaccacag
aaatcaacccacacaaaagaaaacaagaaactgagatctcagtatttttgtgtgaaatga
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