Monodelphis domestica (gray short-tailed opossum): 100020483
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Entry
100020483 CDS
T01031
Symbol
PRPF39
Name
(RefSeq) pre-mRNA processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdo03041
]
100020483 (PRPF39)
Spliceosome [BR:
mdo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100020483 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
TPR_MalT
TPR_12
TPR_16
Motif
Other DBs
NCBI-GeneID:
100020483
NCBI-ProteinID:
XP_001368787
Ensembl:
ENSMODG00000007393
UniProt:
F6YZN8
LinkDB
All DBs
Position
1:complement(255624963..255663201)
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AA seq
668 aa
AA seq
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MQNSAHVDEYSSSINGNASNDSEVAIEQTTDFSTEIMNVIEMEQSPDGSPNVNEENTEEN
EISNVELPVTDTEAQFPPEYEKFWKAVENNLQDFTGWVYLLQYVEQENHLLAARKAFDKF
FTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPDD
PETNNTVRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTTIYDRILGIPTQLYS
HHFQRFKEHVQNNLPRDLLSSEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAK
LITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLE
FEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLPKKP
MVHMLWAAFEEQQGNINEARSILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEQLLQDA
VKNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGD
LKQNEDNILTCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQILLKEQ
DSLKRKAENGAEEPDEKKVHTEDASLASTQMIDGDIQANQAAYNYSAWYQYNYQNPWNYG
QYYPPPPT
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattctgctcatgtggatgagtacagcagttctataaatggcaatgcaagcaat
gattctgaggtagccatagagcagaccactgatttcagtactgagattatgaatgttata
gaaatggaacagtcacctgatggctctcccaatgtgaatgaagaaaatacagaggaaaat
gaaatttcaaatgtagaactaccagtgacagacactgaagcacaatttcctccagaatat
gaaaagttttggaaagctgtagaaaataatctccaggattttactggctgggtatatttg
ctgcagtatgtagaacaagagaatcacttgctggctgccagaaaagcgtttgacaaattt
tttacacattatccatattgctatggttattggaaaaagtatgcagaccttgaaaagcgc
catgacaacattaaacaatcagatgaggtttatcgacgagggcttcaggcaatacctctt
agtgttgatctttggattcattatataaacttcttaaaagaaactttggacccagatgat
cctgagacaaataatacagtaagaggaacttttgaacatgccgttttagctgcaggaaca
gatttcagatctgatagattatgggaaatgtacataaactgggaaaatgaacagggaaat
ctgagagaggttacaactatatatgatcgtattcttggtattccaacacagttatatagt
catcatttccagaggtttaaagaacatgtacagaataacttgcctcgagatcttttaagt
agtgagcagtttattcagcttcgaagagaactggcttctgtaaatggacacagtggtgat
gatggtccccctggtgatgatttaccatctggaattgaagatataacagaccccgcaaag
ctaatcactgaaatagaaaacatgagacatagaattattgagattcatcaagaaatgttt
aattataatgagcatgaagttagcaaaagatggacctttgaagaaggtattaaaagacct
tatttccatgtgaaaccattggaaaaagcacaactgaaaaattggaaagaatacttagaa
tttgaaattgaaaatgggactcatgaacgtgttgtggttctctttgaaagatgtgtcata
tcatgtgccctctatgaggacttttggattaagtatgccaagtacatggaaaaccatagt
atcgaaggagtgagacatgtctacagcagggcttgtactatacatcttccaaagaaaccc
atggttcacatgctatgggctgcttttgaagaacagcagggtaatattaatgaagcaagg
agcattctgagaacatttgaagaatgtgttttaggattggccatggttcgtttgagaaga
gtaagtttagaacgacggcatggaaacatggaagaagctgagcagttgcttcaggatgct
gttaagaatgccaaatcaaataatgaatcctcattttatgctataaaactagctcgacat
cttttcaagatacagaagaaccttccaaaatcaaggaaagtgctcttggaagccattgag
agagataaagagaacacaaaattatacctcaatttacttgaaatggaatatagtggagac
ctcaaacaaaatgaagacaatattctcacctgttttgacaaggcaatacatggttctttg
cctattaaaatgagaattacattttctcagagaaaagtggagtttctagaagattttggt
tctgatgtgaacaagcttctggatgcttatgatgaacatcaaatactcttaaaggaacaa
gactctttaaaaaggaaagctgaaaatggggcagaagagccagatgaaaaaaaagtacac
acagaagatgcaagtttagcatctactcagatgattgatggagatatccaagctaaccaa
gctgcatataattatagtgcctggtatcaatacaattaccagaatccctggaattatgga
cagtattatcctcccccacctacctga
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