Monodelphis domestica (gray short-tailed opossum): 100020490
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Entry
100020490 CDS
T01031
Symbol
SNAPC4
Name
(RefSeq) small nuclear RNA activating complex polypeptide 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100020490 (SNAPC4)
03021 Transcription machinery [BR:
mdo03021
]
100020490 (SNAPC4)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
100020490 (SNAPC4)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
100020490 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SANT_DAMP1_like
SLIDE
EAD9
Motif
Other DBs
NCBI-GeneID:
100020490
NCBI-ProteinID:
XP_007475372
Ensembl:
ENSMODG00000017566
UniProt:
A0A5F8H3T3
LinkDB
All DBs
Position
1:465450544..465510032
Genome browser
AA seq
1549 aa
AA seq
DB search
MSDMDLVAEREKITKQIKNLEKILDPNIATIEVVVSDSNLDSTSEADSLEDDDWDEHIPM
EEESWGESDEDDSKDQALPKDPETCLQLNMVYQEVLQEKIAEIDLLLAQNKEQQEEVMWD
LAGSKASKTKDGKSLPSNVFVGHFMKPYFKDKVTGIGPPANEDTREKATQGIKSFEELIV
TKWKTWEKTLLRKSVISDHLQRLLQPKLLKLEYLNQKLDKVSDSVEKQILEKQIKNTEKE
IEDINQLPEESLLGDRLDERDWEKISNINFEGSRSADEIRKFWQNCEHPSINKQAWVEEE
TKRLKEIAAKHNYLEWQKIAAELGTNRSAFQCLQMYQQYNKDLKRKEWTKEEDHMLTQLV
EEMRVGNHIPYRKIVYYMEGRDSMQLIYRWTKSLNPNLKKGFWTPEEDAKLLQAVAKYGE
RDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNAKEEEKLIELIEKYGAGHWAKIAS
ELPHRTGSQCLSKWKALIRKKKRPRKRQKSRKKCSSCSSSSSSSSSSEDAQLEWHNDLEK
EKDAEGALDEHQYTVPSIDLWMPTRHSHSEPCKDPGWCYSRPSTISPCLSKASGPSKDGS
QAIPSVAVAKRRDFSQDKDILTPTMDMECTTLSADIGLEKPQEELEEQASKTGKRILKVP
LNDVKKVIRINTCLEYQKLKERLKKTHLFTSSLASKIDNGMAIEKVVQVWHKTFLNRQRQ
QKVGIQRKRLDRKLLMAVTPWVGDIVIPCWSSRKAVTVQTRAEAIMTKLQTIHLTSTPVF
TLFIQLLQIDTDGCMKVIGERKTKQSELLWAITGNPQRPQQASSSLQKTSGCLMMKGVSK
ETQKKSISKMKDLPESTQPGPTVLPTSFGPISKPKTVSELLREKRLRESRARKALESTVI
LAPQVLITPPVILQQSLQPLIPSTLAMTQPLGSGSAGKPVAVASSPVATFQTPSPIIAST
KSPEKSSNTNNSGSSQGNEVIAKEKVNETEGTSAPQVGALISGQSSSMRSEGHSVPSESP
VPAIAANPVPGISQISTSSGPANLLSSQATTASKKQELPNAPVLAPSQVSMQQPKPISLV
PALSVPTCGPQVISSNMFPITWVVTTQGLVPMSMSTFVGLPGPGKPAGTPVLPIVGGVAR
NQSTLKLLPSSIVKQSFRAPQPSPTLAKRPLIASKTLTGELPSGIAGPNLPIQLPTTASL
NTGNHSGKNSLPEDQPSSREVKTAREMSAPLSQPETQPQTKSPTNQPRTEPDGCDCAPTP
EVENPTGVTIGGPDPMQKSLLLETKDHLPAQNGNPGKSFPISTEIPKPITQQQEGLAAQD
SQPKAMEPGKSILDLNLLSLENEASIREWLKGKQGVCLPPLQSTLPYLPPFLCNLKTLSG
LLLQKKSLEQKAVTIVAQGSIQDKNDVSREDVQSARHLVQQQLKENPAYLLLKARFLAAF
ALPAFLATLPPPRVPTTLSQILDRNSGSEEEKEEEEYSQSKTRPKDRDCGEKEQLVSTAG
DTQSTPETVASIQVSPHPDPHAMSSALDAADFNVLKTRNAIHARKRRRV
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacatggatttagttgcagaaagagagaagataacaaaacaaatcaagaatctg
gaaaagattttggatcctaacattgcaacaattgaagtggttgtctctgattcgaatctt
gattctacttcagaagcagattccctggaagatgacgattgggatgaacacattcctatg
gaggaagaaagttggggagaaagcgatgaagatgactcaaaggaccaagcccttcccaaa
gacccagagacctgtttacagttgaacatggtatatcaagaagtccttcaggagaagata
gcagaaattgacttgctgctggctcagaataaagagcaacaggaagaagtcatgtgggat
ctggctggttccaaagcctcaaagacaaaagatggaaagagcctcccttcaaatgtgttt
gtgggtcattttatgaagccatacttcaaggataaggtcacaggaattggacctccagcc
aatgaagatacccgggaaaaggctacacagggcatcaagtcttttgaagaactgattgtg
accaaatggaaaacttgggaaaagactttacttaggaagtcggtgataagtgaccatctg
cagcgattacttcaacccaagttattaaagcttgaatacttaaatcaaaaacttgacaaa
gtcagtgactcagtggagaagcagattttggagaagcaaattaaaaacactgagaaggaa
attgaggatatcaatcagctaccggaagagtctttattgggggacagactggatgaaagg
gattgggagaagatctccaacattaattttgaaggcagccgaagtgctgatgagattcgg
aaattttggcagaattgtgagcacccaagcatcaacaagcaagcatgggttgaggaagag
accaagcgcctgaaagagattgccgcaaagcacaattatttggagtggcagaaaatcgca
gcagagctgggaaccaaccgaagtgccttccagtgtctacaaatgtaccagcagtataac
aaagacttgaagcggaaggaatggacaaaagaagaagaccatatgctcacacaattagtt
gaggaaatgagagttggaaaccatatcccttatcgtaaaattgtctactacatggagggt
agagattcaatgcagttgatctatcgttggaccaagagcctaaatcccaatttgaaaaaa
ggattctggacaccagaagaagatgctaaattactccaagctgttgccaaatatggagaa
cgtgattggtttaaaattcgggaagaggtgccaggtaggagtgatgcccagtgtcgagat
cgatatctaagaagattacatttcagcttaaagaaagggaggtggaatgcaaaggaagaa
gaaaaattaattgaattaatagaaaaatatggtgctggtcactgggcaaagatagcctct
gaattgcctcatcggacaggctcccaatgtttgagcaaatggaaagccttgattaggaaa
aagaaaaggccccgaaaacgtcagaagtctcggaagaaatgcagctcttgttcctccagt
agcagtagcagcagcagcagtgaggatgctcagctggagtggcacaatgacctggagaaa
gagaaagatgctgaaggagcactagatgaacaccagtacacagtgcccagcatagacttg
tggatgcctaccagacacagtcattctgagccatgcaaagatccaggatggtgctattcc
aggccctccactatttccccttgcctttccaaagcatcagggccttccaaagatggcagc
caggcaattccaagtgtagcagtggcaaaaagaagggactttagccaagacaaagacatt
ttgacccccactatggacatggagtgcacaacactttcagctgacattggtctggagaag
ccacaggaagaattagaagagcaggcctccaaaactgggaagcgtatcttaaaagttccc
ctgaatgatgtgaaaaaggtgataaggatcaatacctgtctagaataccagaaactaaaa
gagaggctaaagaagacccatctattcacctcatctctggcatccaaaattgacaatgga
atggctatagagaaagtggtacaggtgtggcacaaaacttttctgaatagacagcggcaa
cagaaggttggcatacagaggaagagactggaccgcaagctcttaatggccgtgactcct
tgggtgggtgatatcgtcatcccttgttggagttccaggaaggctgtaacagtgcagact
cgagcagaagccatcatgacaaagttgcagactatccatctgacaagtacacctgtgttt
acattgtttattcagctgttgcagattgatactgatggctgcatgaaggtgattggagag
aggaagaccaagcagtcagagctgctctgggctattactggaaatccacagcgacctcag
caggcatcctccagtttacagaaaacttcaggctgtctgatgatgaagggagtgagcaaa
gaaacacagaagaaatctatctctaagatgaaagatttgccagagtctacccagcctggg
ccaacagtgttaccaacttctttcggtcccatatcaaagcccaagactgtctcagaactt
ctgagggagaagaggctaagggaatccagagccagaaaggccttggagagcacagtgatc
cttgcccctcaggtgctgatcaccccacctgtgatccttcagcaatctctacaaccactt
atcccttctactcttgctatgacccagccactgggatcagggtcagctgggaaaccagtt
gctgtggcttcaagcccagtagccacatttcaaacaccttcccccatcatagcttccacc
aaatcccctgagaaaagttctaatacaaataactctggctcctcccagggaaatgaggta
attgctaaagagaaagtaaatgaaacagagggtacctctgctccccaggttggggccctc
atctcaggtcagtcctcatcaatgaggtctgaaggacactctgttcctagtgagagccca
gtccctgcaatagcagctaatccagtcccaggaataagccaaatttctaccagctcaggg
ccagctaacctcctgtcttcccaagccactactgcctcaaagaaacaggaattgcccaat
gctcctgttctagctccatctcaagtctctatgcaacagcccaagcccatcagcctggtg
cctgccctttcagttcctacctgtggtccacaggttatctccagcaacatgtttcctatc
acttgggtagttactacacaagggcttgtccctatgtccatgtcaacctttgttggcctt
cctggaccaggcaagccagctggaacccctgtgcttcccattgttgggggagtagccaga
aatcagtctaccctgaagctattgccttcatcaatagttaagcagagctttagggcccct
caaccaagccccactttagccaaaagaccacttattgccagtaaaactcttacaggagaa
ttgccctcaggcatagctggaccaaatcttccaatacagcttcccaccacagcttcatta
aatacaggaaatcactcaggaaaaaatagtcttcctgaagatcaaccttcttccagagaa
gtgaagacagctagagagatgtcagcacccctttcccagcctgagacacagccccagacc
aaaagtcccacaaaccaaccaaggacagagcctgatggctgcgattgtgcacccacccca
gaggtagaaaacccaactggagtgactataggaggcccagatcccatgcagaaaagcctt
ttactggagacaaaagaccatcttcctgctcaaaatggtaatcctggaaaatcatttccc
atttcaacagagatacctaagcccattacccagcaacaagaagggttggctgcccaagac
agtcaacctaaagccatggagcctgggaaaagtattctggacctgaatctcctctcatta
gagaatgaggcttccatacgggagtggcttaaaggaaagcaaggtgtctgcttgccccca
cttcagagtaccctaccctatctgcctccctttctgtgtaatctgaagaccctttcaggg
cttctgctccaaaagaaatctctggagcagaaagcagttaccatagtggcacagggaagt
atccaagacaagaatgatgtatccagagaagatgtacaatcagctcggcatctggtgcaa
cagcagcttaaggagaaccctgcatatctccttctgaaagccagatttttggcagctttt
gccctcccagcttttcttgccactcttcccccacctagggttccaactaccctttcacag
atcttggacagaaacagtgggagtgaggaggaaaaggaggaagaggaatactctcagtca
aagacaagacccaaggacagggattgtggtgaaaaggaacagttagtgagcacagctgga
gatacccaatccaccccagagactgtggcttctatccaggtttctccccatcctgaccca
catgccatgtccagtgcccttgatgctgctgatttcaatgtgctgaagactagaaatgct
atacatgccaggaagcggaggagggtatga
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integrated database retrieval system
