Monodelphis domestica (gray short-tailed opossum): 100020775
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Entry
100020775 CDS
T01031
Symbol
VCP
Name
(RefSeq) valosin containing protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04137
Mitophagy - animal
mdo04141
Protein processing in endoplasmic reticulum
mdo05014
Amyotrophic lateral sclerosis
mdo05022
Pathways of neurodegeneration - multiple diseases
mdo05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100020775 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100020775 (VCP)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
100020775 (VCP)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100020775 (VCP)
05022 Pathways of neurodegeneration - multiple diseases
100020775 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100020775 (VCP)
03009 Ribosome biogenesis [BR:
mdo03009
]
100020775 (VCP)
04131 Membrane trafficking [BR:
mdo04131
]
100020775 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdo04147
]
100020775 (VCP)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100020775 (VCP)
Ribosome biogenesis [BR:
mdo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100020775 (VCP)
Membrane trafficking [BR:
mdo04131
]
SNARE
SNARE associated proteins
Others
100020775 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100020775 (VCP)
Exosome [BR:
mdo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100020775 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
100020775
NCBI-ProteinID:
XP_001368198
Ensembl:
ENSMODG00000007809
UniProt:
F6ZIF4
LinkDB
All DBs
Position
6:123685472..123703081
Genome browser
AA seq
806 aa
AA seq
DB search
MASGADSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGSGGNVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggagccgattcaaaagcagatgacttatcaacagccattctcaagcagaag
aaccgccccaatcggttaatcgttgatgaagctattaatgaagacaacagtgtggtgtcc
ctgtctcaggccaagatggatgaattgcagctcttccgaggtgacacagtgctgcttaaa
ggcaagaagagacgagaagctgtgtgcatcgtgctttctgatgacacatgctcagatgag
aagatccgcatgaacagggttgtccgcaacaacctgcgagtgcgcctgggggatgtcatc
agcatccagccgtgcccagatgtgaagtacggcaaacgtatccatgtgctgcccatcgat
gacacggtggaaggcatcaccggcaatctctttgaggtgtacctcaagccgtacttcctg
gaagcttatcgacctatccggaaaggtgacatcttccttgtccgtggtggaatgcgtgct
gtagagttcaaagtggtagagacagatcccagcccctattgcattgttgctccagataca
gtgatccattgtgaaggggaacccatcaaacgagaagatgaagaggaatctctcaatgaa
gtgggatatgatgatattggtggttgccggaaacagttggctcagataaaggaaatggtg
gagctgccactgagacatccagccctcttcaaggccattggtgtaaagcctcctcggggc
atcctgctctatgggcctcctgggacagggaagaccctgattgctcgagctgtggcaaat
gagactggtgcatttttctttctgatcaatggtcctgagattatgagcaagttggctggt
gagtcagagagcaacctgaggaaggcttttgaagaggcagagaagaatgctcctgccatc
attttcatcgatgagctggatgccattgctcccaagagagagaagacccatggagaagta
gaacgtcgaattgtgtcacagctattgactctcatggatggtttgaagcagagggcacat
gtgatcgttatggcagcaaccaacagacccaacagcattgatccagctcttagacgattt
ggtcgatttgacagggaggtggatattggaattcctgatgccactggacgcttggagatc
ctgcagatccatactaagaacatgaagctggcagatgatgtagacctagaacaggtagcc
aatgagacccatggacatgtaggtgctgatctggcagccctctgctcagaggcagccctg
caggccattcgaaagaagatggatctcattgacttggaggatgagaccattgatgctgaa
gtcatgaactccctggctgtcaccatggatgacttccggtgggccctgagccagagcaat
ccatcagcacttcgggagactgttgttgaagtgccacaggtgacctgggaggacatcggt
gggctggaggatgtcaagcgggaactccaagagcttgttcagtaccctgtggagcaccca
gacaagttcctcaagttcggtatgacaccttccaagggagtcctgttctacggaccccct
ggctgtgggaaaactttattggccaaagctatcgccaatgaatgccaggcaaatttcatc
tccatcaagggccctgaacttctcaccatgtggtttggagagtctgaggccaatgtccgt
gagatatttgacaaggcccgccaagctgccccttgcgttctgttctttgatgaactggat
tcgattgctaaggctcgtggtggcaacattggagatggaggaggtgctgctgacagagtc
atcaatcagatcttgacagagatggatggtatgtccaccaagaaaaatgtattcatcatt
ggtgccactaaccggcctgatatcattgaccctgcaattcttcgacctggccgcttggac
cagctcatctacatacccctgcctgatgaaaagtcccgtgttgcaatccttaaggccaac
ctgaggaagtcgcctgttgccaaggatgtagacttagagttcctggccaagatgactaat
ggcttctctggggctgacctgacagagatctgccagcgtgcttgcaaactggctatccgt
gagtccattgaaagtgaaatccgacgagagcgggaaaggcagaccaacccctctgccatg
gaggtagaagaggatgacccagtccctgagatccgccgggaccactttgaggaggccatg
cgctttgctcgccgttctgtcagtgacaatgacatccggaaatatgagatgtttgcccaa
acccttcagcagagcaggggctttggcagcttcagattcccctcagggaaccaaggcggg
gctggccccagccagggcagtggaggaggctcaggcggcaacgtgtacacggaagacaat
gatgatgacctgtatggctaa
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