Monodelphis domestica (gray short-tailed opossum): 100019703
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Entry
100019703 CDS
T01031
Symbol
SMG9
Name
(RefSeq) SMG9, nonsense mediated mRNA decay factor
KO
K18735
protein SMG9
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100019703 (SMG9)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100019703 (SMG9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
DUF6079_1st
AAA_30
Motif
Other DBs
NCBI-GeneID:
100019703
NCBI-ProteinID:
XP_003341087
Ensembl:
ENSMODG00000020832
LinkDB
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Position
4:378388008..378399486
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AA seq
530 aa
AA seq
DB search
MEGSAMSESGHSQPGLYGLERRRRWKEPGSGGPQNLSGPGGRERDYGAPWERDRERRVSG
AGVALALLGLEPSGHSDPNLPPLQSKLPPPPTPAPTAPPAPAPLDKPIVLMKPREESKGP
ASGAGAPVPEGATPPPPVTPTPPKGEKEGQRPTQPVYQIQNRGMGATTPAAMDPVVGQAK
LLPPERMKHSIKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPE
EDQRAYVFRAQSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLP
PEYNLPHTYVEMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHE
ASSSSGSDEGTEYYPHLVFLQNKARREDFCPQKLRQMHLVIDQLMAHSHLRYKGTLSMLQ
CNVFPGLPPDFLDSEVNLFLVPFMDAEGDSESLPRAGPGSSPLFSLLPGYRGHPSFQSLV
TKLRSQVMSMARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcagtgccatgtcagagtctgggcacagccagccaggtctctatgggctagag
aggcggcgccgatggaaggaaccaggctccggtggcccccagaatctatctggcccaggg
ggtcgagaaagagactatggagcaccttgggaacgagatcgagagagacgggtgagtgga
gcgggagtggccttggcattgttggggctggagccaagcggccacagtgaccccaacctt
cctcctctgcagtctaaactgccacccccgccaaccccggcgcccactgcacccccagcc
ccagctccactggacaaacccattgtcctcatgaagcctcgagaagaaagcaagggcccg
gccagcggggcaggtgccccagtccctgaaggggccacaccaccacccccagtgacccct
acacctcccaagggggagaaggagggccagcggcctacccagcccgtctaccagatccag
aaccggggcatgggtgccacaacccccgccgccatggacccggtggtgggccaggccaag
ctgcttcccccggaacgcatgaagcacagcatcaagctggtggacgaccagatgaactgg
tgcgacagcgccatcgagtacctgctggaccagacggatgtgctggtggtgggcgtcctg
gggctccagggaacgggcaagtcgatggtcatgtccctgctgtcggccaacactcccgag
gaggaccagagagcgtacgtgttccgggcccagagtgccgagatgaaggagcgtggaggc
aaccagaccagcggcatcgacttcttcatcacccaggagcgcatcgtcttcctggacacc
cagcccatcctgagtccatccatcctggaccacctgatcaacaacgaccgcaagctgccc
cccgagtacaacctgccccacacctacgtggagatgcagtccctgcagatcgcggccttc
ctcttcacggtctgccatgtggttattgtagtgcaggactggttcactgacctcagcctg
taccggttcctgcagacagcagaaatggtgaagccttccaccccgtcccccagccatgag
gccagcagctcctcgggctcagatgaaggcacggagtactacccccatctagttttcctt
cagaacaaggcccggcgagaggacttctgcccccagaagctgcggcagatgcacctggtg
atcgaccagctgatggcccactcccacctgcgctacaagggcacgctgtccatgctgcag
tgcaacgtcttcccagggctgccccccgacttcctggactcggaggtgaacctcttcctg
gtgcccttcatggatgccgaaggcgacagtgagagcctgccccgcgcaggcccaggctcc
agcccactcttttccctcctcccgggctaccgaggccaccccagcttccagtccctggtg
accaaactgcgaagccaggtgatgtccatggcccggccgcagctctcgcacaccatcctc
acggaaaagaactggttccactacgctgcccggatctgggacggggtcaagaagtcctcg
gccctggctgagtacagccgcctgctggcatga
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