Monodelphis domestica (gray short-tailed opossum): 100018487
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Entry
100018487 CDS
T01031
Symbol
USP39
Name
(RefSeq) ubiquitin specific peptidase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100018487 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdo03041
]
100018487 (USP39)
Spliceosome [BR:
mdo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100018487 (USP39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100018487
NCBI-ProteinID:
XP_001363937
Ensembl:
ENSMODG00000015632
UniProt:
F7FEM4
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Position
1:complement(717766383..717802746)
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AA seq
572 aa
AA seq
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MSSRTKRETRSSARGKRDAESRSSSSRSKRERDPEASGSRGSPVRVKRERNSEPSAARDY
SGGSVPALVPAPPLSGARVKREREIDEDSEPEREVRVRYGRLDSEDRRSRHCPYLDTINR
SVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFY
CLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKAN
DYANAVLQALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAH
VSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSM
RIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQV
PLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNF
PITNVDLREYLSEEVQAVHKDTTYDLIANIVHDGKPTEGSYRIHVLHHGTGKWYELQDLQ
VTDILPQMITLSEAYIQIWKRRDSDETNQQGA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccgcactaaacgggagacgcggagctccgcccggggcaagcgggatgcggag
tcccggagcagctcgagccggtcgaagcgggagcgggatccggaggcctcggggtctcgg
ggaagcccggtgcgcgtaaagcgggaacggaactctgagccgtcggccgcgcgagactac
tcaggcgggagcgtgcctgcgctcgtgcccgcgccgccgctgtcgggggcgcgcgtgaag
cgggagcgcgaaatcgacgaggattctgaacccgagcgggaggtgcgagtgcgatatgga
cgccttgactctgaggaccgaaggagccggcattgcccctatctggacaccattaacagg
agtgtcctggactttgactttgagaagctctgctctatttccctttcacacatcaatgca
tatgcttgcctggtgtgtggcaaatactttcagggacgagggttgaagtctcatgcctac
attcacagcgtccagttcagccaccatgttttccttaacctgcataccctcaagttttac
tgccttccagacaactatgaaattattgactcctccctagaggatatcacttacgtcttg
aagcccacatttaccaagcaacagattgcaaatttggacaagcaggccaagctatctcgg
gcttatgatggtactacatacctgcccggtatcgtaggactgaataatatcaaggccaat
gactatgcaaatgccgtgcttcaggccttgtctaatgtcccacctctccggaactacttc
ctcgaggaagaaaactacaagaatatcaagcgtcctcctggggacatcatgttcctgtta
gtacagcgctttggagagttgatgaggaagctgtggaaccctcggaacttcaaggcccat
gtctctccccatgagatgctgcaggctgttgttctctgcagtaagaagacttttcagatc
accaagcaaggtgatggagtagactttctttcctggttcctgaatgccttgcactcagct
ctgggagggacaaagaagaaaaagaagactattgtgacggatgttttccaggggtccatg
aggatcttcactaagaaactgccacacccagatctgccagcagaagaaaaggagcagtta
ctacataatgatgagtaccaggagacaatggttgaatccacctttatgtacctgaccttg
gatcttcccacagctccactttacaaggatgagaaggagcagctgatcatcccccaggtg
ccactcttcaacatcttggccaagttcaatggcatcactgagaaggaatacaagacgtac
aaggagaactttctgaagcgcttccagctcaccaagctgcccccgtatcttatcttttgt
attaaaaggttcacgaagaacaacttctttgtggagaaaaatccaaccattgtcaacttc
cccatcacaaatgtggacctgagggaatacctctctgaggaagtgcaggccgtacacaag
gacaccacctacgacctcatcgccaacatcgtgcatgatgggaagcccaccgagggctct
taccggatccacgtgcttcaccatgggacaggcaagtggtatgagctccaggatcttcaa
gtcactgacatcctcccacagatgatcacgctgtcagaggcctacatacagatctggaag
agacgggacagtgatgaaaccaaccagcagggggcgtga
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