Monodelphis domestica (gray short-tailed opossum): 100020137
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Entry
100020137 CDS
T01031
Symbol
RORB
Name
(RefSeq) RAR related orphan receptor B
KO
K08533
RAR-related orphan receptor beta
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
100020137 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100020137 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mdo03310
]
100020137 (RORB)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100020137 (RORB)
Nuclear receptors [BR:
mdo03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100020137 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100020137
NCBI-ProteinID:
XP_007498611
Ensembl:
ENSMODG00000002046
UniProt:
F6QC71
LinkDB
All DBs
Position
6:complement(89446935..89674379)
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AA seq
458 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQNGEAEALAR
VYSSSISNGLNNLNNETGGTYSNGHVIDLPKSEGYYNVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKTREALWQQCAVQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKVGPQVPLCSVRK
MRDHLLWCQKSILNSYPSNEKLRHIRDNGKNTGSRVQI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataagtcctctggaatc
cactacggagttatcacatgtgaaggctgcaagggattctttcgaaggagccagcagaac
aatgcttcttactcctgcccaaggcagagaaactgtttaattgacagaacgaacagaaac
cgatgccaacattgccggctgcagaagtgtcttgccctaggaatgtctcgagatgctgtc
aaattcgggaggatgtccaagaagcagagggacagcctgtacgcagaagtacagaagcat
cagcaacggcttcaggaacagaggcagcagcagaatggggaggcagaggcccttgccagg
gtctacagcagcagcatcagcaatggcctgaacaacctgaataacgagacaggaggcacc
tactccaatgggcatgtcattgacctgccaaagtccgagggttattataacgtggattca
ggccagccatccccagatcagtcaggactggacatgactggaatcaaacagataaagcaa
gaacctatctatgacctcacttctgtacccaacttgtttacctatagctctttcaacaat
gggcagttagcaccagggataaccatgactgaaatagatcgaattgcacagaacatcatt
aagtcccatttggagacgtgtcaatacaccatggaggaactacaccagctagcctggcag
actcacacgtatgaagaaattaaggcatatcagagcaagaccagagaggcattgtggcaa
cagtgtgctgttcagatcactcacgcaatccaatacgtggtggagtttgcgaagaggatc
acaggtttcatggagctctgtcaaaatgatcagattctcctcctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgtcgtgccttcaacccattaaacaacactgttctgttt
gaaggaaagtatggaggaatgcaaatgttcaaagccttaggttctgatgacctggtgaat
gaagcatttgactttgcaaagaatttatgttccctgcagcttaccgaggaagagattgcc
ttgttctcatctgctgtgctaatatctccagaccgagcctggctgatagaacctcggaag
gtccagaagcttcaggagaagatttattttgcgcttcagcatgtgattcagaagaatcac
ctcgacgatgagactttggcaaaggtaggtccacaggtccctctttgttcggtaagaaag
atgagagaccacttactgtggtgtcagaagagcattctcaacagttacccaagtaatgaa
aagctacgacacattagagacaatggaaagaacactggttccagagttcaaatctag
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