Monodelphis domestica (gray short-tailed opossum): 100019855
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Entry
100019855 CDS
T01031
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03022
Basal transcription factors
mdo03420
Nucleotide excision repair
mdo05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100019855 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
100019855 (GTF2H1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100019855 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100019855 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100019855 (GTF2H1)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100019855 (GTF2H1)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100019855 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
100019855
NCBI-ProteinID:
XP_007497073
Ensembl:
ENSMODG00000006540
UniProt:
F7BVJ4
LinkDB
All DBs
Position
5:complement(242708565..242744779)
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAIKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSMNTVDSPAASNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKMDEKGLKTMVSLGVKNPLLDLTALEDKSLDEGYGVSPVPSTSNSSKSIKENS
NAAIIKRFNHHSAMVLAAGLRKQEAQHDHNENNSTDGNSRDSDFFQPPVKRVKLQESIEY
EDLGKNNNIKTIALSLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIKQEMETYTPKLTQ
VLSSGAASSTITALSPGGALMQGGPQQAINQMVPSDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVRMKNNLERFQATKLCPFQEKIRRQYLSTNLISHIEEMLQTAYNKLHTWQ
SRRLLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatcagaagaagttttactgattgtaaagaaggtacgtcaaaagaagcag
gatggagccctgtacctcatggcagaaaggatcgcttgggcacctgaaggcaaagacaga
tttacaatcagccatatgtatgcggacattaaatgccagaaaatcagtccagaaggaaaa
gctaaaatccagcttcagctggtgctacatgcaggagacactactaatttccatttttcc
aatgaaagcacagctataaaggagcgagatgctgtgaaagatcttcttcagcagttgcta
cccaaattcaagaggaaagccaataaagaactggaagagaaaaacagaatgctgcaagag
gatcctgttttgtttcagctttataaagacctggtggtgagtcaggtgatcagtgctgag
gaattttgggccaatcgtttaagcatgaatactgtggatagccctgcagcatccaatcac
aagcaagatgtgggcatttctgcagcatttctggctgatgtccgccctcagacagatggc
tgtaatggcctaaggtataatttaacctctgatatcattgagtccatatttaggacctac
ccagcagtaaaaatgaaatatgcagaaaatgttccacataacatgacagaaaaagagttc
tggacaagattttttcaatcccattattttcatagggatcgacttaacacagggtcaaaa
gatctctttgcagaatgtgccaaaatggatgaaaagggtttaaaaacaatggtatctcta
ggagtgaaaaaccccctactagatttgacagcactggaggataaatcattagatgagggc
tatggagtttcccctgtgccatctacttccaactcttcgaaatccataaaggagaacagc
aatgccgcaatcatcaagagatttaaccatcatagtgccatggtcctggcagcaggtctc
aggaaacaagaagcacaacatgatcacaatgagaacaacagcacagatgggaattctcgg
gattcagacttctttcagccaccagtcaaaagggtgaagttacaggaatccattgaatat
gaagacttggggaaaaataacaacataaaaactattgcactaagcctaaagaagtcagat
aggtattatcacggtccaacaccaattcagtccctccagtatgcaacaagtcaggatatt
atcaattcttttcagagtattaagcaagagatggaaacttacacacccaaactaactcag
gttctttcaagtggtgctgcaagtagtaccatcacggccctatcccctggaggagcactt
atgcagggaggaccacagcaagccataaaccagatggtgccaagtgacattcagtcagaa
ctcaaacacttgtatgtggctgtgggagagctgctgaggcatttctggtcctgttttcca
gttaacacaccattcctagaagaaaaggtagtaaggatgaagaataatttggaacgattc
caagctactaagctctgcccattccaagaaaaaattcggagacagtatttaagcacaaat
ttgataagtcacatagaagagatgttgcagacagcctacaataaactccacacatggcag
tccaggcgcttgctaaagaagacgtga
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