Monodelphis domestica (gray short-tailed opossum): 100020416
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Entry
100020416 CDS
T01031
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04820
Cytoskeleton in muscle cells
mdo05169
Epstein-Barr virus infection
mdo05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100020416 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100020416 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100020416 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100020416 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mdo04812
]
100020416 (VIM)
04147 Exosome [BR:
mdo04147
]
100020416 (VIM)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
100020416 (VIM)
Cytoskeleton proteins [BR:
mdo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
100020416 (VIM)
Exosome [BR:
mdo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100020416 (VIM)
Exosomal proteins of other cancer cells
100020416 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
DUF7491
RBD-FIP
TPR_MLP1_2
Sec10_N
DUF4515
CENP-F_leu_zip
LAMB4
Motif
Other DBs
NCBI-GeneID:
100020416
NCBI-ProteinID:
XP_001368237
Ensembl:
ENSMODG00000009818
LinkDB
All DBs
Position
8:complement(256731133..256743242)
Genome browser
AA seq
467 aa
AA seq
DB search
MSNRSVSSSSYRRMFGGSSTGGRPSASRSYVTSTTRYSLGSAIRPSTTRSVYSSSPGAVY
ATRSSAARLRSSAPIPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYID
KVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLA
EDIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHD
EEIQELQAQIQEQHIQIDVDVAKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLS
EAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQ
DTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFS
SLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccgatcggtgtcttcttcctcttaccgcaggatgtttggcggtagcagcacg
ggcgggcggcccagcgccagccgcagctacgtgacctcgaccacccgctacagcctgggc
agtgccatccgcccgagcaccacccgcagcgtgtactcctcttccccgggcgccgtgtac
gccacgcgctcttcggcggcgcgcctgaggagcagcgccccgatcccaggagtgaggctg
ctccaggattccgtggacttctccctggccgacgccatcaacacggagttcaagaatacc
cgcaccaacgagaaggtggagttgcaggagctgaatgaccgcttcgccaactacattgac
aaggtgcgttttctggagcagcagaacaagatcctgctggccgagctagagcagctcaag
ggacagggcaagtcacgcctgggggacctgtatgaggaggagatgcgcgagctgcgccgg
caggtggaccagctcaccaacgacaaagcccgggtggaggtggagagggacaacctggcc
gaggacatcatgcgactccgagagaagttgcaagaggagatgctacagagagaggaagct
gagagcaccttgcaatctttccgacaggatgttgacaacgcttccttagcgcgtctagac
ctggagcgtaaagttgaatccctgcaagaagagattgccttcttgaagaaacttcatgat
gaggaaatccaagaactacaggctcagattcaagagcaacacatccagattgatgtggat
gttgccaagcccgatctcaccgcagccctgcgtgatgtccgtcagcagtatgaaagtgtg
gccgccaaaaaccttcaggaggctgaagagtggtacaagtccaaatttgctgatctctct
gaagctgctaataggaacaatgatgccctgcgccaggctaagcaagaatctaatgaatac
cgacgacaggtgcagtccctcacctgtgaagtggatgcacttaaaggaactaatgaatcc
ctggaacgccagatgcgtgaaatggaggagaactttgctgttgaagctgctaactaccaa
gacactattggtcgcctgcaggatgaaatccagaacatgaaagaagaaatggcccgtcac
ctccgtgaatatcaggatctgctgaatgtcaagatggctcttgatattgagattgctacc
tacaggaaactgctggagggagaggagagcagaattgcgctgcctcttccaaatttttct
tccctgaatctgagagaaaccaaccttgactcactccctttggttgacacccattcaaag
agaacactcctaatcaagactgtggaaactagagatggacaggtcatcaatgaaacttct
caacaccatgatgatctggaataa
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