KEGG   Monodelphis domestica (gray short-tailed opossum): 100017674
Entry
100017674         CDS       T01031                                 
Symbol
THOC6
Name
(RefSeq) THO complex 6
  KO
K13175  THO complex subunit 6
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03013  Nucleocytoplasmic transport
mdo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100017674 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100017674 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdo03019]
    100017674 (THOC6)
   03041 Spliceosome [BR:mdo03041]
    100017674 (THOC6)
Messenger RNA biogenesis [BR:mdo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100017674 (THOC6)
Spliceosome [BR:mdo03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100017674 (THOC6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR36-Utp21_2nd Beta-prop_NOL10_N WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_EML ANAPC4_WD40 NBCH_WD40 EIF3I Beta-prop_CAF1B_HIR1 WDR54 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd TRM82_WD Beta-prop_WDR36-Utp21_1st Beta-prop_IP5PC_F CFAP251_N Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_RIG_2nd DSE1_N ASA1 Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 100017674
NCBI-ProteinID: XP_001371161
Ensembl: ENSMODG00000016473
LinkDB
Position
6:complement(147738719..147742565)
AA seq 369 aa
MVGCGPASRPRKQAKQKWQPEGRRLDVRKNFLTRRDMSCSMEVQRALERLHMTIFSQSVS
PCGKFLAAGNNYGQIAIFSLSAALSSEAKEESKKPLVTFVAHDGPVYSLVSTDRHLLSAG
DGEVKAWLWGEIIKKGCKEVWSRHPPYRSSLEVPEINALLLNPKENSLLLAGGDCQLHTM
DLETGSFTRALRGHTDYIHCLALRERSPEVLSGGEDGTVRLWDLRTGEEVQTIEVYRHEE
CARPQNGKWIGCLATDSDWMVCGGGPALTLWHLRSATPTTVFPLRAPQKHVTFYQDLILS
AGQGPCVNQWQLSGELKAQVPGSSPSLLSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLG
YRAFSLSFS
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggtggggtgtgggccggcatcaaggccaaggaaacaggccaaacaaaaatggcagcca
gagggaaggagattagatgtcaggaaaaacttcctgactcggagggatatgagttgtagt
atggaggtacaaagggctttggagcggctgcacatgacaattttctcccagagtgtttcc
ccctgtggcaagttcttagcagcaggaaacaactacgggcagattgccatcttcagttta
tcagctgctttgagctcagaggccaaagaggaaagtaagaagccattggtgacctttgta
gcccatgatggacctgtgtacagcctggtctcaacagaccgacatttgctcagtgcaggg
gatggtgaagtgaaggcctggctttggggagagatcataaagaagggctgtaaagaagta
tggagtcgccaccccccatacaggagcagcctagaagttcctgaaatcaatgctttgctg
cttaaccctaaggagaattccctcctcttggcaggaggtgattgccaacttcatactatg
gatctggagacagggtcattcacacgtgcacttcgaggtcacactgattacattcattgt
ctggctcttcgggaaagaagtcctgaagtgctgtctgggggtgaagatggcactgttcgt
ctttgggatcttcgtacaggtgaggaagttcagaccattgaagtttacagacatgaggag
tgtgccagaccccagaatgggaaatggattggatgtttagcaactgactcagactggatg
gtatgtggaggaggccctgctcttaccctttggcaccttcggtctgccacacccacaaca
gtgtttccacttagggctccacagaaacatgtaaccttttatcaagacctgatcctttca
gcaggacagggaccctgtgtgaaccagtggcagctgagtggggagctaaaagcccaggta
cctggctcctcacccagcctacttagtcttagcctcaaccagcagcctgctgcaccagag
tgcaaggttctgacagctgcaggaaatagctgtagggttgatgtcttcactaaccttgga
taccgagctttctccctctccttctcttga

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