Monodelphis domestica (gray short-tailed opossum): 100016662
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Entry
100016662 CDS
T01031
Symbol
PKD2
Name
(RefSeq) polycystin 2, transient receptor potential cation channel
KO
K04986
polycystin 2
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mdo03037
]
100016662 (PKD2)
04040 Ion channels [BR:
mdo04040
]
100016662 (PKD2)
Cilium and associated proteins [BR:
mdo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100016662 (PKD2)
Ion channels [BR:
mdo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100016662 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
100016662
NCBI-ProteinID:
XP_001370448
Ensembl:
ENSMODG00000020725
UniProt:
F7ANU1
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All DBs
Position
5:complement(53422790..53491417)
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AA seq
997 aa
AA seq
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MVNPSRVKPQLEAGAPRRAQPPRPGEPAAARARLSVPAASADGCGGLAAPGLPSPGGLRE
QRGLEIEMERIRQAAARDPPAGASASPSPPLSACSRQAWSRDNPGFEPEDEDEEDDDEEV
EGEEGGMVVEMDVECRPGSRRSAASSAVTSSCASGLGLGSFHGANIPSGRRRRRETQGAL
GCSSPAGPGEALHRHLPLDGPHQPQPPPPPLPPPRVPGAKRLLRALRGLWGTRLMEESST
SREKYLKSVLRELVTYFLFLVVLCILTYGMVSSSMYYYTRVMSQLFLETPVSKMEKTNFK
TLSTMEDFWKFTEGSLLDGLYWEMWYSNRTGAENRSFIYYENLLLGVPRIRQLKVRNGSC
SIPPDLREEIKECYDVYSISNEERAPFGLRHGTAWTYTNEKDLNGSSHWGLIATYSGAGY
YLDLSRTREETAVQIANLKKNIWLDRGTRATFIDFSVYNANINLFCVVRLLVEFPATGGV
ITSWQFQPVKLIHYISTFDFFLATCEITFCFFILYYIVEEILEIRIHKLHYFRSFWNCLD
IVIIALSIVAIGINIYRKSNVELLLKYLEDQNTFPNLEPLAYWQIQFNNVAAVMVFFVWI
KLFKFINFNRTMSQLSTTMSRCAKDLVGFAIMFLIIFLAYAQLAYLVFGTQVDDFSTFQE
CIFTQFRIILGDFNFTELEEANRVLGPIYFTTFVFFMLFILLNMFLAIINDTYSEVKSDM
AQQKTEMELSDLIRKGCQKAMIKLKLKKNTVDDISESLQQSGGKLNFDELRQDLKGKGHT
DAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKEREDLDLDHSSLPRPMSIRSFPRNLDD
SEEDDDEDSGHSSRRRGSSSSGVSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIME
RAKLKRREVLGRLLDGVTEDERLGRDNEIHREQMERLVREELERWESDDGASQISQRLGT
PVGLNGQPRPRGSRPSSSQSTEGIENGGGNGGASIHG
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggttaatcctagccgtgtaaagccccagctcgaggcaggggctccccgccgagctcag
ccgccacgcccgggcgagcccgctgccgcccgggccaggctctctgttcccgcggccagc
gcagatggctgcggcggcctcgcggctccgggcctcccctcccccgggggcctccgggaa
cagcgcgggctggagatcgagatggagcgaatccgacaggcggcggctcgtgacccccca
gcaggggcctcggcctcgccttctcctcctctctcggcttgttcgaggcaggcatggagc
agagataacccgggcttcgagcctgaggacgaggacgaagaggacgacgatgaagaggtg
gaaggcgaggaaggagggatggtggtggagatggacgtggagtgccgaccgggcagtcgc
aggtccgccgcctcctccgccgtgacctcttcgtgcgccagcggcctggggctcggcagt
ttccacggcgccaacatcccgagcggccgccggaggaggagagagacccagggcgccctt
ggctgctccagtcctgccggtcccggagaggcgctgcaccgccacctccccctggacggg
cctcaccaaccgcagccaccgccgccgcccctgccaccgccccgagtgcccggggccaaa
agactgctgcgggcacttcgaggtctctggggaacaagactgatggaagaaagcagtaca
agtcgagaaaaatatttaaaaagtgttttgcgagaattggttacatacttcctttttctt
gtggttttatgtatcttaacgtatgggatggtgagttccagcatgtattactacactagg
gtaatgtcgcagctttttttagaaacgcctgtgtctaaaatggagaagacaaattttaaa
acactttccaccatggaagacttctggaagttcactgagggatctctgctggatggcctc
tattgggaaatgtggtacagcaacagaacgggagctgaaaaccgtagtttcatttactat
gagaacctgctattgggtgtgcctcgaatccgtcaattaaaagtcagaaatgggtcttgc
tctatccctccagacttgagggaggagattaaagaatgctatgatgtttattccatcagt
aatgaagagagagctccatttggtcttcgacatggaacagcttggacatacacgaatgaa
aaagacttgaatggcagtagtcactggggattgattgccacatacagtggggctggctat
tatctggacctatctagaaccagagaggaaactgcagtgcagattgcaaatctcaagaaa
aacatctggttagacagagggactagagcaacgtttattgacttctcagtatacaatgcc
aacattaatctcttttgtgtggtcagattattggttgagttcccagcaactggtggtgta
attacatcttggcagtttcagcctgtgaagctgattcactacatctcaacatttgatttc
ttcctggcaacttgtgagatcaccttttgtttctttatcctttactacatagtggaagag
attttggaaattcgtattcacaaattgcattattttagaagtttctggaactgtctggat
atcgtgatcattgcgctgtcaatagtagctataggaattaacatctacaggaaatccaat
gtagaattgctgctgaaatatcttgaagatcagaatactttccccaacttggagcctcta
gcatattggcaaatacagttcaacaatgtggcagcagtgatggtcttctttgtctggatt
aagctttttaaattcatcaacttcaacagaaccatgagccagctatccactaccatgtct
cgctgtgccaaggaccttgttggctttgcaattatgtttctgattatttttcttgcatat
gctcagttggcttaccttgtctttggcactcaggttgatgacttcagcacattccaggaa
tgtattttcactcaattccgcatcattttgggagattttaacttcactgaacttgaggaa
gccaaccgagttttgggacccatttatttcactacttttgtgttctttatgctcttcatt
cttttgaatatgtttttggccatcatcaatgacacatactctgaagttaaatctgatatg
gctcagcagaagactgaaatggaactatcagatctcatcagaaagggctgtcaaaaagcc
atgatcaaactgaaacttaaaaaaaacactgtggatgacatctcagagagtctgcagcaa
agtggaggcaagttaaacttcgatgaacttcgccaagatctaaaagggaagggtcacaca
gatgcagagatcgaggcaatattcacaaaatacgatcaggatggtgaccaggaattgact
gagcatgaacaccagcagatgagagatgatttagaaaaagagagagaggatctggacctg
gatcacagctctttgcctcgacccatgagcattcgaagtttccctcggaacctagatgat
tctgaagaggatgatgatgaggacagtgggcatagctctcgaaggaggggcagcagctct
agtggagtttcttatgaagaatttcaagtactggttagacgagtggacaggatggaacac
tccatcggcagcattgtctccaaaattgatgctgtcattgtgaaactggaaatcatggag
agagccaagctgaaaaggcgggaagtattgggaaggctcctagatggagtgacagaggat
gaaagacttggtcgtgataatgaaatccacagggagcagatggagcgactggtgcgggaa
gaattagaacgctgggaatctgatgatggagcttcccaaataagtcagcgcttaggcact
cctgtgggactaaatggccagcctcgtcctaggggctcccgtccttcatcctctcagtct
acagaaggcatcgaaaatggagggggaaatggaggtgctagtatccatggatag
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integrated database retrieval system
