Monodelphis domestica (gray short-tailed opossum): 100018584
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Entry
100018584 CDS
T01031
Symbol
SYNPO2
Name
(RefSeq) synaptopodin 2
KO
K24066
synaptopodin-2
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100018584 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mdo04990
]
100018584 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
mdo04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
100018584 (SYNPO2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
100018584
NCBI-ProteinID:
XP_001371751
Ensembl:
ENSMODG00000018955
UniProt:
F7G0F4
LinkDB
All DBs
Position
5:complement(10665089..10865142)
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AA seq
1241 aa
AA seq
DB search
MGTGDFFCISMTGGAPWGFRLQGGKGHNQPLQVAKIRGKSKASQSGLREGDEVVSINGTP
CADLTYTEVIKLMESITDSIQIFIKRPSTGINETYIPEAENKEQPLLIQEEHVERTSLQI
WPHCSQDDRALPDPKDERSPGDCSGESNLYFPRRALKTEECRPGTVVELQLSLSHDRHQD
PGASVGTGPGGAKNHTSPDPHPDQLQGGLDQGTAVFSEEKEDSGEGPLRKVTQLSSGPEL
QVTQGREAGAPHPSRAKVIVNYSSDREKAEGSNWTGRKGCGDFQVEGGRAEAPPSVVSFP
ISSEGTEQGEDQQISERDHRRPHKHRARHARFRRSESLSEKQVKEAKSKCKSIALLLTNA
LNPNSKGVLMFKKRRRRAKKYTLVSYGTGELGREADTEEESERDGLVEVKFTSESEVDEE
VFSDADDDNPETLVGTRDWDRSGPVDEDKKLRSGDKMQMLPDSSGKGVLMFAKRRERMDQ
ITAEQEEKAEGVLGRGEFEDGHADGLQTVTSYQRREEESMRVQSSSSVSKSYVEGSHTVQ
HNGFSGAPEMPEAQRLAASNRTAKPFPGSMNQTAMPFSPTRNLASPLYDFPAPPPYSAVS
PPPEVLSRGMSSPLASPAQPPPWPQPAPWYEQPEQIASRDERISVPAKRTGILQEARRRG
ASKPMFTFKEAPKVSPNPELLSLVQNAEGKRGAGAGFESGPEEDYLSLGAEACNFMQGHS
SKQKTPPPVAPKPSAKPSSSQPTTPISPVWCPPSQSPPFTVSNQSQGIVASAIKIARPAS
TPYQPPPPPPNVAGPFKGPQAAVASMNYTPKVTPMGNAAVTPASGPGPSNELPKMSGKGA
ELFAKRQSRMEKYVVDSEKVQAHMARPQSPTPSLPASWKYSSNVRAPPPVAYNPIHSPAY
PPAAMKSQTAASASATSKPSKKKGKKPLNALDVMKHQPYQLNASLFTFQPPDAKEIPIPK
PAAKLGPVPVLKSAVPSAQPLVNASSPSTFRASSVCSMPSYPSQPTFYSEAAATPVSPSP
VPPPSLPTSPKLESSPPTYFVAPRPKFSAKKSGVTVQDDGQSLLFRRPVTPTLSPTSPLM
FQPSASYPGKPAGEPAKKPNKRFTPWEAAARSPLGLVDDAFDPRNIQDSIVAHVVSAAQR
KSLPEPLEYWKLGVSYAPQFQKTNLGPFNRRENGITSLPKSTRKTIYANNQDDAPLPYST
YYRKPSRTGFERMTMETKSEYGFSFSDGNYNPHPRGWKRET
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgggggactttttctgcatctccatgaccggaggggcgccctggggcttccgc
ctgcaaggtggcaaggggcacaaccagcctctacaagtggctaagattcgtggcaagagc
aaagcttcccagtctggtctacgtgaaggggatgaggtggtctctatcaatggcaccccg
tgtgcagatctcacctacacagaagtcatcaaactcatggaaagcatcactgattctatc
caaatatttatcaaaagaccatccactggaataaatgagacctacatccctgaggctgaa
aacaaagagcagcccctcctgatacaagaggagcacgtggagaggaccagcctgcaaatt
tggccccactgcagccaggacgacagggcacttcctgacccgaaggatgaaaggagccct
ggggactgctctggagaaagcaatctgtacttcccgagaagagccctgaagacggaagag
tgcaggccagggactgtggtcgagctgcagttgtccctgtcgcatgacagacaccaggac
cctggagcttcggtggggactggcccgggaggagctaaaaaccacacctctcctgacccc
cacccagaccagctgcagggagggctagatcaaggaacggctgtgttctctgaggagaag
gaggattctggcgaggggcccctccgcaaggtaactcagctctctagtggcccggagctg
caagtgacccaaggcagagaggcaggggccccccacccctccagggctaaagtgatcgtc
aactactcctccgatcgagagaaggcagaagggtccaactggacaggaagaaaggggtgt
ggtgattttcaagtggaaggagggcgggccgaagcacctccttctgtggtctcctttccc
atctcctcggaaggcactgagcagggagaggatcagcagatctccgagagggatcaccgg
aggccccacaagcaccgagctcggcacgcccgattccggaggagcgaaagcttgtcggag
aagcaggtgaaggaagccaagtccaagtgtaagagcattgccctcctcctcacgaatgcc
ctcaaccccaactccaagggggttttgatgttcaagaaacgccgccggagggcgaagaag
tacaccttggtcagctacggcactggcgagctcgggcgcgaagccgacaccgaagaagaa
agcgaaagggacggccttgtggaagtcaagttcaccagcgagtcggaggtcgatgaagag
gtcttctccgacgctgacgacgacaacccagagaccctggtggggacccgtgactgggat
cgatctggccctgtagacgaggacaagaagctcagaagcggagacaagatgcagatgctg
ccagacagctcggggaagggcgtgctcatgtttgccaagaggagggaaaggatggaccag
atcaccgcagagcaagaggagaaggccgagggagtgctgggccggggggaattcgaggac
ggccatgcagacggtctgcaaacagtcacttcctaccagaggagggaggaagagagcatg
cgagtgcagagctctagctccgtgagcaagagttacgtggaaggaagccacaccgtgcag
cacaatggtttcagcggagccccagaaatgcccgaggcccagagattggccgcctccaac
aggactgccaagcccttccccggatccatgaatcagacggccatgccattttcccctacc
agaaacctagcgagccccctgtatgattttcctgcaccgcccccctactctgcagtcagc
cctcctccggaagtcttgtccagagggatgtctagccccttagccagcccagcgcagcca
cccccatggccccagccagccccgtggtatgagcaacccgagcagatcgcttcccgagac
gagaggatttcagtgccagccaaaagaacgggcatactgcaggaggccaggaggagaggt
gcctcaaagcccatgtttaccttcaaagaggcacccaaggtcagccctaaccctgaactg
ttgtcactggtgcagaatgcagagggcaagcggggggccggggccgggttcgaatccggc
cccgaagaagactacctcagccttggagcggaggcttgcaatttcatgcagggccactct
tcgaagcagaagaccccacctcccgtcgcccccaaaccctctgccaaaccctcctcctct
caaccaaccactcccatctccccagtctggtgtccacctagccagtcgcctccattcacc
gtttccaaccagtcccaggggatcgttgcctccgccatcaaaatagctcggcctgcttcc
actccttaccagcctcctcctcctcctccaaacgtggctgggccctttaaaggaccccaa
gcagcagtagccagcatgaactacacacccaaggtgacgcccatgggaaacgctgcggtg
acaccagcctctgggccgggaccatccaacgaattgccaaaaatgagcggcaaaggagcc
gagctctttgctaagaggcagtcacggatggagaaatatgtggtagactcagagaaagtg
caggcccacatggcccggcctcagtctcccactccgtcgttaccagcttcctggaaatac
tcctctaatgttcgagcccctccgccggtcgcttacaatcccatccactctcctgcctac
cctccggcggccatgaagtctcagactgcggcatcggcttcagccacctccaagccgagc
aagaaaaagggcaagaagcccctcaatgctttagacgtgatgaagcaccaaccgtaccag
ctcaatgcatctctcttcactttccagcctccagatgccaaggagatcccgatcccaaag
ccagctgccaagcttgggccagtcccagtcttgaagtcagctgttccttccgctcagcca
ctggtcaatgcgagctcgcccagcaccttccgagcttcctccgtgtgctcgatgccatcc
tacccttctcagcccaccttctactccgaggccgcggccactccagtcagcccgtccccc
gtgccgccgccaagcctgcccacctctcccaagctggagtcgagccccccgacttacttt
gtggctccgaggcccaagttctcggccaagaaaagcggtgtcactgttcaggatgatgga
cagtcactactttttagaagaccagttacacccactctatctcccacttctcctctgatg
ttccaaccttccgccagttaccctggaaaaccagctggtgagcctgcaaaaaaacctaac
aagagattcacaccttgggaagcagctgctaggtctcctcttggccttgtggatgatgcc
tttgaccccagaaacatccaagattccattgtggcccatgttgtctctgctgcccagagg
aaaagcttgccagagccacttgagtactggaaactgggagtttcctatgcacctcagttt
cagaagacaaatctgggcccattcaacaggagggagaatggcatcactagcctgccaaag
agcaccagaaaaaccatttatgccaacaaccaggatgatgccccattgccatattctacc
tattacaggaaaccctctaggactgggtttgaaagaatgaccatggagaccaagtctgag
tatggcttctccttcagtgatggcaactataatccacacccaagaggatggaagcgtgag
acctga
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