Monodelphis domestica (gray short-tailed opossum): 100016954
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Entry
100016954 CDS
T01031
Symbol
HCN3
Name
(RefSeq) hyperpolarization activated cyclic nucleotide gated potassium channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100016954 (HCN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdo04040
]
100016954 (HCN3)
Ion channels [BR:
mdo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
100016954 (HCN3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
100016954
NCBI-ProteinID:
XP_016285892
Ensembl:
ENSMODG00000017060
UniProt:
F6XHS5
LinkDB
All DBs
Position
2:189963732..189974175
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AA seq
788 aa
AA seq
DB search
MDTKQRPAAAAAGAGDEGTPGLETASPPAPSPATAAPGPSPAPGPESGPGPMRRQLGALL
QPAVNKFSLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPV
GITFFKEENSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPQAIRTRYLRTWF
LVDLISSIPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQ
WEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSINHMVNHS
WGRQYSHALFKAMSHMLCIGYGQQAPQGMPDVWLTMLSMIVGATCYAMFIGHATALIQSL
DSSRRQYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREE
IINFTCRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLL
SVLTRGARDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMR
RAFETVAMDRLHRIGKKNSLLQRKRSEPSPGSGGSGVMEQHLVQHDRDMARGVRGLAPGT
GARLSGKPVLWEPLVHAPLQAAAVTSNVAIALTHHRAPLPLSPDSPAALLARSARRSAGS
PASPLVPARGLPLLARGPWASTSRLPAPAARTLHASLSRAGRSQVSLLGPPPGGGGRRLG
PRGRPLSASQPSLPHRAAGEGSPGRKGSGGERLPASGLLTRLPGTAQPLRPPASDPGTSR
GPQLPANM
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacagcggcccgcggcagcagctgcgggtgcgggagacgagggcacccca
ggactggagacggcctccccacccgcccccagcccggctaccgccgccccaggaccctcg
cctgctccgggacccgaatcgggacccgggccgatgcggcggcagctcggggccctgctc
cagcccgccgtcaacaagttctctctccgggtgttcggcagccacaaggcagtggagatt
gagcaggagcgggtcaagtcagctggagcctggatcatccatccctatagtgacttccga
ttttactgggacctgatcatgctgttgctaatggtagggaatctcattgtcctccccgtg
ggcatcacctttttcaaggaggaaaactccccaccctggattgtcttcaatgtcctctct
gacacctttttcctgctggacctggtgctgaacttcaggacagggatcgtggtggaagaa
ggagcagagatactcctggctccccaagccatccgcactcgctacctccgcacctggttt
ctggtggatcttatctcctccatcccagtggactacatcttcctggtggtggagttggag
ccaagactggatgctgaggtttacaagacagccagggcccttcgaattgtccgtttcacc
aagatcctcagcctgcttcgattgctccgcctctcccgcctcatcagatacatccaccag
tgggaggagatctttcacatgacctatgacctggccagtgctgtggttcggatcttcaat
ctcattgggatgatgctgttgttgtgtcattgggatggctgcctacagttcctggtccca
atgctccaggactttcctcctgactgctgggtttccatcaaccacatggtgaatcactcg
tggggccgccaatattctcatgccctcttcaaagccatgagtcacatgctgtgtataggc
tatggacaacaagcacctcagggcatgccggatgtttggctcaccatgcttagcatgatt
gtaggtgctacatgctatgccatgttcattggtcatgccactgccctcatccagtctctt
gactcatcccgtcgccagtaccaagagaagtataagcaggtggagcagtacatgtccttc
cacaaactaccagctgatacccgtcaacgcatccatgagtactatgaacatcgctaccag
ggcaaaatgtttgatgaggaaagcatcctgggggaattgagcgagccacttcgtgaggag
atcattaacttcacctgtaggggcctggtggcccacatgcccctgtttgctcatgctgac
cccagcttcgtcactgctgtgctcaccaaacttcgatttgaggtctttcaaccgggtgac
cttgtggttcgtgaaggctctgtgggcagaaagatgtactttattcaacatggattgctc
agtgtgctgacccgtggtgctcgggacacacgtctcactgatggttcttactttggggaa
atctgcctactgactaggggtaggcgaacagctagcgtgagggctgacacctactgtcgc
ctctactcactcagtgtggaccactttaatgcggtgctagaggaattccccatgatgcgg
agagcctttgagacagttgccatggacaggttgcaccgaattggaaagaaaaattccctg
cttcagcgcaagcgttcagaacccagcccaggaagtggtggcagtggggtcatggagcag
catctggtacagcatgaccgagacatggctcggggagtgagggggctggccccgggcaca
ggtgctcgtctgagtgggaagccagtgctctgggagcccctggtccatgccccactgcaa
gcagctgcagtcacctctaacgtggccattgctcttacccaccatcgggcaccgctgccc
ctctctccagactctcctgccgctcttcttgctcgttcagctcgtcgctcagctggctca
ccagcctcaccgctggtgcctgctcgtggactgcctttgttggctcgagggccttgggca
tccacctcccgcctgcctgcaccagcagcccgaactcttcatgccagcttatcccgggca
ggccggtcacaagtttccctgttaggtcctccacctgggggtggtggacggcggctaggg
cccaggggacggccactttcagcatcacaaccatcacttcctcatcgagcagctggagag
ggctcccctgggcgcaagggttcaggaggtgagcgcttgcccgcctcggggctcttaacc
aggcttccaggcactgcccaacccctcaggcctcctgcctctgatccaggtactagtagg
ggccctcaacttcctgctaatatgtga
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