Monodelphis domestica (gray short-tailed opossum): 100016486
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Entry
100016486 CDS
T01031
Symbol
EXOSC1
Name
(RefSeq) exosome component 1
KO
K07573
exosome complex component CSL4
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100016486 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100016486 (EXOSC1)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100016486 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
100016486 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
100016486
NCBI-ProteinID:
XP_001366739
Ensembl:
ENSMODG00000004213
UniProt:
F6XQF9
LinkDB
All DBs
Position
1:73730967..73737038
Genome browser
AA seq
195 aa
AA seq
DB search
MAPPLKYCVPGERLCNVEEASPGSGTYTRHGYIFSSLSGCLVKTSDNGELPVVSVTRETE
SQLLPDVGTIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPRTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgttgaagtactgtgtcccaggcgagcgactgtgtaacgtggaggaagcc
agccccggcagcggcacctacacccggcacggctacatcttctcctcgctctctggctgt
ctggtgaagacgagcgacaacggcgagcttccagtggtgtcagtgacgagagagaccgag
tcccagctgcttccagatgtgggaacgatcgtaacctgtaaggtctccagcattaattct
cgatttgccaaagttcatatcttatatgtgggatccactccactcaagaactcctttaga
ggaactatcaggaaggaagatgttcgtgctactgaaaaagacaaggttgaaatatataag
agtttccgcccaggtgacattgtgctggctaaggtgatttccctcggtgatgcacaatcc
aactacctactgacaactgcagaaaatgagctgggagtagtggtggcccacagtgaatca
ggtgtccagatggtgccaatcagctggtgtgagatgcagtgccctaggacgcacactaaa
gaattccgcaaggttgcccgagtacagccagagttcctgcagacgtag
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integrated database retrieval system
