Monodelphis domestica (gray short-tailed opossum): 100020988
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Entry
100020988 CDS
T01031
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100020988 (NPAS1)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100020988 (NPAS1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
100020988
NCBI-ProteinID:
XP_016288777
Ensembl:
ENSMODG00000009053
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All DBs
Position
4:complement(386061679..386077511)
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AA seq
659 aa
AA seq
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MAAPFSGSEVKCVSVEWDFLQGLLVKAPPVPCLQALRKEKSRNAARSRRGKENFEFYELA
KTLPLPSAITSQLDKASIVRLSITYLRLRDFAALGDPPWTPPRADLSPAPVSGAPGRRES
SAFLTDLFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYV
HPGDHSEVLEQLGLKAPPPGPGAPLYGPSSSSSSSSASSNSEAPETELGPPVLTPRNQPG
LLDRSFFIRMKSTLTKRGLHLKASGYKVIHVTGRLRTQLLTTRRGQVLGLVALGHTLPPA
PLSELPLHGHTLVFRLSLALTIISCESRISDYMDVGPSELIGRSCYQFIHGEDVAGVRQS
HLDLLDKGQVVTGYYRWLQRAGGFVWLQSVATVAISGKSPGERHVVWVSYILSQVESSHV
VLDAFQLPRTGPQEDLSDPEPEIKGTWSATEEGSGGDGPSLETPGGNFLPEPKAQVEGEP
GAPQPESGARHPRGKRIKLEPARGGGGGGRSSSSSSSSSSQGEAPGGGGEGGDDSDEEEP
SLPAPRPEFTSVIRAGSLKREGLRPWSFAASYPAREPFHRPPSPPDSPSPPALVHAGYLA
PGRGLYTSTIRYGPAELGLALPSPGLVYQHLQRLSGPGPAFPDTLYPSVPFLGPDRKGD
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccttctcaggaagcgaggtcaagtgcgtcagcgtcgagtgggacttcctg
cagggcctgttggtcaaagccccgcctgtgccctgtctgcaggccttgcggaaggagaag
tcccggaatgcggcccgctcccgccggggcaaagagaacttcgaattttatgagctggcg
aagacgctgcccctgcccagcgccatcacgagccagctggacaaggcgtccatcgtgcgg
ctcagcatcacctacctccgcctgcgggatttcgcagccctcggggacccaccctggact
ccaccccgagccgacctgtctccagcaccagtctctggcgctcctggaaggagagagagt
tctgccttcctcactgacctctttgaacagcatttgggaggccacattcttcagtcactg
gacgggttcgtgttcgccttgaaccaggagggcaagtttctctacatctcagagacagtt
tccatctatctgggcctctctcaggtggagctgactggaagcagcgtatttgactatgtg
catcccggggaccactcggaggtactggagcagcttgggctgaaggccccaccccctggg
cctggggcaccactctatggcccctcttcatcctcttcttcctcctcagcttcctccaac
tctgaggccccagagacggagctggggcctcctgtgctcactcctcggaatcagcctggc
cttcttgaccggtccttctttattcgaatgaaatccacactcaccaagagggggctgcat
ctcaaggcttcaggatacaaggtaattcacgtgactggccggcttcggacccagctgctg
acgacccgccggggccaagtgttgggtctcgtcgccctgggccacaccctgcccccagcc
ccactcagcgaactccccctgcacggccatactttggtcttccgcctcagcctggctttg
acgatcatctcctgtgagagcaggatcagtgactacatggatgtgggcccctcggaactg
attggacggagctgctaccagtttatccacggggaggacgtggctggagtccgccagagc
cacctggacttgctggacaaagggcaggtggtgacgggctactaccggtggctgcagagg
gccgggggcttcgtctggctccagtccgtggccacagtggccatcagtggcaagagccca
ggagagcggcacgtggtctgggtcagctacatcctcagtcaggtggaaagcagccacgtg
gtcttggacgctttccagcttccccgcactggcccccaagaggatctgtctgatccagaa
cctgagatcaaaggtacctggtcagctacagaggaagggtccgggggagacggcccctcc
ctggagaccccaggcggtaattttcttccagagcccaaggcccaggtggagggggagccg
ggagccccccagcctgagtccggggcccgccaccctcggggcaaacgcatcaaactggag
ccagcccgaggcggcggcggcggcggccggagcagcagcagcagcagcagcagcagcagc
cagggggaggccccgggcggcggtggcgaaggcggggatgacagtgatgaggaagagccc
agtctcccggcccccaggcccgagtttacttcggtcatccgcgctgggagcctgaagcga
gagggcctgaggccctggagctttgcagcctcctacccggcccgagagcccttccaccgg
cccccttcgcctcccgattccccatcccccccggctctggtccacgcgggttacttggcc
cctggcaggggcctctacaccagcacgatcagatacgggccggccgagctgggcctggca
ctccccagcccggggctggtctatcaacacctccagaggctcagcggcccagggccggcc
ttccccgacactctgtaccccagcgtgcccttcctgggcccggacaggaaaggggactga
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