Monodelphis domestica (gray short-tailed opossum): 100020415
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Entry
100020415 CDS
T01031
Symbol
SOX6
Name
(RefSeq) SRY-box 6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100020415 (SOX6)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100020415 (SOX6)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100020415
NCBI-ProteinID:
XP_001366961
Ensembl:
ENSMODG00000007224
UniProt:
A0A5F8GYF9
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Position
5:244875179..245544538
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AA seq
855 aa
AA seq
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MPSSSEVLAGGAGESPAEEWKDHHGFIRMSSKQAASPFACAADGEEAMTQDLSAREKEEG
SDQHVTSHLPLHPIMHNKPHSEELPTLVTTIQQDADWDSVISAQHRMESENTKLCSLYSF
RNTSTSPHKPDDGGRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSC
MEKLLSKDWKEKMERLNASELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQ
KKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIF
PHDQRTLAAAAAAQQGFLFPSGIPYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHASH
PQISPRLKGLSERYGRNLDTFEHGGGQSYNHKKIEQLYAAQLASMQVSPGAKMPSTPQPP
TTAGAVSPTGMKNEKRGTSPVTQVKDEAAQPLNLSARPKTAEPAKSPTSPTQSLFPASKT
SPVNLPNKSGIPSPIGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQRE
QQQQQPHGIDGKLTSMNSTGLNNCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRP
EDAEGSKAVNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASTEPHIKRPMNAFMVWAK
DERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPR
PKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTT
PSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDSGSLAGNEMINGEDEMEMYDDYEDEPKS
DYSSENEGPEAVSAN
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaagttctgaagttctggctggtggggcaggagagagccctgccgaagagtgg
aaggaccaccacggcttcataagaatgtcttccaagcaagccgcctctccatttgcctgt
gcagctgatggagaggaagcgatgacccaggatttgtccgctcgggaaaaggaagagggc
agcgaccagcacgtgacctcccacctgcctcttcaccctatcatgcacaacaaacctcac
tctgaggagctaccaactcttgtcaccaccattcaacaagatgctgactgggacagtgta
atctcagcccagcaccgaatggaatcagagaatactaagttatgttccctctattccttc
cgaaatacctctacctcaccacacaagcctgacgacgggggtcgggaccgagagataatg
actagtgtcacttttggaacgccagagcgccgcaaagggagcttggcagacgtagtggac
accctgaaacagaagaagttggaagagatgacccggactgagcaggaggactcatcctgc
atggaaaaactactttcaaaagactggaaggagaaaatggaaagattaaatgccagtgag
cttcttggagaaattaaaggtacccctgagagtctggcagagaaagaacggcagctctcc
accatgatcacccagctgatcagtttacgggagcagctcctggctgcccacgatgaacag
aaaaagctagcagcctcccagattgagaagcagcggcagcagatggacctagctcgccag
cagcaagagcagattgcgaggcagcagcagcagcttctgcaacagcagcacaaaatcaat
ctcctgcagcagcaaattcaggttcagggtcacatgcctccgctcatgatcccaattttt
ccacacgaccagcggacactggcggcagccgctgctgcccaacagggattcctcttcccc
tctggaataccatacaaaccaggtgataactaccccgtacagttcattccatcaacaatg
gcagctgctgctgcttctggactgagccctttacagcttcagaaagggcatgcctcccac
ccacaaattagcccaagactaaagggcctaagtgaacgttatggcaggaatttggatacc
tttgaacatggtggtggccagtcttacaaccacaaaaagattgagcagctctatgcggcc
cagctggccagtatgcaggtgtcacctggggcaaagatgccatctactccgcagccacca
accacagcaggggcggtctcacctactgggatgaaaaatgaaaagagagggacaagccct
gtaactcaagttaaggatgaagctgcacagccactgaatctctcagccaggcccaagaca
gccgagcctgcaaagtccccaacatctcccacgcagagcctcttcccagccagcaaaacc
agtccggtaaacttgccaaacaaaagtggcattcccagccccattggaggaagcctggga
agaggatcctctttagatatcctgtccagtctcaactcgcctgccctatttggggaccag
gacacggtgatgaaagccattcaagaggctcggaagatgagagaacaaatccagcgggag
cagcagcaacagcagccgcatggcatcgatggcaagctcacctccatgaatagcacgggc
ctgaacaactgcaggaatgaaaaggagagaacacgcttcgagaatctaggcccccagtta
acagggaagtcaaatgaagatgggaaactgggcccaggagtcattgatctgaccaggcct
gaagatgctgagggaagtaaagccgtgaatggctctgcagctaaactacagcagtattat
tgttggccaacaggaggtgccaccgtggctgaagcccgtgtctacagggatgcccggggc
cgggctagcaccgaaccacacatcaagcgaccaatgaatgctttcatggtttgggcaaag
gacgagcggaggaaaatccttcaagccttccctgacatgcacaactccaacattagtaag
attctaggctctcgctggaaatccatgtccaaccaagagaagcaaccgtattatgaagag
caggctcggctaagcaagatccatctagagaagtacccgaattacaagtataaaccccga
ccaaaacgtacctgcattgttgacggcaaaaaactccgcattggagagtacaaacagctg
atgaggtctcggagacaggagatgagacaattcttcactgtagggcaacagcctcagatt
cccatcaccacaggaacgggtgttgtgtatcctggtgctattaccatggcgactaccaca
ccatctcctcagatgacatctgactgctccagcacctcagccagcccggagcccagcctc
cctgtcatccagagcacttatggcatgaagacagacagcggaagcctggcggggaacgaa
atgatcaacggagaggatgagatggaaatgtatgacgactatgaagatgagcccaaatca
gactatagcagtgaaaacgaaggtcccgaagccgtcagtgccaactga
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