Monodelphis domestica (gray short-tailed opossum): 100020218
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Entry
100020218 CDS
T01031
Symbol
SEC16A
Name
(RefSeq) SEC16 homolog A, endoplasmic reticulum export factor
KO
K20353
COPII coat assembly protein SEC16
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100020218 (SEC16A)
Membrane trafficking [BR:
mdo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100020218 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
100020218
NCBI-ProteinID:
XP_007475367
Ensembl:
ENSMODG00000017583
LinkDB
All DBs
Position
1:465323331..465374559
Genome browser
AA seq
2426 aa
AA seq
DB search
MMQPPPQTVPSGTGGPPPVGGPRNMYWSNSPYSRRANAPMTAVGGPVQPVTDPFAFGRQT
PQGTALGNPSKGNSLVMQGPSQPMFSQPPGMHVPHNHAGDNSQGLYTSLSGPVSQPEVNT
DSFTNVLAPVAMPGHVMNSSAEIHPTVEPGIQTSSVPSHYNPGAGENSFGGHLQCGVPLP
GRPLSRQDPNGGTPAPTTSFFPQPHQQTPVQWRPVQGSPQSSIQNYSPYTEPPSQNAVPL
ASGSSHFFPQANMHQVPGHQQHVPFVSTSGPLVSEKSETVPSQSGNYTANNFQPENMFRQ
NLGVNSSWLSQEFRQNLVGSKQHLPDPTLVNPIAQGNSLENQPQHRTEAVTSHVPPELNS
GTITMFFKGEEAENEENLSSEKADTAVKSDFDGFPSNSGHGGHHLPHPMQIGASAPFQAS
VPKGSANESSQQGLEAQQYFSQSTSNQHDKQTTKNCDIYVNDDKACTVKTCGAIGSQYEN
VENLECIQNQEVPPSEPPNLNPSSSNDQFRYGPLPGQSVSKHSIVSYAEGGPNLEAPDSI
PHPVRSDSVSSNYSSISHRSISSSTRPQESVGTFIQQEVGKPNEEASGSFFKQIDSSPLV
GETNDNNINKSYHSNLSQPPTPSPPKPTGIFQTSANSSFEPVRSHGVGVKPIEADRANVV
GELRENHSKQNNSKPTVTVPAASPGNLEQPPDNMETIFTPRAHPLPLTTTDEGVNMLSHV
GGTLLENVPLASEKRPSRAQGATKKCESPATTLWAQNELPNFGGNVLLAPAAPALYVPAK
SSEIIQPPDEGQPCKPGSIPLHSSPDGNVSSENLENPPKMGEEEALQSQASSGYASLLSS
PPTESLQNQPILIAQPNQSYNLTQPINFSVSLSNQLSHNENNHSCKDSGVGDKSAPSSQP
LCAGVPRESVPLSGTQAASPVNSPLPTTNHSHSNFSQGPGTTSEMVPNQSPNLLVQPPSH
QMPLNLVPECQKNQNSESFPSEYTTKPVVNLSASPGTNLPSGNTGVMLVPPVNNTLIPHV
NKTNLTNYQEETSGALDFTLNRTLENHSTDNSVRIHNTSHSSGPTFSQQAITNHTSQSGP
ELHDKEHFYQQVTKDVQQQIVLDKSQPGALPPQQQGSSAAQVPKTASDSSNSGIQPDSFP
SGNSPQLPSQGKVDQPQLSQSSSVSTTSVHSGQPASQQEQQWPPSQTPQNAFGPPSNLST
YYYYRHLYDTYQPQYPPPYPSDPRTASLYYPEDAYGPYDPRYRHYDNSAAYAENYRYAEP
DRPSSRASHCSDRPSSRQGYPEGYYTSKGGWSSHSDYYANYYSGQYDYGDANRWERYQYD
PRFRDPRSYDRRYWYDTEHDHYRKEAYPYSDRPEKYDDHWRYDPRFTGSFDDEPEPHRDA
YDDDRRSIHSEHSAHSLHSTHSLQSRQSSFSSRSHQSQVYRNNDVTANSYERPAPPGSLH
GEYSYGVYGNNFNGAQGFTDYGYSAETGWPTSEQVPSRPTTPEKFSVPHVCARFGPGGHL
IKVLPNLPSEGQPALVEIHSMETMLQHTSDQEEMRSFPGPLAKDDTHKVDVINFAQNKAT
ECLRNENLIDKESASLLWDFIVLLCRQNGTVVGTDIAELLLRDHKTVWLPGKSPNEANLI
DFTNEAVEQVEEEESGEAQLSFLTDSLMTTIDSLEKETERFRELLLYGRKKDALESAMKH
GLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGD
WRPHLAMVLSNLNNNMDVESRTIATMGDTLASKGLLDAAHFCYLMAQIGFGVYTKKTTKL
VLIGSNHSLPFLKFATNEAIHRTEAYEYAQSLGTQPCFLPNFQVFKFIYACRLAEMGLAA
QAFHYCEVISKTILKQPRQYSPVLINQLIQIASQLRLFDPQIKEKPEQESFIEPTWLIQL
QQLKRQIEEGDVIWNQDRATPHQYPSTPSSELEQYDGTGHGQEIGPGTDNPLLASLLPNT
EQSNQSIRLMPSAPQTILENSGSMPASFQSEKPDNVPFYPVPPGSVGHVPVYGPPLSVPG
FSDQYGPEHGAVYPGSNVSPGGQPLQVTDQLPEDSRIQDTGRVPQESSIKNSLSEQREED
FGGKFANLASGRRSRTTSQSSAHMEYSRKCPNTESYKGRERSNSAGQQPSPSPTFASEVK
RPTKEVKKESKEPKKSGESWFSRWIHGKKKTEAHLPDDTNKSIVWDGKKQRWVNLDEPEE
ENKPPPPPPTSFPKLPQVAAPSGPGGPPNASVNMFSRKAAGTRARYVDVLNPSGTKQSGP
VPAPSDLFAPLAPLPIPSNLFVPNSEEQPLENSGLEEQLPDAYQPDLEPTTEPQLLNSAT
LPPGSELAASNMDGHQSGELSRCSSMSSLSREVSQHFNQPPSLPPSGGPPVGTVPFYNPS
QFAQPPAVTGSSRLGRIGQRKYPTLK
NT seq
7281 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagccaccacctcagactgttccttctgggacaggtggaccacctcctgtagga
ggtcctcgaaatatgtattggtctaacagtccatatagcaggcgggctaatgcaccaatg
actgctgtaggtggcccagtgcaacctgtaacagatcctttcgcatttggccgacagact
ccacaaggaacggcattaggcaatccgtccaaaggcaactcacttgttatgcaaggtcct
tcccaaccaatgttttctcagccacctggtatgcatgtacctcataaccatgcaggggat
aattcacaaggactttatacatctttgtctgggcctgtatcacaacctgaagtaaatact
gattcgtttacaaatgtattggctcctgttgcaatgcctggacatgttatgaatagtagt
gctgaaattcatccaactgtagaacctggaattcagacttcatctgttccttcacattat
aatcctggagcaggtgaaaattcttttgggggacatcttcagtgtggtgtgcctctgcct
ggtaggccactaagcaggcaagatccaaatggtggcactccggcaccaactacatcattc
tttcctcaacctcatcagcaaaccccagttcaatggagaccagttcaaggaagtccacag
tcttcaattcagaattattcaccatataccgaaccaccttctcagaatgcagttcctctt
gcttctggtagttctcatttttttcctcaagcaaatatgcatcaagttcctggacatcag
caacatgtcccatttgtgtctacatcaggacctttggttagtgaaaagagtgagacagtc
ccttctcagagtggcaactacacagcaaataactttcagcctgaaaatatgtttaggcaa
aatctaggagtgaatagtagttggcttagtcaggagtttagacagaatctagtaggaagt
aaacagcatttaccagaccctactctagttaatcccattgctcagggaaatagcttagaa
aaccaaccacagcatagaactgaggctgtaaccagtcatgtacccccagaattaaattca
ggaactatcacaatgtttttcaagggagaagaggcagaaaatgaggaaaatctttcatca
gaaaaagcagacactgctgttaagtctgactttgatggctttccatcgaattctggacat
ggaggccatcaccttcctcatcctatgcagattggagcaagtgccccttttcaggcatca
gttcctaaaggttcagctaatgaatcttctcagcagggactagaggcccagcaatacttt
tcacagtctacaagtaaccaacatgataaacaaaccactaaaaactgtgatatttatgtt
aatgatgacaaagcatgtactgttaaaacttgtggtgccattggctcacagtatgaaaat
gttgagaacttagagtgcattcaaaatcaagaagttccaccaagtgaacccccaaatttg
aatccttcctcttcaaatgatcagttcagatatgggccactcccagggcagtcagtttca
aagcacagtattgtaagttatgctgaaggagggccaaatctagaggcacccgattcaata
cctcacccagtccgatctgatagtgtatcctccaactatagtagtataagtcataggagt
atatctagttcaacaagaccccaagaatcagtgggcacgtttattcagcaagaggttggg
aagcctaatgaggaagcttcaggtagtttttttaagcagattgattcttctcctttggta
ggggagacaaatgataacaatataaataagagttaccatagcaatctctcccagcctcca
actccaagtcctcccaaacctacaggaatatttcagacaagtgcaaatagttcttttgaa
cctgtaaggtcccatggagttggagtaaaacctattgaggcagacagagcaaatgtggtg
ggtgaactaagagagaaccattccaagcagaacaatagtaaaccaactgttacagtacca
gctgcctcaccaggtaatctggaacaacctccagacaacatggaaacaatttttacccct
cgtgcacatcctttgcctcttacaacaactgatgaaggtgttaatatgctttcccatgtt
ggtggaacgcttttggaaaatgtgcccttggcatctgaaaaacgcccctcaagggctcaa
ggtgccactaaaaagtgtgagagccctgcaactactttgtgggcccagaatgaactacca
aactttggaggaaatgttctccttgcaccagctgcccctgcactttatgtacctgctaaa
tcttctgaaattattcaacctccagatgagggacagccatgtaaaccaggctctattcct
ctacattcctccccggatggcaatgtttcctctgaaaaccttgagaaccctcccaaaatg
ggagaagaggaggcccttcagtctcaggcaagttctggttatgcaagtttattatcctca
ccacccactgaatctttacagaatcaaccaatcttgattgcccagcctaatcaaagctat
aatttgacccaacccattaatttttctgtgtctttgtctaatcaattaagtcataatgaa
aataatcattcttgcaaagattctggagtgggggacaagtctgccccaagcagtcagcct
ctatgtgctggtgtacctagggaaagtgttcccttgtccgggactcaagctgcatctcct
gttaattcaccattacctactaccaatcattcccatagtaatttttcacaaggtcctggt
accacttctgaaatggttcctaatcagtctcccaacttattagttcaaccaccatctcac
cagatgccacttaacttggttccagaatgtcaaaaaaatcagaattcagaaagttttcct
tctgaatacactactaaaccagtggttaatttgtctgcttctcctgggactaatcttcct
tctggaaacactggtgtaatgttagttccaccagtgaacaacaccctaataccccatgtt
aataaaacaaatctcaccaattatcaggaagaaacttctggagcacttgactttacactg
aaccggactttggaaaatcacagtacagacaattctgtgcgaatacataatacatcacat
tctagtggtccaacattttctcaacaagccatcactaatcataccagtcagtctgggcct
gaattgcatgataaagaacatttttaccaacaggtaacaaaagatgtacagcagcagatt
gtccttgataaatcccagccaggggccctacctcctcagcaacaagggtcatcagctgct
caggttcccaagacagcatcagattcttcaaactctggaattcagcctgattccttccca
tctggaaattcaccccaactgccaagccagggtaaggtagaccagccgcagctctcacaa
tcatctagtgtttcaacaacctcagttcactctggccaaccagctagtcagcaagagcag
cagtggccaccatcacagactcctcagaatgcttttggtccaccttcgaacctctcaact
tattactattataggcatctttatgatacctatcaacctcagtatccaccaccctatcct
tcagatcctagaacagcttccctttattacccggaggatgcctatggcccatatgaccct
cgttatagacattatgataatagtgctgcttatgctgaaaactatcgatatgctgagcca
gaccgtccaagttctagagctagtcactgctcagatcgaccatcttccagacaggggtat
cctgaaggatattatacttccaaaggtggatggagcagtcacagtgattactatgcaaat
tattactctggccagtatgattatggagatgcaaatcgctgggaacgatatcaatatgat
cccaggtttagagaccccaggagctatgaccgaaggtattggtatgatactgaacatgat
cattataggaaagaagcatatccttatagtgacagacctgaaaaatatgatgatcattgg
aggtatgaccctcgttttactggaagttttgatgatgaaccagaacctcatagagatgct
tatgatgatgataggcgtagtatccacagtgagcattctgcccatagccttcatagtacc
catagtctacagagccgtcagagtagcttcagctcacgttctcatcaaagccaagtctat
agaaacaatgatgtgactgctaattcatatgaacgcccagctccaccaggctcccttcat
ggagagtattcctatggtgtttatggaaataatttcaatggtgcacaaggttttacagat
tatggctactctgcagaaacaggatggccaacttcagaacaagttccttcaagaccaact
acacctgaaaaattttcagtgcctcatgtctgtgcaaggtttggccctggaggccatctt
attaaagtgcttccaaacttgccttctgaaggacagccagctttggttgagatacacagc
atggagactatgttgcagcatacttctgatcaagaagagatgagatcctttcctggacct
cttgctaaagatgatacccataaagtggatgttattaattttgcacagaataaagctaca
gaatgtttgcggaatgaaaatctaattgataaagagtctgcaagtctcctttgggatttc
attgtactgttatgcagacagaatggaactgttgtgggaacagatattgcagagctcttg
ttacgcgatcacaaaacagtgtggcttcctggaaagtcacctaatgaggcaaacttgatt
gattttactaatgaggctgtggaacaagtggaagaagaggagtctggtgaggctcagctc
tcatttctaactgacagtttgatgacgactatagacagtcttgaaaaagagactgagagg
tttagagagctgcttctttatgggcgaaaaaaggatgctttggaatctgctatgaaacat
ggtttatggggacatgctctgttacttgctagtaaaatggacagccgaacacatgcaaga
gttatgaccaggtttgccaacagccttccaattaatgatcctttacaaactgtttaccag
cttatgtctggaagaatgccagctgcatccacatgttgtggagatgagaaatggggagat
tggaggccacatcttgctatggttttgtccaacttgaataataatatggatgttgagtca
aggacaattgccaccatgggtgatactcttgcttctaaaggtctcttagatgctgcacac
ttttgttacctgatggcccagattggatttggggtctacactaagaaaactacaaaactt
gttctaattggatcaaatcacagtttgccatttttaaaatttgcaaccaatgaagctatt
cacagaacagaagcttatgaatatgcacagtcactgggaactcagccatgcttcttgcct
aatttccaggtattcaagttcatctatgcttgtcgactggctgaaatgggactcgctgca
caagcctttcattactgtgaagtcatttccaaaaccattctcaaacaaccacgccagtat
tcaccagtgctgattaaccagctcattcagatagcctcccagttacgactcttcgatcct
cagataaaagagaaaccagaacaagaatcatttattgaacctacttggttaatacagctt
cagcaattgaaaaggcaaatagaggagggtgatgtaatttggaatcaggacagagcaact
ccacatcagtacccaagtacacctagctctgaactggagcaatatgatggcacaggacat
ggtcaagaaattggcccaggaactgacaatccattattagcatcattgttgcctaataca
gagcagtctaaccaaagcattcgccttatgccctctgctcctcagaccatccttgaaaat
tcaggcagtatgcctgcttccttccaatcagaaaaacctgacaatgtaccattctatcca
gtgcctcctggatctgttgggcatgtccctgtatacgggccaccactgtctgtacctggg
ttttcagatcagtatggtcctgagcatggagctgtgtatccaggatctaatgtatcgcca
ggtgggcaacctctccaggtgacagatcaactacctgaagactctaggatccaggacaca
ggaagagtgccacaagaatcatccattaagaactctctttcagaacaaagagaagaggat
tttggtgggaaatttgccaatttggcatcaggacgaagatccagaactacctcccagtct
tcagcacacatggagtattccagaaaatgtccaaatactgaatcctataaaggacgagag
cgttctaattctgctgggcagcagccttctccttctccaacttttgcttctgaagtaaag
agaccaaccaaagaagtcaaaaaagagtccaaggaacctaaaaagagtggcgagtcttgg
ttttctcgctggatacatgggaaaaaaaagacagaagctcatctgccagatgacacaaac
aaatcaattgtatgggatggaaagaaacagcgctgggtgaatttagatgagccagaagaa
gagaacaagccaccacctccacctccaacatcatttcctaagcttcctcaggttgctgct
ccttctggtcctggtggcccccctaatgcctctgttaatatgttttccagaaaagcagca
ggaacaagagctcgttatgttgatgttttaaatccaagtggaacaaaacaaagtggacct
gttcctgcaccctctgatttatttgccccactagcaccacttcctattccttcaaacttg
tttgtacccaattcagaggagcagcctttggaaaacagtggtctagaggagcagttacca
gatgcataccaacctgatttagagcctactactgaaccacagttgttaaattctgccaca
ttgccacctggttctgaacttgcagcttcaaatatggatggtcaccaatcaggagagctt
tcgcgctgtagttcaatgagttcattatcacgtgaagtaagccagcattttaatcagcct
cccagtctgccaccatcaggaggacctccagtgggaactgtaccattttataacccatct
caatttgcacaaccacctgctgtcactggaagttccaggctgggaagaattggtcagaga
aaatacccaacactgaagtag
DBGET
integrated database retrieval system
