Monodelphis domestica (gray short-tailed opossum): 100019877
Help
Entry
100019877 CDS
T01031
Symbol
UPF3B
Name
(RefSeq) UPF3 regulator of nonsense transcripts homolog B (yeast)
KO
K14328
regulator of nonsense transcripts 3
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03013
Nucleocytoplasmic transport
mdo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100019877 (UPF3B)
03015 mRNA surveillance pathway
100019877 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100019877 (UPF3B)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100019877 (UPF3B)
mRNA cycle factors
P-body specific factors
100019877 (UPF3B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
100019877
NCBI-ProteinID:
XP_007507213
LinkDB
All DBs
Position
X:complement(28218202..28238284)
Genome browser
AA seq
557 aa
AA seq
DB search
MLGPVVLRERGGANQQAPRTAPDRTPSPAGTRVSSGFHWKCRRSPRRRRRSQLASASAST
PAPAPASAPAPASASAPVSASAPAPAPAAASAGGAAAAAGATASASYAGSGDSAKAQDRK
AERFKDKKEMLSKVIIRRLPPTLTKEQLEEHLQPLPEHDYFEFFANDSSLYPHMFSRAYI
NFKNQEDIVLFRDRFDGYVFVDHKGQEYPAIVEFAPFQKSAKKKNKKKDAKTGTIEDDPE
YKKFLESYCAEEEKLTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQRMREEKREERR
RREIERKRQREEERRKWKEEERRKRKDTDKIKKIERGPEKERDRSKDEPKIKLLKKPERG
DEKELEKREKSKRLDKEILNEEKPSGQSSTAVKRSDGETKEEKAKKSEDEGGKDHRERDK
DYERDKERERQQRDKEKLRRQEEDRRRQKERFEKEKTFRRKEEEMKKERDLLRDKGKRND
GTDLIGNSDRMTREERKEDVSKRDRIRNKDRPAMQLYQPGARSRNRLGPYEDSSLKSAEP
APDKKQENENNSRKEEE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtcctgtagttctccgcgaaaggggcggcgctaaccagcaggcgccaagaacc
gccccggaccgcaccccgagcccggcggggactcgggtttctagcgggtttcattggaaa
tgccggcggtcaccgcggcggcggcggcggtcacagttggcctcggcctcggcctcaacc
cccgccccggccccggcttcggccccggccccggcttcggcctcggccccggtctcggcc
tcggccccggccccggccccagcggccgcgtctgcagggggggcggcagcggcagccggg
gcgaccgcgagcgccagctacgcgggatcgggggacagcgctaaggcccaggacagaaag
gccgagagattcaaagacaagaaggagatgctgagcaaggtgatcattcgtaggttgcct
cctactctgaccaaggaacagctggaagaacatcttcaacctctgcctgaacatgattat
tttgagttctttgcaaatgattctagtctgtatccccatatgttttctagagcatacatc
aactttaaaaaccaggaggatattgttttgttccgggatcgctttgatggttatgttttc
gtggatcataaaggtcaagagtaccctgccatagtggaatttgctccttttcaaaaatca
gcaaaaaagaagaataagaagaaagatgccaaaacggggactattgaggatgaccctgag
tacaagaaatttttggagagctactgtgctgaggaagagaaactgacgtctactcctgag
actctcttagaagaaatcgaagcaagaaataaagagctgatagccaagaagacaactccc
cttttgaacttcttgaaaaataagcagaggatgagagaagaaaagagagaagagagacgg
cggagagagatcgagagaaaaaggcagagagaagaagaaaggagaaaatggaaggaagaa
gagagaagaaaaagaaaggatacagacaagataaagaagattgaaagaggtccagaaaaa
gagagggatagatcaaaggatgaaccaaagattaagctgctcaagaagccagaaagagga
gatgaaaaagaattggaaaaaagggaaaaatccaagagattggacaaagagattctgaat
gaggaaaaacccagtggccagagtagtacggccgtcaagcgttctgatggggagacgaaa
gaagaaaaagccaagaaatctgaagatgagggtggcaaagaccacagggagagggacaag
gactatgaaagagacaaggagcgagagaggcagcagcgagacaaggagaaactgaggcgg
caggaagaagacagaaggagacaaaaggagcgctttgagaaggagaagacctttagaaga
aaagaggaagaaatgaaaaaggaaagagatctacttagggacaaaggaaagaggaatgat
ggtacagatttaataggcaactcagacagaatgaccagagaggaaagaaaagaagatgtg
tccaaaagagatcgcataagaaacaaggaccgcccagcaatgcaactctaccagccaggt
gcccggagccggaatcgcctgggaccctatgaagacagctctttgaaatctgcagagcca
gctccagataaaaagcaagagaatgagaacaatagtaggaaagaagaggaatga
DBGET
integrated database retrieval system
