Monodelphis domestica (gray short-tailed opossum): 100016491
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Entry
100016491 CDS
T01031
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100016491 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdo03036
]
100016491 (SMARCAD1)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100016491 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
LA-virus_coat
Motif
Other DBs
NCBI-GeneID:
100016491
NCBI-ProteinID:
XP_007495787
Ensembl:
ENSMODG00000019268
UniProt:
A0A5F8HA60
LinkDB
All DBs
Position
5:complement(28788427..28887788)
Genome browser
AA seq
1051 aa
AA seq
DB search
MSHFNLDRFRFEKRNKIQEQPEPAPQPPPPTPPPPPQVELPSPVSIIEDDDLERGKGSRP
GTPDSDITEKTEDSSVPETPEPERKSGVSYFRNQKGIQFIDLSSDSEDFASPNCSNINQE
EKSEREPVIIVSEQSEDEQTEEYSNMTQRNDDISELEDLKDAKLQTLKELFPQGSDSDLL
KLIESTSTMDGAIAAALLMFGEGIPRKRKLDSSSSYTSEDEDDENNQTVKRKRFHPLEEP
KDFEESEDKWDKQEAIVAKLQTEFPSLAKEELREVLKEHEWMYNEALESLRVFAEDQQGK
KSLPYTIMKHTDFTTTNKVTMDVQYPSKSEVSNGKAVSRKSQNHLKNTPKTKLKQKCSVK
AQNGFNKKGKKTFFTSKKEMPDSEFDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQG
ASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMCKTNGLSEDLIWHCKTLIQERDVV
IRLMNKCEDISNKLTKQVTRLTEGGGGWNIDQPSILNQSLSLKPYQKIGLNWLALLHKHG
LNGILADEMGLGKTIQAISFLAYLYQEGNRGPHLIVVPASTLDNWIRDVNLWCSNLDVLF
YYGSQEDRKQLRYDIHNKVVDFNVIVTTYNCAISSSDDRNLFRRLKLNYAIFDEGHMLKN
MGSVRYQHLMTINAKNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKAK
SAEEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDCVELCAMSEKQEQLYFGLF
NKMKKSINGMEKSSEMGNVMMQLRKMANHPLLHRQYYTAEKLKIMSQLMLKEPTHCEANP
DLIFEDMEVMTDFELHLLCKQYAHINDFMLDMDLILDSGKFKKLECILSELKEKGDRVVL
FSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDQFNTDMDIFIFLLSTKAGGLG
INLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVHVIKLISQGTIEESMLKINQQKL
KLEQDMTTTDEGDEGNVPADIATLLKTSLGL
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgagccacttcaacctggaccggttccgctttgagaagaggaataaaattcaggaacag
cccgagccagccccccagcctcctcctcctactccacctcctcctcctcaagttgaactt
ccttcacctgtttccattattgaagatgatgatcttgaaaggggaaaaggtagcaggcca
ggaacaccagattcagatataacagaaaaaacagaagattccagtgtaccagaaactcca
gagcctgaaagaaagtcaggggtatcatatttcaggaatcaaaaaggaatacagtttatc
gatttatcttcggacagtgaagattttgcctccccaaattgttctaatataaatcaagag
gaaaagtctgaaagagaacctgtgattatagtttctgagcaatctgaagatgaacagact
gaagagtattctaatatgacacaaaggaatgatgatatctcagaattggaagaccttaaa
gatgcaaagcttcagactttgaaggaactctttccacaaggaagtgacagtgatttactt
aagttgattgaatcaacaagtacaatggatggggcaatagctgctgcattgctgatgttt
ggtgaaggtatacctcggaaaagaaaattagattcatcttcctcatacacctctgaagat
gaggatgatgagaataatcaaactgtaaaaaggaaacggttccatcctcttgaagagccc
aaggattttgaagaatcggaagataaatgggacaagcaggaagcaattgtagcaaagctg
cagactgagtttcccagtttggctaaagaggaactgagagaagtacttaaggaacatgaa
tggatgtataatgaagctttggaatctctaagagtatttgctgaagatcaacaaggtaaa
aaatctctgccgtataccatcatgaagcatacagatttcacaactacaaataaggttaca
atggatgtacagtatccttcaaaaagtgaagtttctaatggaaaagcagtctcaagaaag
agtcagaatcaccttaaaaatactcctaaaacaaagctgaaacaaaaatgttctgttaaa
gcacagaatggttttaacaagaaaggcaaaaaaacttttttcacttctaaaaaggaaatg
ccagactctgagtttgattcaggctctgatgtcgggagctctttggatgaggactacagc
agtggtgaagaagtgatggaggatggctacaaaggtaaaatacttcacttcctgcaaggg
gcttcaattggtgagctcactttgattccccagtgttctcagaaaaaggctcagaagata
acagagctccggccctttaacagttgggaagctctgttcacaaaaatgtgcaagacaaat
ggcttgtcagaagatttaatatggcactgtaaaacattgatccaagaaagggatgtagtt
ataagacttatgaacaaatgcgaagacatttcaaataaattaacaaagcaggtgaccagg
cttactgaaggtggaggtggatggaacatagatcaaccttccattctaaaccaaagtttg
tctctcaagccatatcagaagattggtttaaattggctagcactactgcataaacatgga
ctaaatggtattttggctgatgaaatgggtttagggaaaacaattcaagctatttccttc
ctggcatatctctaccaagaaggtaatagaggtcctcatttaattgttgtgccagcttca
actttagacaattggataagagatgttaatttatggtgctctaatctagatgtcctcttt
tattatggttctcaagaagatcgcaaacagcttagatatgatattcataataaagttgta
gacttcaatgtgattgtgactacgtataattgtgcaattagcagttctgatgaccgcaat
ctatttcgacggctgaaacttaactatgcaatcttcgacgagggccacatgttgaagaat
atgggctctgtacgctaccagcacctcatgaccattaacgcaaagaatcgtctgcttcta
acaggcactcctgttcagaataatctattggaactcatgtctctcttaaatttcgtcatg
cctcatatgttcagtagcagcaccagtgagatcagaagaatgttctcttccaaagcaaag
tcagctgaagaacaaagtatatatgaaaaggagagaatagcacatgctaagcaaattata
aagccatttattctgagaagagtaaaagaagaggtccttaagcagctacctcccaaaaaa
gattgtgtcgagctgtgtgcaatgtcagaaaaacaagaacaactgtactttggccttttt
aacaaaatgaagaaatccatcaatggcatggagaaaagctcagaaatgggcaatgtgatg
atgcaactaagaaaaatggccaatcaccctttattacatcgtcaatactacacagctgaa
aaactcaaaataatgtcacagcttatgctaaaggaacctacacattgtgaagctaatcct
gacttgatttttgaagatatggaagtcatgacagactttgaactacatttactttgcaaa
cagtatgcacatatcaatgactttatgttagacatggatctcattttggactctggaaaa
ttcaagaaactagaatgcattttgtctgaattaaaagaaaagggtgacagggttgtatta
tttagccagtttaccatgatgctggacatcttagaggttcttttaaaacaccatcagcat
agataccttagattggatggaaagactcagatttctgaaaggattcacctaattgaccag
ttcaatacagacatggatatctttatatttctgctttcaacaaaagctggtggacttggg
ataaatctgacttctgcaaatgttgtcatacttcacgatattgactgtaatccttacaat
gacaagcaagctgaagatcgatgccacagagtaggtcagactaaagaagtacacgtcata
aagttaataagtcaagggacaatagaagaatctatgctcaaaatcaaccaacagaaactg
aaactagaacaagatatgaccacaacagatgaaggtgatgaaggaaatgtacctgcagat
atagctacattgctaaagacatcattaggtctctaa
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integrated database retrieval system
