| Entry |
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| Symbol |
SETX
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| Name |
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| KO |
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| Organism |
mdo Monodelphis domestica (gray short-tailed opossum)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mdo00001]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100017004 (SETX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mdo03021]
100017004 (SETX)
Enzymes [BR:mdo01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100017004 (SETX)
5.6.2.5 RNA 5'-3' helicase
100017004 (SETX)
Transcription machinery [BR:mdo03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100017004 (SETX)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(459237880..459326114)
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| AA seq |
2783 aa
MSTCRWCTPGGESTVDFLKSYAFGTLPCEILTANEDLCYCLECVAEYHKARDKLPSLHEI
LWDFETSRLINHFEKSMKGEIEEDDELFIVDDNGETQLFGFTGQDFENKLRVPLLEILKY
PYLLLHEHVNELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNEMVRRWAILTARNLGK
VDRDDYYDLQEVLTCLFRVIELGLLESPDIYTSSEFEKGKLVLLPSHMYDTNNYKNYWLG
ICMLLTILEEQAMDSLLLGSEKQNDFMQSILHTMEKQSDEDSVDPFWPALHCFMVILDRL
GSKVWGQLIDPIEAFQTIINNVSYNKEIQNIRNSSTRTKLEPESDLEEMVTCSQIVYNYN
PEKTKKDSGWRSAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMD
LKDLGVAYIVEVIHHLYSEVKDVLNQKVAVCDTVTEFFLLILVSVIELHRNKNCLHLLWV
SSQQWVEAVVKCAKLPTTAFARSAEKTAGSYSKGTNVISSLPLHQIPSNSVQLACVQLIR
SLLREGCQLGQQTLCKQFLDKLNLCLRGNLSLGWHLNSQETLELQTCLKQIIKNKKVKGL
PCSTFVDRTVACKTPPAIYIKEENDVPVERSKRDTSSQDSSSPSFSKEPLRADVYRTQES
PSLRRSYSWEEENRQTYLKESKLDDLFSNKSCLKQEKAPDAKSSHNHEILDNAEKEKDTS
ENNSPNTHLDLASRNNSMEGGYDRTTNIQTCLTVTDSRSDSPQNVSSSSDDSRSKNDSGF
KNSKFRTKAQKDELCAKLLQVMKEHKKTTMVSSVNNLESKQSSSILGSHNPCKDVEIQKG
FALIQNAQSEPCTTSEDTINEEESRNDNSLLIRKKSDARQLDPLTFHKNNYLSQESDSDD
DDDDDDTDNDDDTDDDDDDTDDDMVSLKTIRNTLLKKKCQLINQPDRHESKDSNYEEDNG
TDHVPCNLAREEVPPQNFKFSTLTDSQVDKDLDRLPFIAHISVLNFPSDSTPGSSYQLQK
KDKDVLRYSPVSQSNEPTSVVESTRNQVIIISDSDDDERSPNLQKQMKKDKIDIKREFPE
EYPSTSNTILENKLEKEEKTKSPLLVEESDSQFFEFETPHEVFSVWQDSETESKHSLQES
EPEQDSFLTSTGESGLDDQTNDWGYDTDYISDEVIQKVAKTLEEHLDSQCHVFPNEKFQT
ESKTKKQPYNAPMAEDLSSCLRNAEKPIICISGDLTEEHIENVDEEKKESTSTLSASPNL
NFEISSEESSKQNSPQSLSSPKLTKKMPLSKNSKKININPPRRQNKKNNQTSPKKILCRT
MPAVIPPKKFRQCPEPTSTAEKLGLKKGPRKAFDLSQRSLDFVVKLRDHGKTAGEVDTQQ
KKKTTKLITPQTLVVKNNKKMLACQDLQFLRQIRPKSHKNQQALSATHSKESSPKTVTKP
AQNSEAIIQASSGPSDNFKEKNKQASGTDTKQSRKSSFSGTETVKAKSLTQVPNDSPHST
KPGCTELNVRVETTEASISTSKNHSSNSSSVGGDLTGVVQPLPCLHSEGISFREDESDVN
SDTEENNLFLTQHDPVDMELSSQVESFNDFEVSIGKDTVEMEEGPKNFTADRALSNIKCK
HKDCTNTVENQGEYCSLHSEAKVSDDHVFVKPALPLSLSNKAIKSTTKIFSSSSNSRNAH
LSRAIENSLKLLPASKNQTNLTATTTPKLMQPVFPLVQKPILKDEGKNLSNILQPQNMQT
SPNYFKRPAPLSLLETKRTFQASSATNFPIRQSIFDSFIKEILKWKYEMFVNFDQFGPPA
NLCQAILKPVPVTFQNSEDYLNVFFPLLILNTFETVAQEWIDNPKKGNTYELHLRSFSAG
DINCGQFVVCLQECDMAKQLHPKENDLVFLIPKKLNGKKKVIEESEMKDQQVYHCGYVSQ
FRRSSVRLHGVMERALDLESEDLGHNAQFEGCLSIQTQSNLSFHINESIDCIVISSLVTT
QRKLKALSLLGRNTVVPLARAILNPSTSDFCPRDSLNTAPERILTYLKDYNEDQKKAIEV
AYAMVKQPPLIAKICLIHGPPGTGKSKTIVGLLYRILTEKPKRGDSDENLNAKIKRNRVL
VCAPSNAAVDELMKKIILEFKEKCQDKKNPLGNCGDINLVRLGPEKSINNEVLKFSLDSQ
VNHRMKKDLPSHIQEMHERKEHLDVKLDKLSRQRALDRCEKGQKRSNLDEEIARISKERQ
QLASKLKEVRGRPQETQSSIILESHIICCTLSTSGGLLLESAFRRQGCVPFSCVIVDEAG
QSCEIETLTPFIHRCNKLILVGDPKQLPPTVISVKAQEYGYDQSMMARLYKHLEEQVKQN
VISRSPVLQLTVQYRMHPDICLFPSSYIYNRTLKTNRLTEESRCTSDWPFQPYLVFDVGD
GSERRENDSYVNVQEIKLVMELIKLIKDRRKDITMRNIGIITHYKAQKMMIQQELDKEFE
RNRPGEVDTVDAFQGRQKDCVIVTCVRANASQGSIGFLASLQRLNVTITRAKYSLFILGH
LRTLMENQHWNHLIQDAQKRGAIIRTFDKNYKYDAMKILKLKSMPQRSLSHPSMVVPEIT
RSQNSLPSIKPKEVMNKLDSVISKTAAVASPRRSSTSLLHADIQPFDCREATVVTKATEV
PIVRDPRLAKRNDRDAAEKFLGETQPFSIQHPRVSAPICEPGLPLTHQDPSSILQHLFSK
VAASNNCNLTVQLEAPSASTSVPTNKRKTSEEEGSGYGREVTSSREGQEKSGYRKDYHPD
RDYCLDRRRKENQDSHSKRRKLS |
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| NT seq |
8352 nt +upstreamnt +downstreamnt
atgagcacatgtcgctggtgtacaccaggtggtgaatccactgttgacttcctaaagagc
tatgcttttgggactcttccctgtgaaattctcacagctaatgaggacctctgttactgc
ttggagtgtgtggctgaataccacaaagcaagagataaactaccttctttgcatgagatt
ttatgggattttgaaacctctcgtctcataaatcattttgaaaaatccatgaaaggagaa
attgaagaagatgatgaactatttatagtcgatgacaatggtgaaacacaactgtttggt
ttcactggccaagactttgaaaacaagcttcgagttcctcttcttgaaatactgaaatac
ccttatctgctcttacatgagcatgtcaatgaattatgtgttgaagcactttgtaggatg
gagcaagctaattgctcctttcaggtatttgacaaacatccagggatttatttgttcttg
gtacatcccaatgaaatggttcgacgatgggctattctaacagccagaaacttggggaag
gtagacagagatgattactatgatttacaggaagtattgacttgcttatttagagttatt
gaattggggcttttagaaagtccagatatttatacttcttcagaatttgagaagggtaaa
cttgtccttttgccatctcatatgtatgatacaaacaactacaaaaactactggttagga
atctgtatgttgctaactattcttgaggagcaagccatggattctttgttgctgggctca
gaaaagcaaaatgattttatgcaatcaatacttcatactatggagaaacaatcagatgag
gacagtgtagatcctttctggccagcattgcactgcttcatggtgattctggatcgtctg
ggctcaaaagtctggggtcaacttattgatcccattgaagcattccagaccattattaat
aatgtgagctacaataaggaaattcaaaatatacgcaacagttccacaaggaccaagtta
gaacctgaatcagatttggaggaaatggtgacttgcagccagattgtgtacaattataat
cccgaaaaaaccaaaaaggattcaggatggagatcagctatttgccctgattactgccct
aacatgtatgaagagatggaaacattagccagtgtacttcagtctgacattggacaagac
atgcgtgttcataacagcacgtttctttggtttatcccttttgttcagtccctcatggac
ctcaaggatttgggtgtagcttacatagtggaggttattcatcatctatattcagaagtc
aaagatgtcctcaaccaaaaagtagcagtgtgtgacacagtcactgagtttttccttctg
atactagtgtcagtaattgaactgcatagaaataaaaactgtttgcatttgctgtgggtt
agttctcagcagtgggtagaagctgtagtgaaatgtgctaaacttcctaccacagcattt
gcacggagtgcagaaaagacagctggaagctactccaaaggaacaaatgtaatatcttct
ttgcctttgcatcaaattccatctaattctgtacagcttgcttgtgtgcagctaattcga
agtcttcttagagaaggatgccagcttggacagcaaactctttgtaaacagttcttagac
aagctcaacttgtgtctgaggggaaatttgtcccttggttggcatttaaatagtcaggag
acccttgaattacaaacatgtttgaaacaaatcattaaaaacaaaaaggtcaaaggattg
ccatgtagcacttttgtggataggactgtagcatgtaaaactccccctgcaatttatatt
aaggaagaaaatgatgtacctgtggagagatcaaaaagggatacaagttctcaggacagt
tctagtccatcattttctaaggaacctttgagagctgatgtctatcgaacacaagagagt
ccatctctaagaagaagttatagttgggaggaggaaaatagacaaacatacttgaaagag
tcaaaattagatgaccttttttcaaataaatcatgcttaaagcaagaaaaagcccctgat
gctaaaagttctcataatcatgaaattttggataatgcagaaaaagagaaagatacttca
gagaacaactctccaaatacacacctggatttggcttcaagaaataattcaatggaaggg
ggatatgacagaacaacaaatattcagacatgtttaacagtgactgactctagatctgat
tctccccaaaatgtatcaagctcaagtgatgattctcgttccaaaaatgattctggcttt
aagaactcaaagtttaggactaaagcacagaaggatgaattatgtgcaaaactattacag
gtaatgaaggaacacaaaaaaacgaccatggtttccagtgttaataatttagaatcaaaa
cagagttcatccattttggggagtcataatccatgcaaagatgtggagattcagaaaggg
tttgccttaatacaaaatgcacagtcagagccttgtactacttcagaggatacaataaat
gaagaagaatcaagaaatgataattcattgcttataaggaaaaaatcagatgctaggcag
ctagatcctttaacatttcataaaaacaattatctatcacaggaaagtgatagtgatgat
gatgatgatgatgatgatactgataatgatgatgatactgatgatgatgatgatgatact
gatgatgatatggtttcacttaaaacaattagaaataccttactgaaaaagaaatgtcag
cttataaatcagccagacaggcatgaatcaaaggacagtaactatgaggaagataatggt
actgatcatgttccatgtaatttggcaagagaggaagtgcctcctcagaattttaaattt
agcaccttaacagattctcaagtagataaagacctggatagattgcctttcattgcccat
attagtgttcttaatttcccttcagattcaactccaggaagttcttaccagctacagaaa
aaagacaaagatgttttaagatattctccagttagccaaagtaatgaaccaacctctgtt
gtagaaagcactagaaatcaagttataatcatttctgattcagatgatgatgaaaggtca
ccaaatcttcagaaacaaatgaaaaaagataaaatagacattaaaagagaatttccagaa
gagtacccttcaacttcaaataccattttggaaaacaaactagaaaaagaagaaaaaaca
aaatctcctttgctggttgaggaatctgattcacagttttttgagtttgaaactccacat
gaagtattttctgtttggcaagattctgaaacagagagcaaacattctcttcaggaaagt
gaaccagaacaagactcctttttgacttcaacaggtgagagtggattagatgatcagaca
aatgactggggttatgatacagattatatatctgatgaagttattcagaaggtagcaaaa
actcttgaagaacatttagactcacagtgtcatgtttttcctaatgagaaatttcaaact
gaatcaaaaactaagaaacaaccatataatgcacctatggctgaagatctttcatcttgt
ttaagaaatgcagaaaaacctattatttgtatttctggggatcttactgaagagcacatt
gaaaatgtagatgaggagaagaaagaatctacatctactctttcagcatcacctaattta
aattttgaaatttcctctgaagaatcaagcaaacagaattctcctcaatctctttccagt
ccaaaactcaccaaaaaaatgccactttctaaaaattcaaaaaaaatcaacattaacccc
ccaaggaggcagaacaaaaaaaataatcaaactagtcctaaaaagatactttgtagaaca
atgcctgctgtgattcctccaaagaaatttcgccagtgtcctgaaccaacctcaactgct
gaaaaacttggtctgaagaaggggcctcggaaagcatttgacttatctcagcgatcttta
gattttgtggtaaagttacgtgatcatggaaaaactgcaggtgaagttgatactcagcag
aagaagaagacgacaaaattaattactccacagactctggttgtcaaaaataacaagaaa
atgttggcatgtcaagatcttcagtttttgagacagataagacccaagtcacacaaaaat
caacaagcactttctgccactcatagtaaagagtcttctccaaagacagttacaaaacca
gcccagaattctgaagctattattcaagcatcttctggacccagtgacaattttaaggaa
aaaaataaacaggcctcaggcactgatacaaagcagtcaagaaaaagctcattttctggg
acagaaacagtcaaagcaaaaagtctaacacaggttcctaatgatagtcctcattctacc
aaacctggttgtacagaattaaatgtaagagtggaaacaactgaagccagtatctctact
tcaaagaatcattcatccaactcatcttctgttggaggcgatttaacaggggtcgtccaa
ccattaccttgtttacattctgaggggatatcttttagagaagatgagtctgatgttaac
agtgatacagaggaaaataatttgtttttaacacaacatgatcctgtagatatggaatta
agttcacaagtagagagttttaatgactttgaagtttctattggaaaagatacagtagaa
atggaggaaggtcctaaaaacttcactgcagacagagctttgagtaatataaaatgtaag
cacaaagattgcactaacactgtggaaaatcagggtgaatattgctctctacattctgaa
gctaaagtatctgatgaccatgtttttgttaaaccagccttgccactttcactgtctaac
aaagctataaagtctactaccaaaatttttagttcaagtagtaattctcgaaatgctcat
ctttctagagctattgaaaatagtttaaaactcctgccagcatcaaagaatcaaacaaat
ttgacagccacaacaacgccaaaactaatgcaaccagtctttccattagttcaaaaacca
atattgaaggatgaggggaaaaatttatccaatattcttcaaccacagaatatgcagact
tctccaaattacttcaaaaggcctgctccactgagcctccttgagacaaaaagaactttt
caagcttcctctgctacaaattttcctatacgacaatctatatttgacagttttattaag
gagatcttaaaatggaaatatgaaatgtttgtgaactttgatcagtttgggcctccagca
aatctttgccaggccatcttaaaacctgttcctgtaacatttcaaaattctgaagactat
ttaaatgtttttttccctttgctgatcctgaatacttttgaaacagtggctcaagaatgg
attgacaacccaaagaaagggaacacctatgagcttcatttacgaagcttttctgctggt
gacataaattgtgggcagtttgtggtttgccttcaggagtgtgatatggctaaacaactg
catccaaaggaaaatgatttggtatttttgattcctaaaaaattaaatggaaaaaagaaa
gttattgaagaaagtgagatgaaggatcagcaagtgtatcattgtggttatgtgtctcag
tttcgacgctcttcagtcaggctccatggtgtaatggaaagagcactggatttggagtca
gaagacctaggacataatgcacaatttgagggttgcctttccatccagactcaaagcaat
ttgtcattccacataaatgaatcaatagactgtattgtgatcagttctttggtgactaca
caacggaaattgaaagccttgtcccttttggggcggaatacagtggttccactggccagg
gcaattctgaacccaagtacttcagacttttgtcctcgagattcactgaacacggctcct
gagaggattcttacctacctgaaagactataatgaagatcaaaaaaaagcaattgaagtt
gcatatgctatggtaaagcaacctcccctaattgccaaaatctgcctgattcatggacct
cctggaactggcaagtcaaaaactattgttggcctcctataccgaattctgacagagaaa
ccaaagaggggagattcagatgaaaacttgaatgccaaaatcaaacgaaaccgtgttctt
gtatgtgcaccctctaatgcagctgttgatgaacttatgaaaaaaatcattcttgaattt
aaagaaaaatgccaagacaagaagaatcctttgggaaattgtggagatataaatttagta
cggctgggcccagaaaaatctattaataatgaagtcctaaaattcagtttggatagtcaa
gttaaccacagaatgaaaaaggacttgcccagtcatattcaggagatgcatgagagaaag
gaacatttggatgttaaattagacaagctttctcgccaacgagctttggatcgatgtgaa
aaagggcagaagagatcaaatttagatgaagaaattgcacgaatttctaaagagaggcag
cagcttgcttctaaacttaaagaggttcgaggacgcccacaggaaactcagagtagcatt
attctggagtcacatatcatctgctgtacattgagcacaagtggtggtttgctgctagag
tctgcttttcgtaggcaaggatgtgtccccttcagttgtgtcattgttgatgaggctggg
caatcttgtgagattgagactcttactccatttatccatcgttgcaacaaacttattctg
gttggagatcctaaacagctccctcccactgtcatttctgtgaaagcacaggaatatggc
tatgaccagtcaatgatggctcgattatacaaacacctagaagaacaggtgaaacagaat
gtgatcagtagatcacctgttttgcagctgacagttcaatacaggatgcatcctgatata
tgtctcttcccatctagttatatttataacagaactttgaaaacaaacaggttgactgaa
gagagtcgatgtacatcagactggccatttcagccttaccttgtgtttgatgtgggagat
ggttcagaaagacgggaaaatgattcatatgttaatgtccaagaaataaaactagtaatg
gaattaattaaactgatcaaagacagaagaaaggatattactatgcgtaacattggcata
atcacacattacaaagcacaaaagatgatgattcaacaggaattggacaaagaatttgaa
agaaacagaccaggggaagtcgacactgtggatgcattccagggtcgccaaaaggattgc
gttattgttacatgtgtcagagcaaatgcttcacaaggctcaattgggtttctggcaagt
ttgcaaagattgaatgtaaccattactcgagccaagtatagtctgtttatccttggacac
ttgaggactttaatggaaaaccaacattggaatcacctgattcaagatgctcagaagcga
ggtgccattattaggacttttgacaagaattataagtatgatgcaatgaaaattttgaaa
ctcaaatccatgccacagcgaagcctatcacatccttccatggtagtgccagaaattact
agatcccagaatagcttgcccagcattaagccaaaagaagtgatgaacaaactggacagt
gttatttctaagaccgccgctgttgcttctccacggcgtagcagcacttccttgttacat
gctgacattcagccctttgactgcagagaagctacagttgttacaaaagctactgaggtg
cctattgtccgggacccaagactagccaaaagaaatgaccgtgatgctgcagagaaattt
ctgggagagacacaaccattcagtatccagcatccaagagtatcagcacccatatgtgaa
cctggccttcctttaactcaccaggaccccagcagtatcttacagcaccttttttcaaaa
gtagcagcctccaacaattgcaatctgactgtacaacttgaagctccctctgcaagtacc
tctgtgcccacaaacaaaagaaaaaccagtgaagaggaaggatctggctatggaagagaa
gtaacgtcttctagagaaggacaagaaaagtctgggtataggaaggactatcacccagat
agggactattgcttggacaggaggagaaaagaaaaccaagacagtcattcaaaaagaaga
aaactttcatag |
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