KEGG   Monodelphis domestica (gray short-tailed opossum): 100019863
Entry
100019863         CDS       T01031                                 
Symbol
LSM7
Name
(RefSeq) LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03018  RNA degradation
mdo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100019863 (LSM7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100019863 (LSM7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdo03019]
    100019863 (LSM7)
   03041 Spliceosome [BR:mdo03041]
    100019863 (LSM7)
Messenger RNA biogenesis [BR:mdo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100019863 (LSM7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100019863 (LSM7)
Spliceosome [BR:mdo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100019863 (LSM7)
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 100019863
NCBI-ProteinID: XP_001372576
Ensembl: ENSMODG00000004722
UniProt: F6Y2R1
LinkDB
Position
3:complement(455203916..455212987)
AA seq 103 aa
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq 312 nt   +upstreamnt  +downstreamnt
atggcggataaggagaagaagaagaaggagagcatcttggacctgtccaagtacatcgac
aagaccatccgcgtgaagttccagggaggccgcgaggccagtggaatcctaaaaggattt
gaccctctgctcaatttggtacttgatggcaccattgaatatatgagagatcctgatgac
cagtacaagctcactgaagacacacgccagctaggcttagtggtgtgcagagggacctct
gtggtgctgatttgccctcaggatggcatggaggccattccaaaccctttcatccagcag
caggacggatag

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