Monodelphis domestica (gray short-tailed opossum): 100017952
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Entry
100017952 CDS
T01031
Symbol
ATXN2
Name
(RefSeq) ataxin 2
KO
K23625
ataxin 2/2L
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo05014
Amyotrophic lateral sclerosis
mdo05017
Spinocerebellar ataxia
mdo05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100017952 (ATXN2)
05017 Spinocerebellar ataxia
100017952 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
100017952 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100017952 (ATXN2)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100017952 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
100017952
NCBI-ProteinID:
XP_016287892
Ensembl:
ENSMODG00000012221
LinkDB
All DBs
Position
3:482775530..482854302
Genome browser
AA seq
1053 aa
AA seq
DB search
MRMVHILTSVVGSKCEVQVKNGGVYEGVFKTYSPKCDLVLDAAHKKTTDSSPGPKREDIV
ERILFKCSDFVVVQFKDMDSNYARRVPSETDAFTDSAISAKVNGEHKEKDLEPWDGGETA
TTEEFEALETDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREAR
ANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNASEREGHSINTRENKYIPPGQRT
RDVMSWGSGRQNSPRMGQPTSGPTPPRSGSHTSEFSLNSASDQRVVNGGVPWPSPCPSPS
SRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGP
PRMSPKAQRHPRGHRVSTGRGSISSGLEFVSHNAPGEVTTPPVARSSPSGGTWSSVVSGV
PRLSPKTHRPRSPRQSNIGNTPPGPILSSPQAGTVPTESMAVPVPAASPTPANPASNRAV
TPSSDAKDSRLQDQRQNSPAGNKENIKPSETSPSFAKVENKGISPIVSEHRKQIDDLKKF
KNDFRLQPSSTPDNVDHLLNKNREGEKSRDMIKDQPEPSPKDVLLETSSASCTSGSSKPS
SPCISPSASGSSDQKRGPEVTSQGVQTASPGSKHEKEEQEDKKDAAEQVRKSTLNPNAKE
FNPRSFAQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQP
LYPIPMTPMPVNQAKTYRAVPNMPQQRQDQHPQNTLMHPASAAGPPIVATPPAYSAQYVA
YSPQQFPSQPLVQHVPHYQSQHPHVYSPVIQGNTRMMAPPTHAQPGLVSSSATQYGAHEQ
THAMYACPKLPYNKETGPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQNQ
HSGTHTAPSPVQHHQHQAAQALHLANPQQQPAIYHAGLAPTPPSMTPGSNTQSPQSSFPA
AQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAA
IAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggttcatatacttacatcagttgttggatccaaatgtgaagtacaagtgaaa
aatggaggtgtatatgaaggagtttttaaaacatatagccctaagtgtgatttagtgctt
gatgctgctcataagaaaactacagactccagccctgggccaaagcgtgaagatatcgtg
gagaggattttgttcaagtgttctgactttgtggtggtacagttcaaagatatggactcc
aattatgccagaagagttccttcagaaacagatgcatttactgattcagctatcagtgct
aaagtaaatggtgaacacaaagagaaggaccttgaaccatgggatggaggtgaaactgcc
accactgaagagtttgaggctttagagactgatgtttctaatggatgggatcccaatgat
atgtttcggtataatgaagaaaattatggtgtagtttccacctatgatagcagtttatca
tcatatacggtaccattagaaagagataactcagaagaatttttaaaacgggaagcaaga
gcaaaccaattagctgaagaaattgaatcaagtgctcaatacaaagctcgggtagccctt
gaaaatgatgatagaagtgaagaagaaaaatatactgctgttcagagaaatgccagtgaa
cgtgaggggcacagcattaacacaagggaaaacaagtacattccacctggacaaagaact
cgagatgtcatgtcatggggaagtggtagacaaaattcaccaaggatgggccagcccaca
tctggccccacccctccaagatctggatctcatacttcagagtttagtttgaattctgca
tcagaccaaagagtcgttaatggaggtgttccctggccatcgccttgcccatctccttcc
tctcgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgggcagccacc
cctacaaggccgccctccaggcccccctcgcggccatccagacccccgtctcacccctct
gctcatggttctccagctcctgtctctactatgcctaaacgcatgtcttcagaaggccca
ccaaggatgtcaccaaaggcccaacgtcaccctcgtggtcaccgagtttctactgggagg
gggtcaatctccagtggtttagaatttgtttcccacaatgcaccaggcgaagtaactacc
cctcctgtggcacggagtagcccctcaggaggaacatggtcatcagtggtcagtggggtt
ccaagattatctccaaaaacacatagaccaagatctccaagacaaagcaatattggaaat
actcctcctggtccaattctctcttctccccaagctgggactgtgcccacagaatccatg
gctgtgcctgtgcctgctgcatctcccacacctgccaatcctgcttccaaccgagcagtt
accccatctagtgacgctaaagattctaggcttcaggatcagaggcaaaattctccagct
ggaaacaaagaaaatataaagccgagtgagacttccccaagctttgcaaaagtagaaaat
aaaggtatatcacccattgtttcagaacatagaaaacaaatcgatgacttaaagaaattt
aagaatgattttaggttacaaccaagttctactcctgacaatgtggatcacctcctcaac
aaaaacagagaaggagaaaagtcgagagatatgatcaaagaccaacctgaacccagccct
aaggatgttctcctggagaccagcagtgccagctgcacaagcggcagcagcaagccgagc
agtccttgcatttctccatcagccagtgggagctcagatcagaagagaggcccggaggtc
acttctcaaggggtacagacagccagcccaggaagtaaacatgagaaggaagagcaagag
gacaagaaagatgcagctgagcaagttaggaaatccacgttgaatcccaatgcaaaggaa
ttcaaccctcgttcttttgctcagccaaagccttctaccactcctacttcaccgcgtcct
caagcccagccaagcccttccatggtgggtcatcaacagccaactccagtctatactcag
ccggtttgttttgcaccaaatatgatgtacccagttccagtgagcccaggcgtgcagcct
ctctatcctatacccatgacgcctatgccagtgaaccaagccaagacatatagagcagta
ccaaatatgccacaacagcggcaggatcagcaccctcagaacaccctgatgcaccctgcc
tctgctgcgggccctcccatcgtggctacaccgccagcctattcagcacaatatgtggcc
tatagccctcagcagtttcctagtcaacctcttgttcagcacgtgccacattatcaatct
cagcatcctcatgtctatagtcctgtaatacagggtaatactagaatgatggcaccacca
acccatgcccagcctggtttagtatcctcttcagcaactcagtatggtgctcatgagcag
acacatgcgatgtatgcatgtcccaaattaccatacaacaaggagacaggcccttctttc
tactttgccatttctactggttcccttgctcagcagtatgcccatccgaatgctacccta
cacccccatactccacatcctcagccttctgccactcccactggacaacaacagaaccaa
cattcgggaacccacactgctcctagccctgtgcagcaccatcagcaccaagctgcgcag
gcccttcatctggcaaacccccagcagcagccagccatttaccacgctggtctggccccg
accccaccttccatgacaccgggctcaaatacacagtctccacaaagtagtttcccagca
gcacaacaaacagtctttacgattcacccctctcatgttcagcctgcatataccaaccca
ccccacatggcccacgtgcctcaggctcatgtacagtcaggaatggttccttctcatcca
actgctcatgctccaatgatgctaatgacgacccagccacctggcggtccccaggccgcc
atcgctcaaagtgcactacagcccattccagtctcgacaacagcgcatttcccttatatg
acgcacccttcagtacaagcccaccaccaacagcagttgtaa
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