Monodelphis domestica (gray short-tailed opossum): 100020766
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Entry
100020766 CDS
T01031
Symbol
SCN10A
Name
(RefSeq) sodium voltage-gated channel alpha subunit 10
KO
K04842
voltage-gated sodium channel type X alpha
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdo04040
]
100020766 (SCN10A)
Ion channels [BR:
mdo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100020766 (SCN10A)
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Na_trans_cytopl
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
100020766
NCBI-ProteinID:
XP_007500719
Ensembl:
ENSMODG00000013404
LinkDB
All DBs
Position
6:complement(288327507..288438087)
Genome browser
AA seq
1534 aa
AA seq
DB search
MSLHLHSSSDLGFLAGSSLLPLPGSGRLPPFLNINYGPSGNSTKRRYSYGNFTLKSQDGL
DSVFTDDEKISGRENGSRRGSLLLAHMGQRMSTQNQRILSPQSLTPVARQDAKESSNPGE
CNGKASLPGGDPASGNVTSSGATETSGKIDMTSEETKKKNALTAHTLSAEYFDESFRVKR
AMSVVSIITSVLEELEESEQRCPPCWIRFAQKYLIWECWPPWVKFKNLVEYIVKDPFTEL
IVTLCIVTNTLFMSMEHYNMTAAFSFMLQAGNIFFTFIFTAEMVFKIIAFHPYYYFQKSW
NIFDSVIVTLSLVELGLPQKASLSVLRSFRLLRVFKLAKSWPTLNNLIKIIGNSVGALGN
LTLILAIIVFIFAVVGKQLFGDNYDKLRDKNTQQLPRWHMHDFFHSFLVIFRILCGEWIE
TMWDCMEVSGIPLCLIVFLMVMVLGNLVVLNLFIALLLNSFSADNLASEDDGDNNLQKAL
GRIHKFMHFIAQTIRDFWGRSFWISKARKEKQKAVVKMAFSDSGALNHMTAQALPSTGSI
KDKPAPNGLALELASCPVDGPGNLVTNGVMEISVPMAVAESDLEDEEDEDEPSMALEAAP
PKQEVPLQEERRPQENNHHPMSETSSEDLALYLDKQWKDTQSGGSPTEKGDVTSCSEGST
VDIPDPELILKQMTDLSEILEEPEDCFTEGCIRRYPCCDVDTGKSPGSLCWNLRKTCYHI
VEHNWFESFIIFMILLSSGALAFEDVNLEERATVKAILEFADRVFTYIFILEMLLKWVAY
GFQTYFTNAWCWLDFLIVDVSMISLIANTLGYSEIGPIKSLRTLRALRPLRALSRFEGMR
VVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFSGKFGRCINITLENFPPVDVLIVNN
KTQCNEENGAGLFWDTVKVNFNNVGIGYLALLQVATFKGWMDIMYAAVDSRKQEEQPEWE
ANLYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKL
GSKKPQKPIPRPLNKCQGFVFDIVTQQAFDIAIMVLICLNMITMMVETDSQSEVKTKILN
RINHFFVAVFTAECVLKMFALRYYYFINGWNIFDFIVVILSIVSLVFSGIMKSLENYFSP
TLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANF
AYVKEEAGIDDMFNFRTFPNSMLCLFQITTSAGWDGLLSPILNTGYPYCNPDSTNSSKPR
GNCGNPTIGIAFFVSYIIISFLIVINMYIAVILENFNVATEESTEPLSEDDFDMFYETWE
KFDPEATQFISFSALSDFADTLTGPLRIPKPNQNELIQMDLPLVTGDKIHCLDILFAFTK
RVLGESGEMDTLKAQMEEKFMAANPSKDSYEPIATTLRSKQENVSASIIQRAYRKYLLQH
SLRQVTVTCANDVGEPRCERATEDEGLAEFMMNESMELPDKSETASTMSFPPSYDSVTRG
LSEEGQLDTSNTGHVEEDASYDQLSQDLDKASSM
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgtccctccacttgcattcgtcctcagaccttggattcctagcgggcagctccctcctc
cccctcccagggtctggccgactcccgcctttccttaacattaactatggtcccagtggc
aactcaaccaagagaaggtacagctatggaaactttactctcaagagtcaagacggcctc
gactctgtctttactgatgatgagaagatctctggcagggagaatgggagtcgtcgaggg
tctttgcttttggcacacatgggacaacgtatgagtacgcaaaaccaaaggatcctctca
cctcaatctctcacacctgttgccaggcaggatgccaaagagtcaagcaaccctggagaa
tgcaatgggaaagcttctttgcctggtggagaccccgcttctgggaatgtcacatcctca
ggggctactgaaacatctggaaaaatagatatgacttctgaggagaccaagaagaagaat
gcactgacagcccacaccttgtctgcagagtattttgatgaatcattccgagtgaaaagg
gcaatgagtgtagtcagtatcattacttctgtcctcgaggaacttgaagagtcggagcag
aggtgccctccttgctggatccgctttgctcagaagtacctgatttgggaatgctggccg
ccctgggtgaagttcaagaatctggtagagtatatcgtgaaggaccctttcacggagctc
atcgtcacgctgtgcattgtgaccaacacgctgttcatgtccatggagcactacaatatg
accgcagccttttccttcatgctccaagcaggcaatatattcttcacgtttattttcacg
gctgagatggtgttcaagatcattgccttccatccctactattacttccagaagagctgg
aacatctttgacagtgtcatcgtcaccttgagcctggtggagctgggtctgccccagaaa
gcaagcttgtcggtgctccgctccttcagactgctgagggtcttcaagctggccaagtcc
tggccaaccctgaacaatctcattaagatcatcggcaactctgtgggagccttgggcaac
ctcaccctgatcttggccatcatcgtcttcatcttcgccgtggttggaaagcagctcttt
ggagacaactacgataaactccgcgataaaaacacccagcagctgccccgctggcacatg
catgacttcttccactcttttctcgtcatattccgaatcctctgtggggaatggatcgag
accatgtgggactgcatggaagtgtctgggatccctctgtgtctcatcgtcttcttgatg
gtgatggtgctggggaacctggtggtccttaacctgttcattgccttgctgctgaattcc
ttcagtgctgacaacctggcctcggaggacgatggagacaacaacctccagaaagccctg
ggcaggatccacaagttcatgcatttcatagcgcagaccattcgggatttctggggcaga
agtttctggatttccaaggccagaaaggaaaaacagaaggccgtggtgaaaatggccttc
tcggactcaggggccctgaaccacatgaccgcccaggctctccccagcactgggagcatc
aaagataagccagctcccaatgggctggccttggagctggccagctgccctgtcgatggc
cctgggaatcttgtgaccaatggcgtcatggaaatctcagtcccaatggctgtggccgaa
tctgatcttgaagacgaagaggatgaggatgagccaagtatggcattagaagcagcaccc
ccaaaacaggaagtcccccttcaagaagaaagaagaccacaggaaaataaccatcacccc
atgtcggagacctcttccgaagacttggccttgtacctggataaacaatggaaggatacc
caatcaggtggcagccccaccgagaaaggagatgtcacaagttgctctgaaggcagcaca
gtggacatccctgatccggagctcatcctaaagcagatgacggacctcagcgagatctta
gaggagcctgaagattgtttcacggagggctgcattcgtcgctatccatgctgcgatgtg
gacacaggaaagtctcctggatctctctgctggaacctgagaaaaacctgttaccatatt
gtggagcacaactggtttgagagttttatcatcttcatgattctgctgagcagtggggcc
ctggctttcgaagacgttaatctagaggagagggccacagtgaaagccatcctggagttt
gctgaccgcgtgttcacttatatctttatccttgagatgctgctgaaatgggtggcctat
ggcttccagacctatttcactaatgcctggtgctggctggacttcctcatcgtggatgtt
tcgatgataagcctcatagcaaacacacttggctactccgaaattggtcccattaaatcc
ctcaggacactacgagcattgagacctttgagagcactgtcacgatttgaaggcatgagg
gtggtggtagatgccctggttggtgccatcccttccatcatgaatgtccttctggtctgt
cttatcttctggctcatctttagcatcatgggagtgaatctcttttccggaaaatttggc
agatgcatcaacatcaccctagaaaactttcccccagtggatgtgttgatcgtcaataac
aagacccagtgcaatgaagagaacggtgctggcctcttctgggacaccgtgaaggtcaac
tttaacaatgtgggaattggttacctggctcttctgcaggtggcaacattcaaagggtgg
atggacatcatgtatgctgctgtggattctcggaagcaagaggagcagcccgagtgggag
gccaacttgtacatgtacctgtattttgtcatcttcatcatctttgggggcttcttcacc
ctgaatctctttgtcggggtcatcatcgacaacttcaatcaacaaaagaaaaagttaggt
ggtcaagacatttttatgactgaagaacagaagaaatattataatgctatgaaaaaactg
ggctctaagaagcctcagaaaccaatcccaagacctctgaacaaatgccaaggcttcgtg
tttgatattgtaacccagcaagccttcgacatagccatcatggtgctcatctgccttaac
atgatcaccatgatggtggagacagacagccagagtgaggtgaagaccaaaatcctcaac
cggatcaaccatttcttcgtggccgtcttcaccgcagagtgtgtcctgaagatgtttgcc
ctgagatattactatttcatcaacgggtggaacatctttgattttattgttgtgatcctc
tccattgtgagcttggtgttttctggcattatgaagtcacttgaaaattatttctccccg
acgctcttcagagttatccgcctggctcggattggccgcatcctccgactgatccgagca
gccaaggggattcgcacactgctctttgccctcatgatgtccctccctgccctcttcaac
atcggcctgctgctcttcctggtcatgttcatctactccatcttcggcatggccaacttc
gcctacgtgaaggaggaggctgggatcgatgacatgttcaacttccggacattccccaac
agcatgctctgcctcttccagatcaccacgtccgctggctgggatgggctcctcagtccc
atcctcaacactggctacccatactgtaacccagattcaacaaactccagtaagcccaga
ggaaactgtggaaaccccaccatcggaatcgcattctttgtcagttacatcatcatctcc
ttcctcatcgtgatcaacatgtacatcgccgtcatcctggagaacttcaacgtggccacg
gaggagagcacggagcccctgagcgaggacgacttcgacatgttctacgagacctgggag
aagttcgacccggaggccactcagttcatttcattttcagccctttcagactttgcagat
actctgacaggacccctgcgcattccaaaacctaaccagaatgaactcatccagatggac
ctgcctctggtcacaggagacaagatccactgcctggatattttatttgcctttaccaag
agagtcctgggagaatctggggagatggacaccctgaaggcccaaatggaggaaaagttc
atggccgccaatccttctaaagattcctatgaaccaatagcaactactctgagatcaaaa
caggaaaatgtgtctgcgtccatcatccaaagggcctacagaaaatatctcttgcagcat
tccctacgacaagtcactgttacgtgtgcaaatgatgttggtgaacccaggtgtgagagg
gccactgaagatgaaggcttggctgaattcatgatgaatgaaagcatggagcttccagac
aagtcagaaaccgcttcaaccatgtccttccctccatcttatgacagtgtcaccagaggg
ctcagtgaggaaggccagctggatacatccaacactggccacgtggaggaagatgctagc
tatgaccagctatctcaggatttggacaaggcatcatcaatgtag
DBGET
integrated database retrieval system
