Monodelphis domestica (gray short-tailed opossum): 100019524
Help
Entry
100019524 CDS
T01031
Symbol
TRPC1
Name
(RefSeq) transient receptor potential cation channel subfamily C member 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04360
Axon guidance
mdo04724
Glutamatergic synapse
mdo04726
Serotonergic synapse
mdo04929
GnRH secretion
mdo04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100019524 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
100019524 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
100019524 (TRPC1)
04726 Serotonergic synapse
100019524 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
100019524 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdo04040
]
100019524 (TRPC1)
Ion channels [BR:
mdo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100019524 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Dsc3_C
MTR4-like_stalk
Motif
Other DBs
NCBI-GeneID:
100019524
NCBI-ProteinID:
XP_001372348
Ensembl:
ENSMODG00000021239
LinkDB
All DBs
Position
7:complement(217262521..217320581)
Genome browser
AA seq
733 aa
AA seq
DB search
MVKKLLEENSAGDMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSTDALLVAIDSE
VVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQ
DVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELS
ADLKELSLVEVEFRNDYEELAQQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGLL
EERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLTVGIFW
PVLSLCYLIAPKSQVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALE
RIDYLLIIWLIGMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFH
DSADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFL
GMFLLVLFSFTIGLTQLYDKGYTGSQEPKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFS
LAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEW
KFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYLLSSLSKWVCSHTSKGKVKRQNSLKEW
RNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLG
FRTSKYAMFYPRN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaaagctcttggaggaaaacagtgcaggtgacatgaacataaattgcgtagat
gttcttgggaggaatgccgttaccataactattgaaaatgaaaacttggatattctacag
cttcttttggactacggttgtcagtccacagatgcacttttggtggctatcgactctgaa
gtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatcaagaccaact
atagtaaaactaatggagcgaattcagaaccctgagtattcaacaacaatggatgttgct
ccagtcattttagctgctcatcgtaacaactatgaaattcttacaatgcttttaaaacag
gatgtatctctacccaaacctcatgcagtgggttgtgaatgtacactgtgctctgcaaaa
aacaagaaggacagtctaagacattccaggtttcgacttgatatctatcgttgcctagcc
agtccagccctaatcatgttaactgaagaagacccaattctaagagcatttgagcttagt
gcagacttaaaagagctcagtcttgtggaggtggaattcaggaatgattatgaagaatta
gctcagcaatgtaaaatgtttgccaaagatttgcttgcacaggcacggaattcacgtgag
ctggaagtcatcctaaaccatacatctagtgatgaacctttggataaacggggattgctg
gaagaaagaatgaatttaagtcgtctaaaacttgctattaaatataaccaaaaggagttt
gtctctcagtctaactgtcagcagttcctcaatacagtttggtttggacagatggcaggt
taccggcgtaaacacacctgtaagaagatattgacagttctgacagttggcatcttttgg
ccagttttgtcactctgttatttgatagctcccaaatctcaagttggtcgaataatccac
actccttttatgaagtttattattcacggagcttcatattttacattcttgttgttgctt
aacttatactctttggtctacaatgaggataagaaaaataccatggggccagcccttgaa
aggatagactatcttcttattatatggctaattggaatggtgtggtcagatgttaaaaga
ctctggtatgatggattggaagactttttagaagaatctcgtaatcaactcagttttgtc
atgaattccctttatttggcaacctttgccctcaaagttgttgctcataacaagtttcat
gattcagctgaccgaaaggattgggacgcgtttcatcctacattagtagcagaaggtctt
tttgcctttgctaatgttctgagttacctccgtctcttttttatgtatacaacaagctcc
atcttggggccattacagatttcaatgggacaaatgttgcaagactttggaaaatttctt
gggatgttccttcttgtcttgttttccttcacaattggactgacccaactatatgacaaa
ggctatacaggttctcaagaaccgaaggactgtgcaggaatcttctgtgaacagcaaagc
aatgacacattccattcgttcattggcacttgctttgctttgttctggtatattttttct
ttagcacatgtagcaatctttgtcacaagatttagctacggtgaagaattgcagtctttt
gttggagctgttattgttggtacatacaatgttgtggttgttatcgttcttaccaaattg
ttagtggctatgcttcacaaaagctttcagttgatagcaaaccatgaggacaaagaatgg
aaatttgcccgtgctaagttgtggcttagctactttgatgacaaatgtacactacctcca
cctttcaatatcattccttctcccaaaaccatttgctatctactaagtagtcttagtaag
tgggtttgctctcatacatcaaagggcaaggtcaaacggcaaaacagtttaaaggaatgg
agaaacctgaaacaaaaaagagatgaaaactaccaaaaagtgatgtgttgcttagtccac
cgttatttaacatccatgagacagaagatgcaaagtacagatcaagcaactgtagaaaat
ctcaatgaacttcgccaagatctatcaaaattccgaaatgaaataagggacttacttggc
tttcggacttctaaatatgcaatgttttacccaagaaattaa
DBGET
integrated database retrieval system
