Monodelphis domestica (gray short-tailed opossum): 100016427
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Entry
100016427 CDS
T01031
Symbol
NUP98
Name
(RefSeq) nucleoporin 98
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03013
Nucleocytoplasmic transport
mdo05014
Amyotrophic lateral sclerosis
mdo05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100016427 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100016427 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100016427 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100016427 (NUP98)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100016427 (NUP98)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100016427 (NUP98)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100016427 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
100016427
NCBI-ProteinID:
XP_001370272
Ensembl:
ENSMODG00000008290
LinkDB
All DBs
Position
4:complement(348566189..348667401)
Genome browser
AA seq
1799 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSNNNTGGLFGNTQTKPG
GLFGSNSFSQPATSSTSTGFGFGTSTGTSNSLFGAASTGASLFSSQNNAFAQNKPTGFGN
FGTSTSSGGLFGTTNTTSNPFGGTSTSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGATTGLFGSSTATSSTTG
LFGNSTTNAGFAYGPNKTAFGTSTTGFGTNTGSLFGQPTQPTTSLFSKPFGPAATTQNAG
FSFGNTNTLGQPNTNTMGLFGGTQASSGSLFGTATNTSAATGFGTGTGLFGPTNTGFGAV
GSTLFGSNKPAAFGTTTTSAPSFGTTSSGLFGFGGNTSGNSIFGSKPAPGTLGTGLGAGF
GTALGAGQASLFGTNQPKIGAGTLGTGAFGTPGFSATTATLGFGAPQAPVALTDPNASAA
QQAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSNLFSPVSR
DADDLASPSDYPENGERFTFLNKAVDENHQQDGEDDSLVSRFYTNPIAKPIPQTPENAVN
KHHSSADDSIVVLNMRGALRNGLEGSSEEASFHDESLQDDREEEEESTYHIHPAGIILTR
VGYYTIPSMDDLAKITNEKGECIVTDFTIGRKGYGSIYFEGVVNLTNLNLDEIVHIRRKE
VIVYLDDDLKPPVGEGLNRRAEVTLDGVWPTDKTSRSLIKSPERLADINYEGRLEAVSRK
QGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEDEEEHPSKAEAKKLKTAPMPPVGQPVPL
QMALNGKPALPSQSQSPEVEQLGRVVELDSDMIDITQEPILDSIVEEIVPEEQEPVSAST
HIASSLGINPHVLQIMKASLLAEEDDADWVLEQRFGKLPSKGDTSQEICSPRLPISSAHP
PKSRTLVGGLLQSKFTSATFLSPSASAPDFRNPRASSLASVPSTSPWSVPPPLAPVFAVP
TPAPEIQLKTVGARRQPGLVPLEKSVAYGKGKLLMDMALFMGRSFRVGWGPNWTFVNSGD
QLSGCHESGDNHSTESMEYGFLPNPITVKSLTESPFKVHVEKLSLRQRKMDRDVQLYQTP
LDIKLKHSTVHVDELCPLVVPNPGVAVIHDYADWVKEISEDLAESETVVKHWGLTWTLCE
ALWGHLKELEDQLDEPSEYVHSLERRRAFSRWLSQTAADRIEEEVALSRQDNPVEAVFSY
LTGRRISEACRLAQQSGDHRLALLLSQLGGSQPIRDLLTMQLVDWHRLQADCFIQEDRLR
IFTLLAGKPVWRLSEQKNINVCSQLDWKRSIAIHFWYLLPPTASISQALSMYEEAFQNTC
ESEKYACSPLPSYLEDSGCVLEEDDTRRPLRDVSFHLLKLYSDRHYDLNQLLDPRSITSD
PLDYRLSWHLWEVLQALNYTHLSEQCEGVLHASYAAQLESEGLWEWAIFVLLHITNTCMR
EKAVRELLTRHCRLSETPESWAKESFLTQKLCVPAEWIHEAKAVRAHMEADQHLEALYLF
KAGHWNHCHKLVIRHLASDAIINENYNYLKGFLEDLAPPERSSLIQDWETAGLVYLDYIR
VIEMLSRIQQLDCPGYELERLHTKVTSLCNRIEQIHCSNAKDRLAQSDMAKRVANILRVV
LSLQQAPEAAPDSPADLQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVGSQ
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatcatttggaactccctttgggggtggcactggtggctttggtacgact
tcaacatttggacagaatactggttttggtaccacaagtggaggggcatttgggacatct
gcatttggttccaacaacaatactggaggcctctttggaaacacacagaccaagccagga
ggcttgtttggatcaaattcatttagccagccagctacctcttctacaagcactggtttt
ggatttggaacatctacagggacgtcaaatagcttgtttggggctgctagcacaggagca
agtctcttctcatcccagaacaatgcctttgcacaaaataagcctactggttttggaaat
tttggaacaagcactagcagtggaggtctttttggaactacaaatacaacttccaacccc
tttggtggtacatccacctctctttttggacctagtagttttacagcagctccaactgga
accaccataaaatttaatcctccaactggcaccgatactatggtcaaagctggagttagc
actaacattagtaccaaacaccaatgtattactgctatgaaagaatatgaaagcaaatca
ctggaggaacttcgattggaagattatcaggctaacaggaaaggtcctcagaaccaggtg
ggagctggtgccaccacagggctgtttggctcttctacagccacttccagcaccacaggc
ctttttggaaactccaccacaaatgcaggttttgcatatggacccaataaaactgctttt
ggaacaagtacaactggatttgggactaatacaggtagtctctttggtcagccaactcag
ccaaccactagtctcttcagtaagccatttggtccagctgcaacgacccagaatgctggc
ttttcctttgggaataccaacacccttggacagccaaacaccaacacaatgggtttattt
ggaggaactcaggcctcatctggaagtctttttgggacagctacaaacacaagtgctgct
actggatttggaaccggaacaggcctctttgggccaactaacacaggatttggtgctgtt
ggttcgaccctgtttggcagtaacaagcctgctgcatttggaactactacaaccagtgct
ccttcgtttggtacaaccagtagcgggctctttggttttggtggaaacactagtgggaat
agtatttttggaagtaaaccagctcctggtactctgggaacaggacttggagcaggcttt
ggaacagctcttggtgctgggcaggcatctttatttggaaccaaccagcccaagataggg
gcagggactttgggcacaggagcttttggaacccctggatttagtgctactacagccacc
ttgggttttggtgctcctcaggctcctgtagctttgacagatccaaatgcttctgctgcc
cagcaagccgttctccagcagcatatcaatagtctaacatactcaccatttggagactct
cctctctttcggaaccccatgtcagaccccaagaagaaagaagagagattgaaacccaca
aaccctgctgcacagaaggctctgaccacccctactcactataaattgacgcctcgccct
gccactagagtccgacctaaggctctgcagacaacagggacagccaaatcccacctcttt
gatgggctagatgatgatgagccctctctagccaatggagcattcatgcccaagaagagt
attaagaagttggttttaaagaatctcaacaacagcaacctcttttctcctgttagtcgg
gatgctgacgacttggcctcgccatcagattatccagagaatggggagagatttactttt
cttaacaaagctgttgatgagaaccatcagcaggatggggaagatgactctcttgtgtca
cgattctataccaaccccattgccaaacccatcccacaaactcctgagaatgcagtaaac
aaacaccacagcagtgccgatgactccattgtcgtgttgaacatgcgtggtgccttacga
aatggcctggaaggaagcagtgaagaagcctctttccatgatgagtctttgcaggatgat
cgggaagaagaagaggaaagtacttaccatatccatccagcaggcatcattctcaccaga
gttggctactatacgataccttctatggatgacctagccaaaattaccaatgaaaaggga
gagtgtattgtaacagatttcaccataggtcgaaaaggttatggctcaatttatttcgag
ggagtggtcaatttaactaacctcaacctggatgaaattgtacatattcgtaggaaagaa
gtcattgtctacctggatgatgacctgaagcctcctgtgggagaagggctaaatagacgg
gcagaagttaccttggatggagtttggccaactgacaaaacttctcgtagcttaataaaa
agtcctgaacgactagctgatatcaactatgaaggcaggttagaagctgtttcacgcaaa
caaggtgcccaattcaaggagtatcgaccagagactggttcttgggtatttaaggtctcc
cacttctcaaagtatggcctacaggattctgatgaggatgaggaggagcatccatctaaa
gcggaagcaaagaagttgaaaacggctcccatgcctcctgtaggccagccagtaccactt
caaatggctctcaatggcaaacctgctcttccatcccagagccaaagtccagaggtggaa
cagctagggagggttgtggagctggacagcgatatgatagatatcacccaggagccaatt
ttggattccatagtagaggagatcgtccctgaagagcaggaacctgtatctgcttcgaca
cacattgcatcttcattgggtattaacccacatgtcttacagatcatgaaagcatctttg
cttgctgaagaagatgatgcagattgggtcctcgaacagcgctttggcaaacttccttcc
aaaggagacacttctcaagaaatatgctctcccagacttcccatttcctcagcacaccca
ccaaaatctcgaacattagttggtggtttactacagtcaaagtttacaagtgcaactttt
ctctcgccaagtgcctctgcgccagattttcgaaatcctagagcttcatctttagcaagt
gtcccttctacatctccttggtcagtccctccaccactggcccctgtgtttgcagtgcct
accccagcacctgaaatacagttaaaaactgtgggtgctcgaagacaacctggtcttgtt
cccctggaaaaatctgtcgcctatggtaaagggaaactcttgatggatatggcactcttc
atgggacgttcattccgggttggctggggtcccaactggacctttgttaatagtggtgat
caactgagtggatgccatgaatctggagataatcatagcactgaatctatggaatatgga
ttcctgcctaacccaataactgtcaaatctctgaccgagtccccattcaaagtccatgtt
gaaaaactgagtttgagacaaaggaagatggatagagatgtacaattataccagactccc
ttggatatcaagcttaagcacagcactgttcatgtagatgaactgtgtcctcttgtggtc
cctaatcctggagtagctgtcattcatgactacgcagactgggtgaaagagatatcagaa
gacttagcagaatcagaaactgtagtaaagcactggggcctgacatggacattatgtgaa
gccctctggggtcacttgaaggaactagaagatcagctggatgagcccagtgagtatgta
cacagtctggaacgccgcagagctttctcccgttggctgtcacagacagcagctgatcgc
attgaggaggaagtagccctgtcccgacaagacaatcctgtggaggctgttttcagctac
ctcacaggcaggaggatcagtgaggcttgtcgtttggcccaacagtcaggtgatcaccga
cttgccctacttctgtcccagctgggaggaagccagccaatccgggacctgctcaccatg
cagctggtagactggcatcggctccaggcagactgcttcatccaggaggatcgactacgc
atttttactctcttggctggaaaaccagtatggcgactctcagaacagaagaatatcaat
gtctgttcccaactggattggaaacgctcaattgctattcatttctggtaccttcttcct
cctactgcttccatttcccaggctctcagcatgtatgaggaagcattccagaacacctgt
gaaagtgagaagtatgcctgcagtcctctgccttcataccttgaagactctggctgtgtg
ttagaagaagatgacacaaggagacctctcagagatgtgtcttttcaccttctcaagctc
tacagtgacagacattatgatctgaatcagctattggatcctcggagtataacttctgat
ccattggactatcgattgagctggcacctctgggaagtcttgcaggccttgaattatacc
cacctttctgagcaatgtgaaggcgtgctacatgccagctatgccgctcagcttgagagt
gaaggactatgggagtgggccatctttgtcctacttcatatcaccaacacatgtatgcgt
gagaaggcagtaagggagctactcacccggcactgtaggctttcagagacccctgaatcc
tgggccaaggagtccttcctgacccaaaagctgtgtgtgcctgctgagtggatccatgag
gccaaggctgtgcgtgctcacatggaagctgaccagcacctggaggcactctacctattc
aaagctggacactggaaccactgccacaaactggtcatcagacatctggcctctgatgct
attattaatgagaactacaactacctgaagggattcctggaagacctagccccaccagag
cgtagcagcctaattcaggactgggagacagctggactagtttatctggattatatccga
gtcatcgaaatgctcagccgaattcagcagcttgattgtccaggatacgaactagagaga
ttacataccaaagtgacctcgctttgtaatcggatagagcagattcactgctccaatgcc
aaggatcgactggcccagtcagacatggccaagcgtgtcgccaatatccttcgggttgtt
ttgagtctccagcaggccccagaagcagccccagactcccctgcagacctgcagcgtgtc
cctctgcgcttactggctccccacattggccggctccccatgcctgaggactatgcctta
gaagaactgcgtagtcttacacagtcctacctccgagaactgaccgtggggagccagtga
DBGET
integrated database retrieval system
