Monodelphis domestica (gray short-tailed opossum): 100018655
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Entry
100018655 CDS
T01031
Symbol
GRIK1
Name
(RefSeq) glutamate ionotropic receptor kainate type subunit 1
KO
K05201
glutamate receptor, ionotropic kainate 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04080
Neuroactive ligand-receptor interaction
mdo04082
Neuroactive ligand signaling
mdo04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100018655 (GRIK1)
04082 Neuroactive ligand signaling
100018655 (GRIK1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100018655 (GRIK1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdo04040
]
100018655 (GRIK1)
Ion channels [BR:
mdo04040
]
Ligand-gated channels
Glutamate (ionotropic)
100018655 (GRIK1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
GLF
Motif
Other DBs
NCBI-GeneID:
100018655
NCBI-ProteinID:
XP_007493155
Ensembl:
ENSMODG00000020977
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Position
4:complement(3581285..3696437)
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AA seq
904 aa
AA seq
DB search
MEIRVLGRSRLWSKFAGWGLWFFCSLGIGISKTSQQVIRFGGIFETAENEPVNVEELAFK
FAVTNINRNRTLILNNTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHISSVSAV
QSICNALEVPHIQTHWKHPTMDKSDMFYINLYPDYAAFSRAVLDLILYYNWKTVTVVYED
NTGLIRLQELIKAPSKYNIKIKIRQLPSGXKDAKPLLKEMKRSQEFYVIFDCSYEMAAGI
LKQILFMGMMTEYYHYFFTTLDFFALDLEIYRYSGVNMTGFRLLNIDNPQVSSVIEKWSM
ERLQTLPKSEIGLLNGLMTTEAAMMYDAVYAVAIASHQASQMTISSLQCHRHKPWRFGHR
FINLIKEAQLDGLTGRITFNKTDGLRKDFDLDIISLKEEGTKKIGIWNSNSGLNMTDSNK
DRSTNITDSLANRTLIVTTILEEPYVMFKKSDKPLYGNNRFEGYCLDLLKELSNILGFIY
DVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGIS
ILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPYPCNPDS
DVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFL
TVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVK
NNDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKIT
IAILQLQEEGKLHMMKEKWWRGNGCPEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAI
GEFLYKSRKNSDVEQAFGFFYGLQCKQTQPSNSTSGTTFTMELDCGKLIQEEQGIQTPSL
VHTV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggagatccgagtcctgggccgttccaggctctggagcaagttcgccggctggggactc
tggttcttctgctctctaggcatcggcatctctaagacttcccagcaagtcatccggttt
ggaggaatttttgaaactgcagaaaacgaaccagttaatgttgaagaattagcattcaag
tttgcagtaaccaatattaacagaaaccgaacacttatacttaataacacattaacttat
gatatccagaggattaatctttttgatagttttgaagcctcaagaagagcatgtgaccag
cttgcccttggggtggctgcactatttggcccatcccatatttcttcagtcagtgctgta
cagtctatctgcaatgcccttgaagttcctcacatccagactcactggaaacatcccacc
atggataagagcgacatgttttacatcaacctctatccggattatgcagccttcagtagg
gcagttttggacttgatactctattataactggaaaacagtgaccgtggtgtatgaagat
aacacaggtctgatccgccttcaagagctgatcaaggctccttccaaatacaacatcaaa
ataaaaatccgccagctgccctctgggnataaggacgccaagcccctgctgaaggaaatg
aagaggagccaggagttctatgtgatatttgattgttcctatgagatggcggctggaatt
cttaagcagatcctttttatggggatgatgacggaatactatcactacttttttacgaca
ctggatttttttgcactagacttggaaatctacagatacagtggagtaaatatgactgga
tttcggctacttaacattgataatcctcaagtttcatcagttattgaaaagtggtcaatg
gaaagattgcaaactctacccaagtcagaaatcggtctactgaacggcttgatgacaacc
gaagcagctatgatgtatgatgctgtgtatgcggtggctatcgcctctcaccaagcttct
caaatgacgatcagctccctgcagtgtcaccgccataaaccatggcgctttggacacaga
tttattaatttgatcaaagaggcacagttggatggtttgactgggcgaatcaccttcaat
aaaacagatggcttaaggaaggattttgatttggacattattagtctcaaggaggaaggg
acgaaaaagattggaatttggaactccaacagtggtcttaatatgactgacagcaataaa
gacaggtccacgaatatcacggactcactggcaaatcgaacactcatagttaccaccatt
ctggaagagccctacgtgatgttcaagaagtctgacaagcctctgtatggaaataaccga
tttgaaggttattgcctggatttgcttaaagagttgtcgaatattctgggtttcatttat
gatgttaaactagttcctgatggcaaatatggagcccagaatgacaaaggagagtggaat
gggatggtcaaagaacttatagatcataaggcggacctggctgttgctcctcttaccatt
acgtatgtgcgggagaaggtcattgacttttccaaacccttcatgacgctggggattagt
attttatacaggaaacccaacggcacgaatcccggtgtcttctccttcctcaaccctctc
tctccggatatctggatgtatgttctcctagcctgcctcggagtcagctgtgtcctgttt
gtgattgccaggttcacaccctatgagtggtataacccctacccctgcaaccccgactca
gacgtggtggaaaacaattttactttgctaaacagtttctggtttggagttggagctctc
atgcagcaaggctcagagctaatgcccaaagctctttctacaagaatagtaggaggaatt
tggtggtttttcaccttaatcatcatttcatcctacactgcaaatctggctgccttctta
acagtagagagaatggaatctcccatagattcagcagatgatttggcaaaacaaacaaag
atagaatatggggcagtgcgagatggatcaacaatgaccttctttaagaaatcaaagata
tccacttatgaaaagatgtgggctttcatgagcagcaggcaacagacagccttggtaaaa
aacaatgatgaaggaatccaacgggtgctcaccactgactatgctctactgatggagtcc
actagcattgagtatgtgactcagagaaactgcaaccttactcagattggaggactcatt
gattccaaaggttatggagtaggaacccctattggctctccttaccgggacaaaattacc
attgctattctccaactacaagaggaaggaaaattgcatatgatgaaagaaaagtggtgg
cggggaaatggctgccctgaagaggacagcaaagaggccagcgctttgggagtagaaaac
attggtggcatctttattgtgctggctgctggacttgtcctgtctgtatttgttgccatt
ggagagtttctatacaaatcaaggaagaacagtgatgttgagcaggctttcggtttcttt
tacggactacagtgtaaacagactcaaccatccaactccacatctggaaccaccttcact
atggagttagactgtggcaaattgattcaagaggaacaagggattcagacaccgtcctta
gtccataccgtatag
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