Monodelphis domestica (gray short-tailed opossum): 100019129
Help
Entry
100019129 CDS
T01031
Symbol
TPR
Name
(RefSeq) translocated promoter region, nuclear basket protein
KO
K09291
nucleoprotein TPR
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03013
Nucleocytoplasmic transport
mdo05014
Amyotrophic lateral sclerosis
mdo05200
Pathways in cancer
mdo05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100019129 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100019129 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
100019129 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100019129 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100019129 (TPR)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100019129 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
AAA_13
Ntox1
Motif
Other DBs
NCBI-GeneID:
100019129
NCBI-ProteinID:
XP_001367142
Ensembl:
ENSMODG00000011641
LinkDB
All DBs
Position
2:complement(81825719..81918854)
Genome browser
AA seq
2454 aa
AA seq
DB search
MPSSGSLTRSTRRRRPMTSRSLSEKGSRLLGAGRGLTRSRRASLRESGARVSVAREDSAS
APAQAPTPASLSLPSAPDPVFPPGDPDSGNMAAVLQQVLERQELTKLPKPVQAKLEKFLA
DQQSEIDCLKGRHEKFKVESEQQYFEVEKRLSQCQERLVNEGRECQTLRQELERLCQQLK
SVTEKNKELETAQDRYVTVQSQLTRANEELEAEKRDLVRTSERRSQELEYLTEDVKRLNE
KLKESIASKGELQLKLDELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLA
VGREKGNEILELKCNLENKKEEVVRMEEQLNGLKTSNENLQKHVEDLLTKLKEAKEQQAS
MEEKFHNELNAHIKLSNLYKSAADDSEAKSNELTRAVDELHKLLKETGEANKGIQDHLME
VEESKAQMEKEMLEKIGKLERELENANDLLSASKRKGAILSEEELAAMSPTAAAVAKIVK
PGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKA
VASLSVKLEQAMKEIQRLQEDTDKANKHSSVLERDNQRMEIQVKDLSQQIRVLLMELEEA
RGNHVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQE
TTSSRISELQIQLESALTELEQLRESRHHQMQLVDSIVRQRDMYRILLSQATGVVIPLQA
SSLEDVSLMSTPKHPSGVSQAISTPTPISTVESTEAIEARAALKQLQEIFENYKKEKAEN
DKIQNEQSEKLQEQITDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQERNQKL
TATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQ
RGQNLLLTNLQTIQGILERSETETKQRLNNQIEKLEREIAQLKKKLENEVEQRHTLTRNQ
DVQLLDTKRQLETEINRHLNTKELLKNAQKEIVTLKQQLSNIEAQLASQSAQRALGKGQS
TTKEDIDDLISQLRQAEEQINDLKERLKTTSSNVEQYRAMVLSLEESLNKEKQVTEEVRK
NVEARLKDSAEYQAQLEKKLMEAEKEKQELQDEKRRALESMEHQLSELKKTLTSVQNEVQ
EALQRASTALSNEQQARRDCQEQAKIAIEAQNKYERELMLHAADVEALQAAKEQVSKNLL
VRQQLEEMAQKAESQLLECKASWEERERMLKDEASKSASRCEDLEKQNRLLHDQIEKLSD
KVVTSMKEDVQGSSNVSLNEEGKSQEQVLEILRFIRREKEIAETRFEVAQVESLRYRQRV
ELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVIETNKMLREEKERLEQ
ELQQMQAKVRKLELDILPLQESNAELSEKSGMLQAEKKLLEEDIKRWKARNQHLASQQKE
PDLEECRKLLSEKEVNTKRIQQLTEETGRLKAEIARSNASLTTSQNLIQNLREELNKMRT
EKESLQKDLEAKVTDIQEKVKTITQVKKIGRRYKTQYEELKAQHDKVMETSQSVGEPLEQ
QMSVHEVQELKETLNQAEIKTKSLENQIENLHKTVSEKESEVRNLQEQITQLQSELSRLH
QDLQDRTTQEEQLRQHMTEKEDKTRKALVAAKAKLAHLAGVKDQLTKENEELKQRNGALD
QQKDELDVRMTALKSQYEGRISRLERELREQQERHLEQRDEPQETTSKVPEQQRQITLKT
TPASGERGIASTSDPPTANIKPTPVVSTPSKVTAAAIAGNKSTPRASIRPMVTPATVTNP
TTTPTATVMPTTQVESQEAMQSEGPVDHVPVFGSTSGSVRSTSPNVQPSISQPILTVQQQ
TQATAFVQPTQQSHPQIEPASQELSPSIVEVVQSSPIERPSTSTAVFGTVSATPSSSLPK
RAREEEDDSTIETSEQTSEETIEMPLPKKLKSIPPVGPEEEVTAEESTDGEVETLVNQDS
QDSIGEGVTQGDYTPMEDSEETSQSLQIDLGPLQSDQQNPASGQDTQSKGDDVIVIDSDD
EDDDDDENDGEQEDYEEDEDDDDDDDDEDTGMGDEGEDSNEGTGSADGNDGYEADDAEGG
DATDPGTETEESTGGESNQRAADSQNGGEGGSIITESSLPHENSREQQPSSASERQGPRA
PQSPRRPPHPLPPRLTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDE
DRTVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGG
LGMYETPLFLAHEEESGGRSVPTTPLQVAAPVTVFTESTTADASEHASQSVPMVTTSTGS
LSTTTETGAGDDGDEVFVETESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSS
SSADTSSNQPKPFRRVRLQPQTLRTGVRGRQFNRQRGVTHAMGGRGGLNRGNIN
NT seq
7365 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctctctgactaggagcactcgaagacgacggcccatgacgtcccga
agcctcagcgagaagggctcccggctcctaggagcgggacgcgggttgactaggtcgcga
cgagctagcctccgggaatcgggtgcgcgcgtgagcgtagcgcgggaggattcggcctcc
gcgccggcccaggctccaaccccagcctccctgtccttgccttctgccccggacccagtt
ttccctcctggagacccggacagtggcaacatggcggctgtgctgcagcaagtcctggag
cggcaagagctgaccaaactgcccaagcctgtccaggcaaaattggagaagtttctagca
gaccaacagagtgagatcgactgcctgaaggggcgacatgagaagttcaaggtggagagc
gaacaacaatactttgaggtagagaagcgcttgtctcagtgtcaggagagactggtaaat
gaaggccgagaatgccaaactttacgtcaagaactggaaagactttgtcaacaattgaag
tcagtgactgagaaaaacaaagaactggaaactgctcaagatcgctatgtcactgttcag
agccagcttacaagagcaaatgaggaattagaagctgagaaaagagatttggtcagaacc
agtgagagacgatcacaagaacttgaatatttaactgaggatgttaaacgcctaaatgaa
aaactcaaggaaagcattgcatcaaagggagagctccagttaaagctagatgaacttcaa
gcatctgatgtttctgttaagtatcgagagaaacgattggagcaagaaaaggaattacta
cataatcaaaacacatggctgaatacagaactaaaaaccaaaactgatgaactcttagct
gttggtagagaaaaaggaaatgaaatcctagaacttaaatgtaatcttgagaacaaaaaa
gaagaggttgtcaggatggaagaacaattgaatggcctgaaaacatcaaatgaaaatcta
caaaaacatgttgaagatcttctgaccaaattgaaagaggccaaggagcagcaagctagc
atggaagaaaagttccacaatgagctaaatgctcacataaagctctccaatttgtataag
agtgctgctgatgactctgaagcaaaaagcaatgagctaactcgagcagtagatgaactt
cacaagcttttgaaagaaactggagaagctaataaaggaatacaagatcatttaatggaa
gtggaagaatctaaagcccaaatggaaaaagaaatgctagagaagattggcaaattagag
agagaactagaaaatgctaatgacctgctttcagcctcaaaacgtaaaggagccatatta
tctgaagaggagcttgcagctatgtctcctactgcagcagctgtagcgaaaatagtgaag
cctggaatgaaactaactgagttgtacaatgcatatgtagaaacacaagatcagttgctc
ttagagaaactagagaacaagagaattaataaatatctagatgaaatagtaaaagaagtg
gaagcaaaagcaccaattctgaaacgtcaacgtgaagaatatgaacgtgcccaaaaagct
gtggcaagtttatctgttaagcttgagcaagcaatgaaggaaattcaacgattacaagag
gacactgataaagctaacaaacattcatctgtgcttgaaagagacaaccaaagaatggaa
atacaagtgaaagatctttcacaacaaattagagttctcttgatggaacttgaagaagca
aggggtaatcatgtaattcgtgatgaagaagtgagttctgctgacattagtagttcatct
gaagtaatatcacagcatctagtctcctataggaatattgaagaactccagcaacagaac
cagcgccttctggtagcacttagggagcttggggagacaagagaaagagaagaacaagaa
acaacttcttcaagaatttctgagctacaaattcagcttgagagtgctctcactgaatta
gaacaacttcgtgaatcccgacaccatcagatgcagcttgttgattctatagtccgtcaa
cgtgacatgtatcgcattttgttgtcacaggcaacaggagttgtcattccattgcaagct
tcaagcttagaggatgtttcccttatgtccacaccaaaacatccttcaggtgtgtcacag
gcaatctctactcctactccaatttctacagttgagtcaacagaggcaatagaagccagg
gctgcacttaaacagttgcaggaaatctttgaaaactacaaaaaagaaaaggcagaaaat
gataaaattcaaaatgagcaatctgagaaacttcaagagcaaattacagatttacggtcg
cagaataccaagatttccacccaattagattttgcttcaaaacgttacgagatgctacaa
gataatgtggagggataccgtcgagaaattacatccttacaagaaaggaatcaaaaactc
actgcaacaactcaaaagcaggaacagatcatcaatacaatgacacaggacttgagagga
gcaaatgaaaagttggcagttgcagaagtaagagcagaaaatctgaaaaaggaaaaggaa
atgttgaaattgtcagaagttcgcctctctcagcagcgagaatctttgttagctgagcaa
agaggacaaaatttattactaactaatctgcaaacaattcagggaatacttgagagatct
gaaacagaaactaaacagagacttaataaccagatagaaaaacttgaacgtgagatagct
caactaaagaagaagttagaaaatgaagtagaacaaagacacacacttacaagaaatcaa
gatgttcagcttttagataccaagagacagctggagactgaaataaaccgtcaccttaat
acaaaagaactgttaaaaaatgctcagaaagaaatagttacattgaaacagcagctcagt
aatattgaagcccagcttgcttcccagtcagcacagagagctcttggaaaaggccagtct
actactaaagaagacattgatgaccttataagtcagttaaggcaagctgaagagcagatt
aatgacctgaaggaaagactcaagacaacttctagtaatgtggaacaatatcgagctatg
gttcttagcttagaagaatctctaaacaaggaaaaacaggtgacagaagaggtacgtaag
aatgttgaagctcgtttgaaagattcagctgagtatcaggcacagctggaaaagaaacta
atggaagcagagaaggaaaaacaagaacttcaagatgaaaagcgcagagcacttgagagt
atggagcatcagttgtctgaattaaagaagactctcactagtgttcaaaatgaagttcaa
gaagctcttcagagagcaagcacagctttgagtaatgaacagcaagccagacgggattgt
caggaacaagctaaaatagcaatagaagctcagaataaatatgaacgggaactgatgcta
catgctgctgatgtggaagctttgcaggctgccaaagaacaagtttccaaaaacttatta
gtgcgtcagcaattggaagaaatggctcagaaagcagaatcacagttgttggaatgtaaa
gcctcttgggaggaaagagagagaatgttaaaggatgaagcttccaagagtgcctctcgc
tgtgaagatttagaaaaacaaaatagattacttcatgatcagattgaaaaattaagtgac
aaggttgtgacctctatgaaagaagatgttcagggttcatcaaatgtctctctaaatgaa
gaaggcaaatcccaagaacaagtcttagaaattctcaggtttatacgacgagaaaaagag
attgcagaaacgaggtttgaagtagcccaggtagaaagcttgcgttacagacaacgggta
gagctcctagaaagagagcttcaagagctgcaagatagtctaaatgctgagagagaaaaa
gtccaggtaactgcaaaaacaatggctcagcatgaagaactgatgaagaaaactgaaaca
atgaatgtagttatagaaaccaataagatgctgagggaagaaaaagagagactggaacaa
gaactacagcagatgcaagcaaaggttaggaaactggagttagatatcttaccattacaa
gaatcaaatgccgaactcagtgagaaaagtggtatgttgcaagcagagaagaaattgcta
gaagaagatatcaaacgctggaaagcacgtaatcagcatcttgcaagccagcaaaaagag
ccagatttggaagaatgtcgaaagctcctttcagagaaggaagtaaatactaagcgcatt
cagcaattgactgaagaaactggaagactgaaagctgaaattgcaagatcaaatgcatct
ttgaccaccagccaaaacttaatccagaacctaagggaagaattaaataaaatgagaact
gaaaaagaatctctccaaaaggacttagaagccaaagtaactgatatacaagaaaaagtc
aaaactattactcaagtcaagaaaattggacgtagatataagactcaatatgaagaactt
aaggcacaacatgataaggtaatggaaacctctcagtctgttggagaacctctagaacag
cagatgtctgttcatgaagtgcaagagcttaaagaaactctgaaccaagctgaaataaag
acaaaatctctagagaatcaaatagagaaccttcacaagacagtatctgagaaagaatct
gaagttagaaatcttcaggaacagataacacagcttcaatctgagctctcacgtcttcat
caagaccttcaagacagaactacccaggaggagcagctgcggcaacatatgactgagaag
gaggataaaacaagaaaggctcttgttgcagcaaaagcaaagctggcacatttagctggg
gtcaaagatcaacttactaaagaaaatgaagagcttaaacaaaggaatggtgcattagat
caacagaaggatgaattggatgtacggatgactgctcttaaatcacagtatgaaggtcga
attagccgcttggaaagagaactcagggaacaacaagaaagacaccttgagcaaagagac
gagccccaggaaaccactagcaaggtccctgaacaacaaagacagatcacactcaaaact
actccagcttcaggtgaaagaggaattgctagtacatcagatccaccaacagccaatatc
aagcccactcctgttgtgtctactccaagcaaagtgacagctgctgccatagctgggaat
aaatcaacacctagagctagtatccgaccaatggttacccctgccacagttacaaatcca
accactactccaacagctacagtgatgccgacaactcaggtggagtctcaagaagctatg
caatcggaaggacctgtagatcatgttccagtttttggaagcacaagtgggtctgttcgt
tctactagccccaatgtccagccctctatctctcagcccattttaactgttcagcaacaa
acccaagctacagcctttgtgcaacccactcaacaaagtcatcctcaaattgagcctgct
agccaagaactctcccctagtattgtagaagttgtacaaagttcaccaattgaaagacct
tccacttcaactgcagtatttggtacagtttcagctaccccaagttcgtctttgcctaag
cgtgcccgtgaagaggaagatgatagcaccatagagacatcagagcaaacctctgaagaa
acaatagaaatgcctctcccaaagaaattgaaaagtataccacctgtaggacctgaggag
gaagttacggcagaggaaagcactgatggggaggttgagacgcttgtaaatcaggattca
caagattctattggagaaggagtcactcagggagattatactcctatggaggacagtgaa
gaaacctctcagtctcttcaaattgatcttggaccccttcagtcagatcagcagaatcca
gcctctggccaggatacccagtccaaaggagatgatgtcattgtgattgacagtgatgat
gaagatgatgatgacgatgaaaatgatggtgaacaagaggattatgaggaagatgaggat
gatgatgatgatgatgatgatgaagacacagggatgggagatgaaggtgaagatagtaat
gaaggcactggtagtgcagatggtaatgatggctatgaagctgatgatgccgagggtggt
gatgctactgatccaggtactgaaacagaagaaagtacaggaggtgaaagtaaccagaga
gctgcagattctcagaatggtggtgaaggaggttccattattacagagtcatctcttccc
catgaaaattctagagaacaacagccttcatcagcttctgaaagacaaggtcctcgagca
cctcaatcaccccgaagaccaccccatccacttcccccacgactgaccatccatgcacct
cctcaggaattgggaccaccagtccagagaatccagatgacacgaagacagtcagtggga
cgagggcttcaactaactcctgggataggtggtatgcagcagcacttttttgatgatgag
gacagaactgtgccaagtaccccaactcttgtggtaccacatcgtacagatggatttgca
gaagcaattcattcacctcaggttgctggtgtacctaggttccggtttggcccccctgaa
gatatgccacaaacaagttctagccactcagatcttggtcagcttgcatctcaaggaggt
ttaggtatgtatgaaacaccccttttcctagcacatgaagaagagtctggtggcagaagc
gttcctactactcccttacaagttgcagctccagtgactgtatttactgaaagtaccact
gctgatgcttctgagcacgcctctcagtctgttccaatggtgacaacatccactggtagt
ttatccacaactacagaaacaggggcaggtgatgacggagatgaagtatttgtggagaca
gaatctgaaggaattagttcggaagccggcctagaaattgatagtcagcaagaagaagag
cctgttcaggcatctgatgagtcagatcttccttctaccagccaagatcctccttccagc
tcctctgcagataccagcagtaatcaacctaagcctttcagacgagttaggcttcagcct
cagactttgagaacaggggtccggggtcgtcagtttaaccgacagagaggtgtaacccat
gcaatgggaggcagaggaggactaaacagaggaaacattaattaa
DBGET
integrated database retrieval system
