Monodelphis domestica (gray short-tailed opossum): 100020367
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Entry
100020367 CDS
T01031
Symbol
CIC
Name
(RefSeq) capicua transcriptional repressor
KO
K20225
capicua transcriptional repressor
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100020367 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100020367 (CIC)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100020367 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100020367
NCBI-ProteinID:
XP_016282747
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Position
Un
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AA seq
1008 aa
AA seq
DB search
MYSAPRPLPAPGAAVPRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQ
PASHSVSSSQSKEPAESAAIAHEQPPSGAVGPESGRPPGATCPESPAPGPPQAPGVSEGS
KIPPQHSEEEGPGPTGESRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKE
RDSSSEXDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA
LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSDTKPVALGLTGGPKEMRERSM
SETGTAAAPGVSSELLSAAAQTLLGPEAKAPTSGPGAVERLHPAGPGPSRPRAFSHSGVH
GLDGGESDSQALQELTQMVSGPAPYVGPKPPPQYGGPGPFATPGEGGTLAGGRPPMLPAR
PSRSQRTASEDMTSDEERMVICEEEGDDDVIGEEGSESGPGLPLPSAAAWLPLRASPPSM
CPGTTPWCSVFSPEPWHLRLLASLVSGPPPAPVGSKRVRERPPKGSAGPLSGRAPAPAHR
QFLFGLPKRMMGFGTADIDLKVVPSRKCQGEAGPRAPGGSPLGIGLVYADKKQAAPTASH
LVAGPLLGVGKAPAAVTNLLVGAPGYSTSASPAVQFIAQGPTGGSGPTAATGPPAGSGPN
GPVPLGILQPTPLGKPGGITQVQYILPTLPQQLQVAPAPAAPGPKAAAVGGSGPTTSIRF
ALPPGTATNGKVLAPATPAPGIPILQPVPSAAPPKAQSVSPVQAQPSAGTAQLLPGKVLV
PLAAPSVAVRGGGAGQPLPLVSPPFSVPVQNGAQPSSKIIQLTPVPVTTPGSLVPPLSPA
ALPSPASQSQKVILPSSTRITYVQSASGHSLPLGASPSSSQNAAPGPPAPYGPASSVALG
FTTIGPSGPAIVQPLISGQAPLLAPGQVGVSPVPSPQLPPACAGGPVITAFYPGGPGGPS
AMPLPQPAPFDSNNREASLRCPPTPLIDCNLFTCGFSPDLLSEAQVGW
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggccccccggccactacccgcgcccggcgccgccgtcccccgcggcctcggc
atgttcgtgtggacaaatgtggagccacgatcagtggccgtatttccctggcattcgctt
gtcccattcctggcacccagccagcctgacccttctgttcaacccagtgaggcccagcag
ccagccagccactctgtttcttccagtcagagcaaagagcctgcagagtcagcagcaata
gcccatgagcagccccccagtggggcagtggggccagaatctggacggccacctggggcc
acctgccctgagagcccagcccctggccctccacaggcccccggggtctctgaaggcagc
aagattccacctcagcattctgaggaggaaggccctgggccgactggggaaagtcggctg
gacagcgagacagagagtgaccacgatgatgcgttcctctctatcatgtccccggagatc
cagttgcctctcccaccaggaaagcgccggacgcagtccctcagcgccttgcccaaggaa
agggactcctcttctgagnaggatgggcgaagccccaacaagcgggagaaagaccacatc
cgacggcccatgaatgccttcatgatcttcagcaagcggcaccgggccctggtgcaccag
cgccacccaaaccaggacaaccggactgtcagcaagatcctgggcgagtggtggtacgcg
ctggggcccaaggagaagcagaagtaccatgatctggcttttcaggtgaaggaggcccac
ttcaaggcccacccggactggaaatggtgcaacaaggaccgaaagaagtcgagctccgac
accaagccggtggccctggggctgacgggaggccccaaggagatgcgagagcgcagcatg
tcagagactggcacagcagccgcccctggagtctcctcggagttactgtctgcggcggcc
caaaccctgctgggcccagaggccaaggcccctacgtctggccctggggcggtggaacgg
ctgcacccggctgggcccggccccagcaggccacgggctttctcccacagcggtgtgcac
ggcttggacgggggggagtcggacagccaggcgctgcaggaactcacccagatggtgtcg
gggccggccccctatgtggggcccaagcctccgcctcagtatgggggcccgggacccttt
gccactcctggcgagggcgggaccctggcgggcgggaggcccccgatgctgccggcgaga
ccatcccgctcccagcgcacggccagcgaagacatgaccagtgacgaggagaggatggtc
atctgtgaagaggagggagatgatgatgtcataggtgaggagggctcggagtccggcccg
ggcctgccactgccctcggcagcagcctggcttccccttcgtgcctcgcccccttccatg
tgcccaggcaccacgccctggtgctcagtcttctctcccgagccctggcacctgcgtctg
ctggccagcctggtgtcaggacctcccccagcccctgtggggagcaagcgggtcagagag
aggcctcccaaggggtcggcgggacctctctctgggcgggcgccagccccagctcacagg
cagtttctcttcgggctccccaagcggatgatgggctttggcaccgctgacatcgacctc
aaggtggtccccagcagaaagtgccaaggggaggcagggccccgggccccagggggctca
ccacttggtatcggtctggtctatgctgacaaaaagcaggcggcccccacggcctcacac
ctggtggcagggcctcttctgggggtgggcaaggcccccgctgctgtgaccaaccttctc
gtgggggccccgggctacagcacctcggcctccccagctgtgcagttcattgctcaaggt
cctactggtggaagcgggccgacagctgcgactgggccccctgctggcagtggccccaat
ggccctgtgcccctgggcatcctgcagcccacccctctgggcaagcctgggggcatcacc
caggtgcagtacattttgcccaccctcccgcagcagctgcaggtggccccagccccggcg
gcacccggccccaaagctgcagccgttggggggtcgggccccaccaccagtatccgcttt
gccctaccgccgggaactgctaccaatgggaaggtcctggcaccagctaccccggccccc
gggatccccatcctgcagcctgtcccctctgctgcaccccctaaagcccagtcggtgtct
ccagtgcaggcccagccctctgcgggcactgcccaactgctgcctgggaaggtcctggtg
cccctggcagcgcctagcgtggcagtgcgaggcggaggggctggccagcctctgcccctg
gtgagcccgcccttctccgttccagtgcagaatggagcccagccatccagcaaaatcatc
cagctcaccccggtgccggtgaccacccccggcagcctggtgcccccgctcagcccggcc
gccctgcccagccccgcgtcgcagtctcagaaggtcatcctgccctcttccaccagaatc
acctacgtgcagtcggcttctgggcacagtcttcccctgggtgccagcccctcctccagc
cagaatgcggctcccggccccccagccccgtatgggcccgccagctccgtggccctgggt
ttcaccaccatcgggcccagcgggccggccatcgtccagcccctgatctcgggccaagcc
cccctgttggccccaggccaggttggcgtatcccctgtccccagcccccagctgccgccg
gcctgtgctgggggtcccgtcatcacagccttctaccctggcgggccagggggcccctcg
gccatgccccttcctcagccggccccctttgattctaacaatcgcgaagcttcccttcgc
tgcccccccacacccctcattgactgcaatctgtttacgtgcgggttttcacctgactta
ctttccgaggcgcaagttgggtggtag
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