Monodelphis domestica (gray short-tailed opossum): 100018936
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Entry
100018936 CDS
T01031
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04613
Neutrophil extracellular trap formation
mdo05014
Amyotrophic lateral sclerosis
mdo05034
Alcoholism
mdo05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100018936 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100018936 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100018936 (HDAC6)
09165 Substance dependence
05034 Alcoholism
100018936 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mdo01009
]
100018936 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100018936 (HDAC6)
04131 Membrane trafficking [BR:
mdo04131
]
100018936 (HDAC6)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100018936 (HDAC6)
Enzymes [BR:
mdo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100018936 (HDAC6)
Protein phosphatases and associated proteins [BR:
mdo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100018936 (HDAC6)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100018936 (HDAC6)
Membrane trafficking [BR:
mdo04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100018936 (HDAC6)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100018936 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100018936
NCBI-ProteinID:
XP_007507737
Ensembl:
ENSMODG00000010166
LinkDB
All DBs
Position
X:complement(71967397..71976688)
Genome browser
AA seq
1069 aa
AA seq
DB search
MASPVEKPGPSHRSSSPTRPPSASSSRMMGQKRGVRKGSPIPRASPSLADVRRRGRAKKL
SQVSELDLVTDLQDLDLEAGAAVPSGTGLVLDERMSSFHCPWDESFPERPERLQAVQEQL
ARDCLLERCLLIEAQPATPEELQLVHSQEYVDLMASTPQMTESERRALSDTYDSVYLHPN
SFPCALLATGALLRLVDALMTGEIRNGLAVVRPPGHHAQRESMNGYCMFNNIAIAARYAQ
ERHHVARILIVDWDVHHGQGTQFIFEQDPSVLCFSVHRYELGRFWPHLEASDWRATGHGK
GQGYTVNVPWNQVGMRDGDYITAFLHVLLPIALEFQPQMVLVAAGFDAMLGDPKGEMAAT
PGGFAHLTHLLMGLAKGRLILSLEGGYNLHSLALGVSATLQTLLGDPCPMLATPCAPCPS
ALASLSSTLAAHRPFWKVIQRFQSTSEDKEDEYRGVSLGPPPILESLGKSLEQALSLPPS
RTGLVYDEKMMEHFNMWDSHHPERPERIAQIAQHHMELGLTPRCFVLPARSATNQELLAC
HSEEYIERIRATSGLKPRDLHREGTSYNSIYISPHSFCCAQLAAGAACRLVEAILAREVQ
NGLAIVRPPGHHAERDAACGFCFFNSVAVAARHAQEVAGRALRILIVDWDIHHGNGTQHI
FEEDPSVLYVSLHRYDHGAFFPMAEDGASSHVGRGQGEGFNVNVAWNGPRLGDPDYLTAM
HHIVMPIAYEFNPELVLVSAGFDAARGDPLGGCLVSPEGYAHMTHLLMGLAGGRIALVLE
GGYNLTSISESMAACTRTLLGDPPPLMPWLRPPLPGTFLSLAEVAHIHQKYWQSLRLNAV
ETEAEVEEKEIPPEPAKESTPGQKLPDQRPSKALAIGPELEKQPLSPGLDETLGLESLQL
STCAPEELEAEPSIAKEKHPEDPGLLGEAAGGGGQAAATLLNVLGDQSEDEGATFYAVTP
LPWCPHLVTVRPVPEGGLDVTQPCQGCDTHVENWLCLSCYQVHCGRYVGAHMLQHHEASG
HPLVLSYADLSAWCYICQAYVNHEVLLEAKKTAYQAKFGEEMPTFPRQD
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcatccccagtggagaagccaggcccgagtcatcgaagcagtagcccaacccgccca
ccatctgcgtccagcagcagaatgatggggcaaaagcgaggagtccggaaaggatcgccc
atccctcgggccagcccaagtttagctgatgtccgacgaagagggagggcaaagaaattg
agtcaagtgtcagagctagatctggtgactgacctgcaggacctggaccttgaggcaggg
gcagcagtaccttcagggactggtctggtgctggatgagagaatgagcagtttccactgc
ccctgggatgagagtttcccagaaaggccagaacgccttcaggccgtgcaggaacaacta
gccagggactgtctgctggagcggtgcttgctcattgaggcccagccagccactcctgag
gaactgcagctggtccatagtcaagaatatgtggacttgatggcatccacaccccagatg
actgaaagcgaacgtcgggccctctcagacacctatgattctgtctacctgcatccgaac
tcattcccttgtgccctcctggctactggggcgctgcttcggctggtggatgctctgatg
acaggcgagatccgaaatgggctagctgttgtcaggccccctggacaccatgcccagcga
gagagcatgaacggctactgcatgttcaacaacattgccatagctgcccgctatgcccaa
gaaaggcaccatgtagcacggatactcattgtggattgggatgttcaccacggtcaaggc
acccagttcatctttgagcaggaccccagtgtcctttgcttctccgttcaccgctatgag
ctgggccgattctggccccatctagaagcatctgactggcgggcaacaggccacggcaag
ggtcagggatacactgtcaacgtgccttggaaccaggtggggatgagggatggggattac
atcaccgccttcctccatgtgctgctccccattgctctggagtttcagcctcagatggtt
ctggtggccgctggcttcgatgccatgctgggtgaccccaagggagagatggcagccact
ccagggggctttgctcacctcactcacttgctcatgggtctggccaaggggaggctgatt
ctgtctctggagggtggctacaatctgcactcccttgctctgggggtcagtgccactctc
cagaccctcctgggagacccatgtcccatgctggcaacaccgtgcgccccctgccccagt
gccctggcttccttgtcctctaccctggctgctcacagacctttctggaaggtcatacag
aggtttcagtctacctctgaggacaaggaggacgagtacaggggagtgagcctgggccct
cccccaattctcgagtccctggggaaatctttagagcaggccctgtctctgcctccaagc
cgaacaggcttggtgtatgatgagaagatgatggagcatttcaacatgtgggacagccac
cacccagagcggcccgagcgcattgcccaaatcgcccagcaccacatggagctggggctg
acccctcgatgtttcgtgttgcctgcccgctctgctacaaaccaggagctgctggcttgc
cacagtgaggagtacattgagcgtattcgggccacgagcgggctgaaacctcgggaccta
caccgtgagggcaccagttacaactccatctatatctccccccactccttctgctgcgcc
cagcttgctgccggagctgcctgccgtttggtggaggccatcttggctagggaggtgcag
aatgggctggccattgtccgcccaccaggccaccatgctgaaagagatgctgcctgcggt
ttctgcttcttcaactctgtggcggtggctgctcggcacgctcaggaggtggcaggccgg
gccctcagaatcctgattgtggactgggacattcaccatggcaatggaacccagcacata
tttgaagaggaccccagtgtgctgtacgtgtccctgcaccgctatgatcatggtgccttc
ttccccatggctgaggacggtgctagcagccatgtgggccgaggccagggagagggcttc
aatgtcaatgtggcatggaatgggccccgccttggagatcctgactatctcaccgccatg
caccatattgtgatgcccatcgcctacgagttcaaccctgagctggtgctggtatctgct
ggctttgatgctgctcggggggacccactagggggctgcctggtttccccagagggctat
gcccatatgactcacctgctgatgggactggctggtggccgcattgccctggtccttgag
ggtggctacaacctgacctccatctcagaatccatggctgcttgcacccggacccttcta
ggtgacccacccccactgatgccctggcttcggcctccgctgcctggaaccttcctctca
ctggctgaggttgcccacatccaccagaagtattggcaaagcttgcggcttaatgcagta
gagacagaagcggaggtggaagaaaaggagataccaccagagccagcaaaggagagtacc
ccggggcagaagcttcctgaccagaggccctcaaaggctttggccataggaccagagcta
gagaaacagcccctgtcacctgggcttgacgagaccttgggcctggagtcccttcaactc
agcacgtgtgctccagaggagctggaggctgagccctccattgccaaagaaaagcacccc
gaggatcctggcctcctcggggaggcagctggtggagggggccaggctgctgccacattg
ctgaatgtcctaggggaccaatctgaggatgagggggccacattctatgctgtgaccccg
ctaccctggtgcccacacctggtgactgtgcgcccagtgcctgaggggggcctggatgtg
acccagccatgccagggctgtgacacccatgtggagaactggctctgcctgtcttgctat
caggttcattgtggccgctatgtgggagctcacatgctgcagcatcatgaggcctcgggc
caccccctggtcctaagctatgctgacctctcagcctggtgttacatctgccaggcctac
gtgaaccatgaggttctgctggaggccaagaaaacagcgtaccaggccaagtttggggag
gagatgccaacgttcccgagacaggactga
DBGET
integrated database retrieval system
