Monodelphis domestica (gray short-tailed opossum): 100021233
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Entry
100021233 CDS
T01031
Symbol
PARPBP
Name
(RefSeq) PARP1 binding protein
KO
K27412
PCNA-interacting partner
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100021233 (PARPBP)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100021233 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
100021233 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD_C
OPA1_C
Motif
Other DBs
NCBI-GeneID:
100021233
NCBI-ProteinID:
XP_001373447
Ensembl:
ENSMODG00000002544
UniProt:
A0A5F8G9K5
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All DBs
Position
8:81778937..81860442
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AA seq
580 aa
AA seq
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MASFSENILDMIKSLRRNWHSLCPSERTTVCGADSMLLALQLSMAEINKQHSGEFTVSLS
DVLVTWKHLLHEKLGLPFEVMEVVEHYEDIRNTYGAFLKSSNMLDLIDVYQKCQTLTSTC
ENKVMSPVQLLDFLSGRSCVSDEDMNLSGSSSPISKCHLNNKKVQLIARKIICSYLTLLV
NSKNDLALAHIINIPDRGLGREAFTDLKHAARAKQMSVFQVATSFIRMIELGGKGYAPSP
SDPLRTHGKGLNNLIIFMDKLEEILGEIQNPRIAGGRILSAIKTELIKGRSSGDPFRQAT
EEVAQDLDLRIKNIINSQQEDRVVNTTGSSPARPKSHAINHGTAYCGRDMVKTLLVLLDE
EAANPPTGNKADLLYGDENTTSYAGIPILTLFSSPTQANEFVIKPLRERVQKSLEEKKVK
MKQTLIRSQFACTYKDDFMSSHDRCNDRNHSPEEPVCILRLQNDITEGMNSSVGVPTLGT
SSENVHLNRNKNEKISKKSSGQTGNKSPKRKQVDLNSDNNFCDHENELSRPQMGKIPKVS
SKLQNKLNQIPARSATKCCKPGTKNKLIAGQAKLTQFFRL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattttctgaaaatattttggatatgattaaaagcttgagaagaaattggcac
agcctttgtccttctgagaggaccactgtgtgtggtgctgattccatgctcttggctttg
cagctgtcaatggcagagatcaataaacagcactctggagaattcactgtctctcttagt
gatgtattggtgacttggaaacacttactacatgagaaactaggcttgccatttgaagtc
atggaagtggttgaacattatgaagatatcagaaacacctatggtgcttttttgaagagc
agcaacatgctggacctgattgatgtataccagaagtgtcaaacactgacctctacttgt
gagaataaagtgatgtctcctgtacaactattggatttcttatccggcagatcatgtgta
tctgatgaagatatgaatctttctggatcatcttctccaatcagtaaatgtcacttaaat
aataaaaaggtacagttaatagcaaggaaaattatctgttcatatttaaccctgttggtg
aattcaaagaatgacttagccttggctcatatcattaacattccggacagaggacttgga
agagaagccttcacggatctcaaacatgctgctcgagcaaagcaaatgtctgtcttccag
gttgccacctcattcattaggatgattgaacttggagggaaaggatatgcaccatcacca
tctgatcctctcaggacacatggaaagggattgaacaatttgattattttcatggacaaa
ttggaagaaattctaggagaaatacaaaatccaagaattgcagggggtcggatactctca
gcaataaagacagagctgataaaaggccgaagcagtggggatccatttcgtcaagcgact
gaggaagtggctcaggatttggatttgaggattaaaaacattatcaactctcaacaagaa
gacagagttgttaacaccactggcagcagtcctgcacgaccaaaatcccatgccattaat
catggcactgcatactgtggcagagatatggtgaaaactttacttgttctactggatgaa
gaagcagctaatcctcccacgggaaacaaagcagaccttttatatggggatgaaaacaca
acttcatatgccggcattcctatcctgacactttttagttctccaacacaagcaaatgaa
ttcgtgatcaaacccttaagagaacgtgttcagaagtctctggaagagaaaaaagtgaag
atgaaacaaaccttaataaggtcccaatttgcttgcacttacaaagatgatttcatgagc
agccatgacagatgcaacgataggaaccattccccagaagagccagtgtgtatacttcgc
ttgcaaaatgacatcacagaaggcatgaattcatctgttggagtaccaacccttggaaca
agttctgaaaatgttcatctgaacagaaataaaaatgaaaaaatatccaaaaaatcaagt
ggtcagacaggaaacaagagccccaagaggaaacaggtggatttgaacagtgacaataac
ttctgtgatcatgaaaatgagctatctcggcctcaaatgggtaagatacctaaggtgtcc
agcaaactacagaataaattgaatcaaattccagcaagatcagcaacaaaatgctgtaag
ccaggcaccaagaataaattgattgcagggcaggcaaaattaactcagttttttagactc
tga
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