Monodelphis domestica (gray short-tailed opossum): 100018534
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Entry
100018534 CDS
T01031
Symbol
IFT88
Name
(RefSeq) intraflagellar transport 88
KO
K16474
intraflagellar transport protein 88
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mdo03037
]
100018534 (IFT88)
Cilium and associated proteins [BR:
mdo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
100018534 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_14
TPR_19
TPR_6
TPR_16
ANAPC3
TPR_11
TPR_17
TPR_10
ARM_TT21_4th
TPR_9
TPR_CcmH_CycH
ARM_TT21_5th
TPR_21
TPR-S
TPR_15
RPN7
ARM_TT21_C
HEAT_Nup120
HAT_PRP39_C
ARM_TT21_2nd
DUF6584
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
100018534
NCBI-ProteinID:
XP_001366386
Ensembl:
ENSMODG00000008196
UniProt:
A0A5F8G7R7
LinkDB
All DBs
Position
4:289745034..289863397
Genome browser
AA seq
825 aa
AA seq
DB search
MMQNVHLAPETDEDDLYSGYNDYNPTYDTEELENDTAFQQAVRTSHGRRPPITAKIPNTA
ATRPIATGYGSKTSLTSSLGRPMTGAIQDGVARPMTAVRAAGFTKAALRGSAFDPLGQSR
GPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMS
MAPNLKAGFNLILSYFAVGDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLVIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAIGYDWCVEVVKASQYVELANDLEI
NKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQANSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD
CFLKLHAILRNSAQVLYQIANVYEIMEDPNQSIEWLMQLISVVPTDSRALSKLGELYDNE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIKYFERAALIQPTQVKWQLM
VASCYRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEIREQRIKSGRDSTGSSRSKREGSAGSDSGQNSSASSKGERLSAKLRSLPGTNEPYESS
SNKEIDASYVDPLGPQTERPKTAAKKRIEEDDFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcacctggctccagagactgatgaagatgatctttattctggttac
aatgattacaatccaacctatgatactgaggaattggaaaatgatacagcttttcagcag
gctgtgagaactagtcatggcagaagacctccaataactgccaaaatacccaacacagca
gcaactcgaccgatagccactggatatgggtctaaaacatcactgacttcatcattggga
aggccaatgacaggagctattcaggatggagttgctcgccctatgacagcagtaagagca
gctggtttcacgaaagcagctttaagaggttctgcttttgatcctcttggtcagtccaga
ggcccagctcctccattagaagccaaaaatgaagacagtccagaagaaaagattagacaa
ctagaaaaaaaagtaaatgaattggtagaagaaagctgtattgccaacagttgtggagac
ttaaaattggccctagaaaaagcaaaagatgcaggaagaaaggagagagtattggtgaga
caacgtgaacaagtgacaactcctgaaaacatcaatttggacctaacttactcagttctt
ttcaatttagccagtcagtattcagctaatgaaatgtatgctgaagcactaaacacatat
caagttatagtgaagaataaaatgtttagcaatgcaggaagactgaaggtaaacatggga
aatatttatttaaaacagagaaattattccaaagccatcaaattctatcgaatggctcta
gatcaaattccaagtgttcataaagagatgaggattaaaataatgcaaaacattggtgtt
acatttattaaaactggtcagtactcagatgctattaattcatttgaacatataatgagc
atggccccaaatctgaaggcaggcttcaatttgatcctgagttattttgctgttggagat
cgggaaaaaatgaagaaagctttccaaaaactgattgctgttccattagaaattgatgaa
gatgacaaatatatttcaccaagcgacgatccccatactaacttagtgattgaagctata
aaaaatgatcatctaagacaaatggaacgggaaaggaaagccatggcagaaaaatacatc
atgacagcagctaaactcattgctcctgtaatagaaacatcttttgctataggatatgat
tggtgtgttgaagtagtaaaagcttctcaatatgtagaacttgcaaatgatctagaaata
aataaagcaattacatacttgaggcaaaaggacttcaaccaagctgtggaaactttaaaa
atgtttgaaaaaaaagatagtcgagttaaaagtgcagctgcgaccaacctttcattcctt
tattacttggagaatgaatttacccaagcaaatagctatgcagatttagctgtgaactct
gatagatacaatccatcagctctcactaataagggaaatactgtttttgcaaatggagat
tatgagaaagcagcagaattttataaggaagccctgagaaatgactcctcttgtactgaa
gcactttataatattggtttaacatataagaagctgaaccgcctagatgaggctttggat
tgtttcctgaaacttcatgcaattctacgaaacagtgcccaagttctttaccagatagca
aatgtatatgaaataatggaagatccgaaccaatctattgagtggttgatgcagttgatc
agtgtggttccaactgattcccgtgccttatccaaactaggagaactgtatgataatgaa
ggagataaatcccaagcttttcaatattattatgagtcatatcggtatttcccttctaac
atcgaggtcattgagtggcttggagcctattatattgatacccaattttgtgaaaaagcc
attaagtactttgaaagagctgctctcattcagcccactcaagtgaaatggcagctaatg
gttgctagttgctacagaagaagtggtaactatcaaaaagccttagatacttataaggag
attcacagaaaatttccagaaaatgttgaatgtctacgcttcttagttcgcctctgtaca
gatattggactaaaagaagttcaagaatatgcaacaaaactcaagagattggaaaaaatg
aaggaaataagggaacagcgcataaagtctggcagagacagcactggcagttctcgtagc
aaaagagagggaagtgcgggcagtgatagtggccagaactctagtgccagtagcaaaggt
gagcgtctgagtgccaaattacgatctttacctgggacaaatgaaccttatgaaagtagc
agtaacaaagaaatagatgcctcatatgtggatccactgggtccacaaacagaaagacca
aaaactgcagccaaaaaacgaattgaagaggatgattttgctgatgaagaattaggagat
gacttgcttcctgagtaa
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