Monodelphis domestica (gray short-tailed opossum): 100016341
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Entry
100016341 CDS
T01031
Symbol
CASC3
Name
(RefSeq) cancer susceptibility candidate 3
KO
K14323
protein CASC3
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03013
Nucleocytoplasmic transport
mdo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100016341 (CASC3)
03015 mRNA surveillance pathway
100016341 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100016341 (CASC3)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100016341 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
100016341
NCBI-ProteinID:
XP_007482331
Ensembl:
ENSMODG00000013044
LinkDB
All DBs
Position
2:complement(197406694..197419710)
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AA seq
719 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSAGSRGGGGGGGGPGGVSSSSLRGGRSGGLNSRRAE
GGGLRSPEESECESEDCIEGDAVLSDYESAEDSEGEEEYSEEESSKVELKSEANDAANSL
AKEEKGEEKPDPKGTVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEDRKNPAYIPRKG
LFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRS
AHNPDDIKPRRLRKSRFEALTEESNWAMTTQTSSRAPGLWGSSCPPRHFINRNAAGTGRM
PTSRNFSRSGSYKEGRTGFRSSESSGQHSVYSDESDRYENGYRSRRLDYAQTRDPSPEME
FSHGFGSPEKEEAISEPPTPDIAPPPPDRPVEKKSYSRARRSRNKAGDASKLAEELPPPV
EVPAPAPPPPVTTPPPPSPPSPPPPPPPPPSSSSSSSSSSSKTGNWEAPVDSSTGGLEQD
MTQLNLTEQNWSSGQQPQFLQPRELRGIPNHMHLGAGPPPQFNRMEEMSVQGNRAKRYSS
QRQRPVPEPPAPPVHISIMEGHYYDPMQFQGPIYTHSDSPTPMPPQGMIVQPEMHLPHPG
LHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGSPSYPYAPGALPP
PPPPHLYPNTQAQSQVYGGVTYYNPVQQQVQPKPSPPRRTSQPVTIKPPPPEVVSRGSS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgacgacggcagcgcgcctcgcaggacacggaggacgaggagtccggagcc
tcgggctcggatagcgccggctcccggggcgggggcggtggaggcggcgggcccggcgga
gtctcctcatcctcgctgcgtgggggccgatctgggggcctgaactcgcggcgggcggaa
ggcggcggactccggagccccgaagagtcggagtgtgaaagtgaagactgcatagaaggc
gatgctgttctctcagattatgaaagtgcagaggattcagaaggagaagaagaatacagt
gaagaagaaagctctaaagtagagctaaagtcagaagctaacgatgctgcaaattctttg
gcaaaagaagagaagggggaagaaaagcctgacccaaaaggcactgtgactggcgagaga
caaagtggagatgggcaagaaagcacagagcctgtagaaaacaaggtgggtaaaaaggta
ccaaagcatttggatgatgatgaagatcggaagaaccctgcctacatccccaggaaaggg
ctcttctttgagcatgacctccgaggccaaacccaagaagaagaagtcagacccaaagga
cgtcagcggaagctgtggaaggatgagggccggtgggagcatgacaagttccgagaagat
gaacaagcgcctaagtctcgacaagagctcatagccctctatggctatgatattcgatca
gctcacaacccagatgacatcaaaccccggagactccgtaaatccaggtttgaagctctc
acagaggagtcaaactgggcaatgacgacgcaaacaagctcccgtgcaccagggctctgg
ggatcctcttgcccaccaagacatttcatcaatcggaatgctgctggtacaggcagaatg
cctacatctaggaacttctctcgatctgggagctacaaggaaggaaggactgggtttagg
tcttcagaaagtagtgggcaacatagtgtttactctgatgaatctgacaggtatgaaaat
ggttatcgttctcggcgcctggactatgctcaaactagggacccatccccagagatggag
ttttcccatgggtttggcagccctgaaaaagaggaagccatttcagagcctccaacccct
gatattgcaccaccacccccagacagaccagttgagaagaagtcttactctcgagcaaga
agatctagaaacaaagctggagatgcaagcaagctggcagaggaattgccacctcctgtg
gaggtgccagctcctgcacctccaccccctgtaactaccccacccccaccatcaccacca
tcaccaccaccaccaccaccaccaccaccctcctcctcctcttcttcctcctcctcttcc
tccaagactgggaattgggaggccccagtggactccagcactggaggacttgaacaagac
atgactcaattgaatctgactgaacagaattggagctcagggcagcagcctcagtttctc
caaccaagggagcttcgaggtatccccaaccacatgcacctgggagcaggccctccacct
cagtttaaccgtatggaagaaatgagtgttcagggtaatcgagccaaacgatattcatcc
cagcgtcagagacctgtccctgaaccacctgccccacctgtgcacatcagtatcatggaa
gggcactactatgacccaatgcaattccaaggaccaatttacacccacagtgacagccct
accccgatgcctccccaaggcatgattgtacaaccagaaatgcacctcccccaccctggc
ttacatccccatcagacaccggcacctctgcctaacccgggtctgtaccccccgccagtg
tccatgtccccgggacagccaccaccccagcagctgcttgcccctacctacttctccgct
ccaggtgtcatgaacttcggcagtcccagctatccctatgccccaggggcactgccccct
cccccacctcctcacctgtaccccaatacccaggctcagtctcaggtgtatggaggagta
acctattataacccggtccagcaacaggtgcagccaaaaccttctccacccagacggaca
tcccagccggttaccatcaagccccctccacctgaggttgtaagcaggggctccagttaa
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integrated database retrieval system
